RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TNFRSF10DQ9UBN6 386 aa4.82□□□□□ -1.64
SCFD1-213ENST00000554776 DIS3Q9Y2L1 958 aaKnown RBP4.82□□□□□ -1.64
SCFD1-213ENST00000554776 SF3B6Q9Y3B4 125 aaKnown RBP4.82□□□□□ -1.64
SCFD1-213ENST00000554776 LRRC10BA6NIK2 292 aa4.81□□□□□ -1.64
SCFD1-213ENST00000554776 FADS2P1A8MWK0 482 aa4.81□□□□□ -1.64
SCFD1-213ENST00000554776 NRDCO43847 1150 aa4.81□□□□□ -1.64
SCFD1-213ENST00000554776 STK10O94804 968 aaKnown RBP4.81□□□□□ -1.64
SCFD1-213ENST00000554776 EFEMP2O95967 443 aa4.81□□□□□ -1.64
SCFD1-213ENST00000554776 GTF2F1P35269 517 aaKnown RBP eCLIP4.81□□□□□ -1.64
SCFD1-213ENST00000554776 ZNF143P52747 638 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-213ENST00000554776 RAB33AQ14088 237 aa4.81□□□□□ -1.64
SCFD1-213ENST00000554776 NCAPHQ15003 741 aa4.81□□□□□ -1.64
SCFD1-213ENST00000554776 FXNQ16595 210 aa4.81□□□□□ -1.64
SCFD1-213ENST00000554776 MPZL3Q6UWV2 235 aa4.81□□□□□ -1.64
SCFD1-213ENST00000554776 NLRX1Q86UT6 975 aa4.81□□□□□ -1.64
SCFD1-213ENST00000554776 KRTAP1-3Q8IUG1 177 aa4.81□□□□□ -1.64
SCFD1-213ENST00000554776 FAM178BQ8IXR5 827 aa4.81□□□□□ -1.64
SCFD1-213ENST00000554776 ZNF513Q8N8E2 541 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-213ENST00000554776 RCC1LQ96I51 464 aaKnown RBP4.81□□□□□ -1.64
SCFD1-213ENST00000554776 FGD4Q96M96 766 aa4.81□□□□□ -1.64
SCFD1-213ENST00000554776 DNAJC2Q99543 621 aaKnown RBP4.81□□□□□ -1.64
SCFD1-213ENST00000554776 YBX2Q9Y2T7 364 aaKnown RBP4.81□□□□□ -1.64
SCFD1-213ENST00000554776 ANKRD34BA5PLL1 514 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 PSPNO60542 156 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 PPM1BO75688 479 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 GJB6O95452 261 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 GSTM1P09488 218 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 NOP2P46087 812 aaKnown RBP4.8□□□□□ -1.64
SCFD1-213ENST00000554776 POU4F1Q01851 419 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 RBL2Q08999 1139 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 MESP2Q0VG99 397 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 MLANAQ16655 118 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 DDR2Q16832 855 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 NBPF6Q5VWK0 638 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 PRR23BQ6ZRT6 265 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 CEP128Q6ZU80 1094 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 ADAT2Q7Z6V5 191 aaKnown RBP4.8□□□□□ -1.64
SCFD1-213ENST00000554776 SLCO6A1Q86UG4 719 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 CKAP2LQ8IYA6 745 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 ARHGEF39Q8N4T4 335 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 TMEM52Q8NDY8 209 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 ADCY4Q8NFM4 1077 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 NBPF4Q96M43 638 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 ZDHHC15Q96MV8 337 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 FCRL3Q96P31 734 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-213ENST00000554776 KRTAP4-12Q9BQ66 201 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 SLC6A17Q9H1V8 727 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 APEX2Q9UBZ4 518 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 CGGBP1Q9UFW8 167 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-213ENST00000554776 GPR160Q9UJ42 338 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 GPR55Q9Y2T6 319 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-213ENST00000554776 SHROOM4Q9ULL8 1493 aa4.8□□□□□ -1.64
SCFD1-213ENST00000554776 FGF10O15520 208 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-213ENST00000554776 FARP2O94887 1054 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-213ENST00000554776 CD3EP07766 207 aa4.79□□□□□ -1.64
SCFD1-213ENST00000554776 NAT2P11245 290 aa4.79□□□□□ -1.64
SCFD1-213ENST00000554776 RTP1P59025 263 aa4.79□□□□□ -1.64
SCFD1-213ENST00000554776 GRB10Q13322 594 aa4.79□□□□□ -1.64
SCFD1-213ENST00000554776 SERINC3Q13530 473 aa4.79□□□□□ -1.64
SCFD1-213ENST00000554776 PPP2R5DQ14738 602 aa4.79□□□□□ -1.64
SCFD1-213ENST00000554776 SLC14A2Q15849 920 aa4.79□□□□□ -1.64
SCFD1-213ENST00000554776 HSF5Q4G112 596 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-213ENST00000554776 IRF2BP1Q8IU81 584 aa4.79□□□□□ -1.64
SCFD1-213ENST00000554776 INTS4Q96HW7 963 aaKnown RBP4.79□□□□□ -1.64
SCFD1-213ENST00000554776 PLCD4Q9BRC7 762 aa4.79□□□□□ -1.64
SCFD1-213ENST00000554776 GOLGA2P5Q9HBQ8 144 aa4.79□□□□□ -1.64
SCFD1-213ENST00000554776 CRTAC1Q9NQ79 661 aa4.79□□□□□ -1.64
SCFD1-213ENST00000554776 MSRB2Q9Y3D2 182 aa4.79□□□□□ -1.64
SCFD1-213ENST00000554776 R3HCC1Q9Y3T6 440 aaKnown RBP4.79□□□□□ -1.64
SCFD1-213ENST00000554776 A0A1W2PQ45 241 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-213ENST00000554776 A0A1W2PQY0 241 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 WTIPA6NIX2 430 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-213ENST00000554776 AURKAO14965 403 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 SUSD5O60279 629 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 DDAH1O94760 285 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 IFNGR1P15260 489 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 ZNF648Q5T619 568 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-213ENST00000554776 RCSD1Q6JBY9 416 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 GALNT18Q6P9A2 607 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 CYP2R1Q6VVX0 501 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 UBXN4Q92575 508 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 FAM84AQ96KN4 292 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 APBA2Q99767 749 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 MCMBPQ9BTE3 642 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 HIRIP3Q9BW71 556 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-213ENST00000554776 NSUN3Q9H649 340 aaKnown RBP4.78□□□□□ -1.64
SCFD1-213ENST00000554776 ST7Q9NRC1 585 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 SUGT1Q9Y2Z0 365 aa4.78□□□□□ -1.64
SCFD1-213ENST00000554776 VAMP4O75379 141 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 C8AP07357 584 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 GALK1P51570 392 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 AMPD2Q01433 879 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 HLA-DQA1Q5Y7H0 255 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 NAT16Q8N8M0 369 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 FBXO15Q8NCQ5 510 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-213ENST00000554776 BVESQ8NE79 360 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 PMFBP1Q8TBY8 1022 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 PTCHD1Q96NR3 888 aa4.77□□□□□ -1.65
SCFD1-213ENST00000554776 JMJD8Q96S16 334 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms