RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 GET4Q7L5D6 327 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 GJD3Q8N144 294 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 RNF34Q969K3 372 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 SHISA4Q96DD7 197 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 TRIM44Q96DX7 344 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 EPHX3Q9H6B9 360 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 AVENQ9NQS1 362 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 USP20Q9Y2K6 914 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 KCNMB2Q9Y691 235 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 INSRP06213 1382 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 AKAP11Q9UKA4 1901 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 FASNP49327 2511 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 CFAP47Q6ZTR5 3102 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 PIK3C2GO75747 1445 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 FER1L6Q2WGJ9 1857 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 A0A1W2PPC1 479 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 CAND2O75155 1236 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 DNAJA1P31689 397 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 TRIP4Q15650 581 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 MAP9Q49MG5 647 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 ODR4Q5SWX8 454 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 PIGBQ92521 554 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 DMRTB1Q96MA1 342 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 CEP89Q96ST8 783 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 CDX2Q99626 313 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 SLC30A3Q99726 388 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 APBA2Q99767 749 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 GSX2Q9BZM3 304 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 SLKQ9H2G2 1235 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 ZHX3Q9H4I2 956 aa4.31□□□□□ -1.72
ECHDC1-205ENST00000368295 CNTNAP4Q9C0A0 1308 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 ANKRD11Q6UB99 2663 aaPredicted RBP4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 PAX4O43316 350 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 DHX16O60231 1041 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 FKTNO75072 461 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 LDHAP00338 332 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 ARAFP10398 606 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 ENOX2Q16206 610 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 C8orf34Q49A92 452 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 LDLRAD1Q5T700 205 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 ZNF468Q5VIY5 522 aaPredicted RBP4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 PDE12Q6L8Q7 609 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 ZNF438Q7Z4V0 828 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 USP48Q86UV5 1035 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 CREBRFQ8IUR6 639 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 TMEM87AQ8NBN3 555 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 TMC1Q8TDI8 760 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 MYLIPQ8WY64 445 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 BHMTQ93088 406 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 ZNF333Q96JL9 665 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 FAM129BQ96TA1 746 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 IFT122Q9HBG6 1241 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 ASAP1Q9ULH1 1129 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 MON2Q7Z3U7 1717 aa4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 EIF3AQ14152 1382 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-205ENST00000368295 GOLGA6CA6NDK9 693 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 GOLGA6BA6NDN3 693 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 CBFA2T2O43439 604 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 MAP3K6O95382 1288 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 GOLGA6DP0CG33 693 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 RARAP10276 462 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 NFKB1P19838 968 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 PLEKHG4Q58EX7 1191 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 XKR5Q6UX68 686 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 ARMCX6Q7L4S7 300 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 KRT25Q7Z3Z0 450 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 UHRF1Q96T88 793 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 CDC5LQ99459 802 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 CDK19Q9BWU1 502 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 CHMP4BQ9H444 224 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 GOLGA6AQ9NYA3 693 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 HCN2Q9UL51 889 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 MKL2Q9ULH7 1088 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 TTF2Q9UNY4 1162 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 PTPN22Q9Y2R2 807 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 TTC21AQ8NDW8 1320 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 LTBP3Q9NS15 1303 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 COL4A5P29400 1685 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 KMT2BQ9UMN6 2715 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 SHTN1A0MZ66 631 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 H0YIN7 160 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 C2CD2LO14523 706 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 HSP90AB1P08238 724 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 ADH6P28332 368 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 GNALP38405 381 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 AMPD3Q01432 767 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 NHLH1Q02575 133 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 HLTFQ14527 1009 aaKnown RBP eCLIP4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 GRIN2CQ14957 1233 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 TTC39BQ5VTQ0 682 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 RASAL3Q86YV0 1011 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 PAF1Q8N7H5 531 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 GOLGA6L1Q8N7Z2 621 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 SNX29Q8TEQ0 813 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 C1QTNF1Q9BXJ1 281 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 GGNBP2Q9H3C7 697 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 ELP3Q9H9T3 547 aa4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 GDF2Q9UK05 429 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-205ENST00000368295 ZMYND8Q9ULU4 1186 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms