RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 NONOQ15233 471 aaKnown RBP eCLIP13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 PTPAQ15257 358 aa13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 QRICH1Q2TAL8 776 aa13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 TTC38Q5R3I4 469 aa13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 TYW1BQ6NUM6 668 aa13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 ZNF579Q8NAF0 562 aaKnown RBP13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 ZNF280CQ8ND82 737 aa13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 RBM46Q8TBY0 533 aaKnown RBP13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 MRPS27Q92552 414 aaKnown RBP13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 C12orf42Q96LP6 360 aa13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 TAF1DQ9H5J8 278 aaPredicted RBP13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 RIC8AQ9NPQ8 531 aa13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 PCDHA6Q9UN73 950 aa13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 PCDHA8Q9Y5H6 950 aa13.53□□□□□ -0.24
AC087878.1-201ENST00000560709 TCHHQ07283 1943 aa13.52□□□□□ -0.24
AC087878.1-201ENST00000560709 PTPRAP18433 802 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 INPP5BP32019 993 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 TOB1P50616 345 aaPredicted RBP13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 BACE1P56817 501 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 MAP3K9P80192 1104 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 AP3B2Q13367 1082 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 FAM83BQ5T0W9 1011 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 PIK3AP1Q6ZUJ8 805 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 FBXO11Q86XK2 927 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 KRI1Q8N9T8 703 aaKnown RBP13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 FERMT2Q96AC1 680 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 PGBD1Q96JS3 809 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 FTOQ9C0B1 505 aaKnown RBP eCLIP13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 RANBP17Q9H2T7 1088 aaKnown RBP13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 CPVLQ9H3G5 476 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 PRR12Q9ULL5 1215 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 PCDHA7Q9UN72 937 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 PCDHA1Q9Y5I3 950 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 CSADQ9Y600 493 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 SSC5DA1L4H1 1573 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 ATAD5Q96QE3 1844 aa13.52□□□□□ -0.25
AC087878.1-201ENST00000560709 CTAGE5O15320 804 aa13.51□□□□□ -0.25
AC087878.1-201ENST00000560709 CMA1P23946 247 aa13.51□□□□□ -0.25
AC087878.1-201ENST00000560709 FAM160A1Q05DH4 1040 aa13.51□□□□□ -0.25
AC087878.1-201ENST00000560709 MAP3K11Q16584 847 aa13.51□□□□□ -0.25
AC087878.1-201ENST00000560709 ARL6IP4Q66PJ3 421 aaKnown RBP13.51□□□□□ -0.25
AC087878.1-201ENST00000560709 SPICE1Q8N0Z3 855 aa13.51□□□□□ -0.25
AC087878.1-201ENST00000560709 SAMD3Q8N6K7 520 aa13.51□□□□□ -0.25
AC087878.1-201ENST00000560709 PYM1Q9BRP8 204 aaKnown RBP13.51□□□□□ -0.25
AC087878.1-201ENST00000560709 PSTPIP2Q9H939 334 aa13.51□□□□□ -0.25
AC087878.1-201ENST00000560709 SCAF8Q9UPN6 1271 aaKnown RBP13.51□□□□□ -0.25
AC087878.1-201ENST00000560709 ABCB11O95342 1321 aa13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 FSD2A1L4K1 749 aa13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 FOSP01100 380 aaPredicted RBP13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 VEGFAP15692 232 aaPredicted RBP13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 PTPREP23469 700 aa13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 LRSAM1Q6UWE0 723 aa13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 NEK8Q86SG6 692 aa13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 CCAR1Q8IX12 1150 aaKnown RBP13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 PRPF38AQ8NAV1 312 aaKnown RBP13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 ANP32BQ92688 251 aaKnown RBP13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 CCDC34Q96HJ3 373 aa13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 NUP88Q99567 741 aaPredicted RBP13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 SLF1Q9BQI6 1058 aa13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 NUP62CLQ9H1M0 184 aa13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 TMOD4Q9NZQ9 345 aa13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 TMEM63CQ9P1W3 806 aa13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 PCDHB6Q9Y5E3 794 aa13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 SRPRBQ9Y5M8 271 aaKnown RBP13.5□□□□□ -0.25
AC087878.1-201ENST00000560709 MYPNQ86TC9 1320 aa13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 FAM237AA0A1B0GTK4 181 aa13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 ADM5C9JUS6 153 aa13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 KINO60870 393 aaKnown RBP13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 PPP1R11O60927 126 aaPredicted RBP13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 USP2O75604 605 aaPredicted RBP13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 GCFC2P16383 781 aaKnown RBP13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 CLK2P49760 499 aaKnown RBP13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 ATP2C1P98194 919 aaPredicted RBP13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 MTMR2Q13614 643 aa13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 SH3D19Q5HYK7 790 aa13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 AXDND1Q5T1B0 1012 aaPredicted RBP13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 ARMC9Q7Z3E5 817 aa13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 ANKRD13AQ8IZ07 590 aa13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 FSIP1Q8NA03 581 aa13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 COA7Q96BR5 231 aa13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 CDCA5Q96FF9 252 aa13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 MAF1Q9H063 256 aa13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 EHMT1Q9H9B1 1298 aa13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 FAM13BQ9NYF5 915 aa13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 MRPL11Q9Y3B7 192 aaKnown RBP13.49□□□□□ -0.25
AC087878.1-201ENST00000560709 PIK3CDO00329 1044 aa13.48□□□□□ -0.25
AC087878.1-201ENST00000560709 VCAM1P19320 739 aa13.48□□□□□ -0.25
AC087878.1-201ENST00000560709 PRPHP41219 470 aa13.48□□□□□ -0.25
AC087878.1-201ENST00000560709 SPP2Q13103 211 aa13.48□□□□□ -0.25
AC087878.1-201ENST00000560709 ZYXQ15942 572 aaKnown RBP13.48□□□□□ -0.25
AC087878.1-201ENST00000560709 EAPPQ56P03 285 aaPredicted RBP13.48□□□□□ -0.25
AC087878.1-201ENST00000560709 EARS2Q5JPH6 523 aaKnown RBP13.48□□□□□ -0.25
AC087878.1-201ENST00000560709 KIAA1755Q5JYT7 1200 aa13.48□□□□□ -0.25
AC087878.1-201ENST00000560709 PRAMEF18Q5VWM3 479 aa13.48□□□□□ -0.25
AC087878.1-201ENST00000560709 MOXD1Q6UVY6 613 aa13.48□□□□□ -0.25
AC087878.1-201ENST00000560709 ZKSCAN4Q969J2 545 aaPredicted RBP13.48□□□□□ -0.25
AC087878.1-201ENST00000560709 TIGD1Q96MW7 591 aa13.48□□□□□ -0.25
AC087878.1-201ENST00000560709 GLIS2Q9BZE0 524 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms