RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 IKQ13123 557 aaPredicted RBP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 ITGB3BPQ13352 177 aaPredicted RBP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 NNTQ13423 1086 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 EARS2Q5JPH6 523 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 AKAP4Q5JQC9 854 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 NBPF14Q5TI25 921 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 SPTY2D1Q68D10 685 aaPredicted RBP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 KRT40Q6A162 431 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 CCDC26Q8TAB7 109 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 JAKMIP2Q96AA8 810 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 PURBQ96QR8 312 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 MTFR1LQ9H019 292 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 ZCWPW1Q9H0M4 648 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 GBP3Q9H0R5 595 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 HOOK1Q9UJC3 728 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 COL18A1P39060 1754 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 EIF4E1BA6NMX2 242 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 F8W031 263 aaPredicted RBP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 ZBTB43O43298 467 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 NF2P35240 595 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 TUBP50607 506 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 FAM182BQ5T319 152 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 KDM7AQ6ZMT4 941 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 BZW1Q7L1Q6 419 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 BRAPQ7Z569 592 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 OR8K1Q8NGG5 319 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 TTF2Q9UNY4 1162 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 CAPN6Q9Y6Q1 641 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 MYH2Q9UKX2 1941 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 TTC26A0AVF1 554 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 NEURL1BA8MQ27 555 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 KIF3CO14782 793 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 N4BP3O15049 544 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 CLNS1AP54105 237 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 CCDC102BQ68D86 513 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 CYB5R4Q7L1T6 521 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 CYFIP2Q96F07 1278 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 ATP6V0A4Q9HBG4 840 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 ARHGEF10LQ9HCE6 1279 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 DDX21Q9NR30 783 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 SAR1BQ9Y6B6 198 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 CYP2D7A0A087X1C5 515 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 BTBD18B2RXH4 712 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 GPAA1O43292 621 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 CXCR5P32302 372 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 CARSP49589 748 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 RAB27AP51159 221 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 NCOA7Q8NI08 942 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 SDR42E1Q8WUS8 393 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 NAA15Q9BXJ9 866 aaKnown RBP9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 MMRN2Q9H8L6 949 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 PCDHB6Q9Y5E3 794 aa9.75□□□□□ -0.85
SMARCA1-203ENST00000371123 SIPA1L3O60292 1781 aaPredicted RBP9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 PLEKP08567 350 aaPredicted RBP9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 TMOD1P28289 359 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 MCM7P33993 719 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 SCTRP47872 440 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 ELF3P78545 371 aaPredicted RBP9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 IFNL2Q8IZJ0 200 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 EPSTI1Q96J88 318 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 TACO1Q9BSH4 297 aaKnown RBP9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 EBF2Q9HAK2 575 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 TMOD3Q9NYL9 352 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 ADAMTS3O15072 1205 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 PRKAB2O43741 272 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 SMNDC1O75940 238 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 FGAP02671 866 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 PMS1P54277 932 aaKnown RBP9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 TUBB2AQ13885 445 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 ZMYM1Q5SVZ6 1142 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 RNF187Q5TA31 235 aaPredicted RBP9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 MIS18BP1Q6P0N0 1132 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 SCLT1Q96NL6 688 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 TUBB2BQ9BVA1 445 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 PIDD1Q9HB75 910 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 ETAA1Q9NY74 926 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.74□□□□□ -0.852e-7■□□□□ 8.8
SMARCA1-203ENST00000371123 VPS54Q9P1Q0 977 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 SLC4A4Q9Y6R1 1079 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 LMO7Q8WWI1 1683 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 UBN2Q6ZU65 1347 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 STK36Q9NRP7 1315 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 NRAPQ86VF7 1730 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 WNK3Q9BYP7 1800 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 SHTN1A0MZ66 631 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 HGSO14964 777 aaPredicted RBP9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 PPP1R37O75864 691 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 MBD4O95243 580 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 ECHS1P30084 290 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 PEX19P40855 299 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 EIF6P56537 245 aaKnown RBP9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 CYP27A1Q02318 531 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 NR5A1Q13285 461 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 SH3RF1Q7Z6J0 888 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 KIAA1328Q86T90 577 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 DNAJC10Q8IXB1 793 aa9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 SPDYE1Q8NFV5 336 aaPredicted RBP9.74□□□□□ -0.85
SMARCA1-203ENST00000371123 OR2W6PQ8NHA6 318 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms