RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 NAT16Q8N8M0 369 aa5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 CRELD1Q96HD1 420 aa5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 SPATA25Q9BR10 227 aa5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 ERVK13-1Q9NX77 482 aa5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 IMPACTQ9P2X3 320 aa5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 POLR3KQ9Y2Y1 108 aaPredicted RBP5.7□□□□□ -1.5
HDGFL3-202ENST00000562702 CCNFP41002 786 aa5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 ADAM17P78536 824 aa5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 FOXO4P98177 505 aa5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 SNW1Q13573 536 aaKnown RBP5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 CWF19L2Q2TBE0 894 aaKnown RBP5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 HLA-DQA1Q5Y7H0 255 aa5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 PAQR3Q6TCH7 311 aa5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 HOMEZQ8IX15 550 aa5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 FNIP1Q8TF40 1166 aa5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 TMEM74Q96NL1 305 aa5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 PRDM14Q9GZV8 571 aa5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 RNF38Q9H0F5 515 aa5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 GMIPQ9P107 970 aa5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 FBXL21Q9UKT6 434 aa5.69□□□□□ -1.5
HDGFL3-202ENST00000562702 ZNF205O95201 554 aa5.68□□□□□ -1.5
HDGFL3-202ENST00000562702 CYBBP04839 570 aa5.68□□□□□ -1.5
HDGFL3-202ENST00000562702 TNFRSF1AP19438 455 aa5.68□□□□□ -1.5
HDGFL3-202ENST00000562702 SAPCD2Q86UD0 394 aa5.68□□□□□ -1.5
HDGFL3-202ENST00000562702 GOLM1Q8NBJ4 401 aa5.68□□□□□ -1.5
HDGFL3-202ENST00000562702 MKRN2Q9H000 416 aaKnown RBP5.68□□□□□ -1.5
HDGFL3-202ENST00000562702 ANTXR1Q9H6X2 564 aa5.68□□□□□ -1.5
HDGFL3-202ENST00000562702 DBR1Q9UK59 544 aaKnown RBP5.68□□□□□ -1.5
HDGFL3-202ENST00000562702 PCDHB12Q9Y5F1 795 aa5.68□□□□□ -1.5
HDGFL3-202ENST00000562702 USP31Q70CQ4 1352 aa5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 SH3D21A4FU49 640 aa5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 MEIS1O00470 390 aa5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 DNAJA2O60884 412 aa5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 NCAM1P13591 858 aa5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 CNR2P34972 360 aa5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 ITGAEP38570 1179 aa5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 XPCQ01831 940 aaPredicted RBP5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 VWA3BQ502W6 1294 aa5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 CPZQ66K79 652 aa5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 CWF19L1Q69YN2 538 aaKnown RBP5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 RGS22Q8NE09 1264 aa5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 RSRP1Q9BUV0 290 aa5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 AP5S1Q9NUS5 200 aa5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 ROBO2Q9HCK4 1378 aa5.67□□□□□ -1.5
HDGFL3-202ENST00000562702 F6X3S4 739 aa5.66□□□□□ -1.5
HDGFL3-202ENST00000562702 SRGAP3O43295 1099 aa5.66□□□□□ -1.5
HDGFL3-202ENST00000562702 FSHBP01225 129 aa5.66□□□□□ -1.5
HDGFL3-202ENST00000562702 ITGB3P05106 788 aa5.66□□□□□ -1.5
HDGFL3-202ENST00000562702 VAV1P15498 845 aa5.66□□□□□ -1.5
HDGFL3-202ENST00000562702 BICRALQ6AI39 1079 aa5.66□□□□□ -1.5
HDGFL3-202ENST00000562702 DDX1Q92499 740 aaKnown RBP5.66□□□□□ -1.5
HDGFL3-202ENST00000562702 RHOVQ96L33 236 aa5.66□□□□□ -1.5
HDGFL3-202ENST00000562702 JMJD8Q96S16 334 aa5.66□□□□□ -1.5
HDGFL3-202ENST00000562702 GFOD1Q9NXC2 390 aa5.66□□□□□ -1.5
HDGFL3-202ENST00000562702 PRR13Q9NZ81 148 aa5.66□□□□□ -1.5
HDGFL3-202ENST00000562702 A0A1B0GTL3 188 aa5.65□□□□□ -1.5
HDGFL3-202ENST00000562702 GSNP06396 782 aa5.65□□□□□ -1.5
HDGFL3-202ENST00000562702 DBHP09172 617 aa5.65□□□□□ -1.5
HDGFL3-202ENST00000562702 FAM160A1Q05DH4 1040 aa5.65□□□□□ -1.5
HDGFL3-202ENST00000562702 CDCP2Q5VXM1 449 aa5.65□□□□□ -1.5
HDGFL3-202ENST00000562702 ADGRG2Q8IZP9 1017 aa5.65□□□□□ -1.5
HDGFL3-202ENST00000562702 TTC9BQ8N6N2 239 aa5.65□□□□□ -1.5
HDGFL3-202ENST00000562702 SLC16A11Q8NCK7 471 aa5.65□□□□□ -1.5
HDGFL3-202ENST00000562702 DSCC1Q9BVC3 393 aa5.65□□□□□ -1.5
HDGFL3-202ENST00000562702 PARP2Q9UGN5 583 aa5.65□□□□□ -1.5
HDGFL3-202ENST00000562702 PCDHB14Q9Y5E9 798 aa5.65□□□□□ -1.5
HDGFL3-202ENST00000562702 C1QTNF3-AMACRE9PGA6 284 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 F8W031 263 aaPredicted RBP5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 MATN3O15232 486 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 GDF5P43026 501 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 HMGA2P52926 109 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 DAB2P98082 770 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 MVKQ03426 396 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 CYP2R1Q6VVX0 501 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 FAM196AQ6ZSG2 479 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 SND1Q7KZF4 910 aaKnown RBP eCLIP5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 USP48Q86UV5 1035 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 CARFQ8N187 725 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 ZNF526Q8TF50 670 aaPredicted RBP5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 ZNF512BQ96KM6 892 aaPredicted RBP5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 SAMD11Q96NU1 681 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 LNPKQ9C0E8 428 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 PDLIM7Q9NR12 457 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 NTMQ9P121 344 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 MINPP1Q9UNW1 487 aa5.64□□□□□ -1.51
HDGFL3-202ENST00000562702 MINDY4BA8MYZ0 360 aa5.63□□□□□ -1.51
HDGFL3-202ENST00000562702 TLR3O15455 904 aaKnown RBP5.63□□□□□ -1.51
HDGFL3-202ENST00000562702 NOBOXO60393 691 aa5.63□□□□□ -1.51
HDGFL3-202ENST00000562702 ATE1O95260 518 aa5.63□□□□□ -1.51
HDGFL3-202ENST00000562702 PLA2G1BP04054 148 aaKnown RBP5.63□□□□□ -1.51
HDGFL3-202ENST00000562702 HTRA3P83110 453 aa5.63□□□□□ -1.51
HDGFL3-202ENST00000562702 OVOS1Q6IE37 1185 aa5.63□□□□□ -1.51
HDGFL3-202ENST00000562702 TTLL7Q6ZT98 887 aa5.63□□□□□ -1.51
HDGFL3-202ENST00000562702 NLRC3Q7RTR2 1065 aa5.63□□□□□ -1.51
HDGFL3-202ENST00000562702 CHST13Q8NET6 341 aa5.63□□□□□ -1.51
HDGFL3-202ENST00000562702 LOXL4Q96JB6 756 aa5.63□□□□□ -1.51
HDGFL3-202ENST00000562702 SORCS2Q96PQ0 1159 aa5.63□□□□□ -1.51
HDGFL3-202ENST00000562702 CNNM2Q9H8M5 875 aa5.63□□□□□ -1.51
HDGFL3-202ENST00000562702 GSTM1P09488 218 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms