RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 SLFN12Q8IYM2 578 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 OR8H2Q8N162 312 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 FAM43AQ8N2R8 423 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 PGBD4Q96DM1 585 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 SGCZQ96LD1 299 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 CENPOQ9BU64 300 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 RNF38Q9H0F5 515 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 SAMD15Q9P1V8 674 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 KLHL3Q9UH77 587 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 KCNH4Q9UQ05 1017 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 DIS3Q9Y2L1 958 aaKnown RBP4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 LRCH1Q9Y2L9 728 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 PTPN22Q9Y2R2 807 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 AFG3L2Q9Y4W6 797 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 PCDHGB6Q9Y5F9 930 aa4.74□□□□□ -1.65
RNU4-60P-201ENST00000517239 ERBB4Q15303 1308 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 CHURC1-FNTBB4DL54 471 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 C9IYK1 514 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 GFRA2O00451 464 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 TPP1O14773 563 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 TBX1O43435 398 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 PCDHGA12O60330 932 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 TLR5O60602 858 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 OFD1O75665 1012 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 APPP05067 770 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 EPHX1P07099 455 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 IFIT1P09914 478 aaKnown RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 HSD3B1P14060 373 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 MSX1P28360 303 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 POLR2BP30876 1174 aaKnown RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 GPC1P35052 558 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 RNF144AP50876 292 aaPredicted RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 PCDH1Q08174 1060 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 ZNF267Q14586 743 aaPredicted RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 ACAP2Q15057 778 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 CLUL1Q15846 466 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 ZNF423Q2M1K9 1284 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 RGL3Q3MIN7 710 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 FAM133BQ5BKY9 247 aaKnown RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 RRP12Q5JTH9 1297 aaKnown RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 WDR45BQ5MNZ6 344 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 PLA2G2CQ5R387 149 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 TDRD10Q5VZ19 366 aaKnown RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 ZCCHC8Q6NZY4 707 aaKnown RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 FAM180BQ6P0A1 224 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 C1orf122Q6ZSJ8 110 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 CCDC149Q6ZUS6 474 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 ADAT2Q7Z6V5 191 aaKnown RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 ZSCAN30Q86W11 494 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 KIF18BQ86Y91 864 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 MYCT1Q8N699 235 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 NAXEQ8NCW5 288 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 FAM156AQ8NDB6 213 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 SMC1BQ8NDV3 1235 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 IL17REQ8NFR9 667 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 BTN2A2Q8WVV5 523 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 PTPRN2Q92932 1015 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 PPM1MQ96MI6 270 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 TTC14Q96N46 770 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 NUP88Q99567 741 aaPredicted RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 CLEC4MQ9H2X3 399 aaPredicted RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 KIAA1586Q9HCI6 787 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 RIC8AQ9NPQ8 531 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 C14orf119Q9NWQ9 140 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 THG1LQ9NWX6 298 aaKnown RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 TLR7Q9NYK1 1049 aaKnown RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 RRN3Q9NYV6 651 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 APEX2Q9UBZ4 518 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 PCDHA4Q9UN74 947 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 ZKSCAN5Q9Y2L8 839 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 PCDHGA9Q9Y5G4 932 aaKnown RBP4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 PCDHGA8Q9Y5G5 932 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 PCDHGA7Q9Y5G6 932 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 PCDHGA6Q9Y5G7 932 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 PCDHGA3Q9Y5H0 932 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 PCDHGA2Q9Y5H1 932 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 PCDHA9Q9Y5H5 950 aa4.73□□□□□ -1.65
RNU4-60P-201ENST00000517239 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 KLHL33A6NCF5 533 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 NOP56O00567 594 aaKnown RBP4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 DDX3YO15523 660 aaKnown RBP4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 DLX3O60479 287 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 GAS7O60861 476 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 ULK1O75385 1050 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 CD2BP2O95400 341 aaKnown RBP4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 CRTAMO95727 393 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 GRK6P43250 576 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 LSM11P83369 360 aaKnown RBP eCLIP4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 ZNF252P-AS1Q0IIN9 211 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 TERF2Q15554 542 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 WIPI1Q5MNZ9 446 aaPredicted RBP4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 TSHZ3Q63HK5 1081 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 ADAMTSL4Q6UY14 1074 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 SRGAP1Q7Z6B7 1085 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 DDX53Q86TM3 631 aaKnown RBP4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 C11orf74Q86VG3 221 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 ANKLE2Q86XL3 938 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 ZBTB34Q8NCN2 500 aa4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 GIMAP8Q8ND71 665 aaPredicted RBP4.72□□□□□ -1.65
RNU4-60P-201ENST00000517239 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms