RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 WDR19Q8NEZ3 1342 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 PAF1Q8N7H5 531 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 IQCDQ96DY2 449 aa18.11■□□□□ 0.49
SCAF1-201ENST00000360565 NUCKS1Q9H1E3 243 aaKnown RBP18.11■□□□□ 0.49
SCAF1-201ENST00000360565 USP27XA6NNY8 438 aa18.1■□□□□ 0.49
SCAF1-201ENST00000360565 NCBP1Q09161 790 aaKnown RBP18.1■□□□□ 0.49
SCAF1-201ENST00000360565 ZNF658Q5TYW1 1059 aaPredicted RBP18.1■□□□□ 0.49
SCAF1-201ENST00000360565 CPLX4Q7Z7G2 160 aa18.1■□□□□ 0.49
SCAF1-201ENST00000360565 RDH13Q8NBN7 331 aa18.1■□□□□ 0.49
SCAF1-201ENST00000360565 SH2D4AQ9H788 454 aa18.1■□□□□ 0.49
SCAF1-201ENST00000360565 MROH2AA6NES4 1674 aa18.1■□□□□ 0.49
SCAF1-201ENST00000360565 CCDC169A6NNP5 214 aa18.1■□□□□ 0.49
SCAF1-201ENST00000360565 PLCB3Q01970 1234 aa18.1■□□□□ 0.49
SCAF1-201ENST00000360565 TPH2Q8IWU9 490 aa18.1■□□□□ 0.49
SCAF1-201ENST00000360565 TBCKQ8TEA7 893 aa18.1■□□□□ 0.49
SCAF1-201ENST00000360565 A0A0G2JLW4 131 aa18.1■□□□□ 0.49
SCAF1-201ENST00000360565 SPOPO43791 374 aa18.1■□□□□ 0.49
SCAF1-201ENST00000360565 FMNL3Q8IVF7 1028 aa18.1■□□□□ 0.49
SCAF1-201ENST00000360565 CCDC50Q8IVM0 306 aa18.1■□□□□ 0.49
SCAF1-201ENST00000360565 MTRF1LQ9UGC7 380 aaKnown RBP18.1■□□□□ 0.49
SCAF1-201ENST00000360565 DDX25Q9UHL0 483 aaKnown RBP18.1■□□□□ 0.49
SCAF1-201ENST00000360565 MAP2P11137 1827 aaKnown RBP18.1■□□□□ 0.49
SCAF1-201ENST00000360565 NDUFAB1O14561 156 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 BUB1O43683 1085 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 CYP2D6P10635 497 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 EEF1GP26641 437 aaKnown RBP18.09■□□□□ 0.49
SCAF1-201ENST00000360565 ALX1Q15699 326 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 FBXO38Q6PIJ6 1188 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 FAM196AQ6ZSG2 479 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 TMTC3Q6ZXV5 915 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 ENAHQ8N8S7 591 aaPredicted RBP18.09■□□□□ 0.49
SCAF1-201ENST00000360565 ARMCX3Q9UH62 379 aaPredicted RBP18.09■□□□□ 0.49
SCAF1-201ENST00000360565 TECPR2O15040 1411 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 CEP170BQ9Y4F5 1589 aaPredicted RBP18.09■□□□□ 0.49
SCAF1-201ENST00000360565 A0A1W2PRG0 241 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 EZRP15311 586 aaKnown RBP18.09■□□□□ 0.49
SCAF1-201ENST00000360565 SHC4Q6S5L8 630 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 JDP2Q8WYK2 163 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 SYNCQ9H7C4 482 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 PANK4Q9NVE7 773 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 MTUS1Q9ULD2 1270 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 PCDHA1Q9Y5I3 950 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 KDM3AQ9Y4C1 1321 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 GIMAP7Q8NHV1 300 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 FAM212AQ96EL1 285 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 XRCC5P13010 732 aaKnown RBP18.09■□□□□ 0.49
SCAF1-201ENST00000360565 POLR2FP61218 127 aaKnown RBP18.09■□□□□ 0.49
SCAF1-201ENST00000360565 CALCOCO2Q13137 446 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 IQCB1Q15051 598 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 PEX26Q7Z412 305 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 CCDC91Q7Z6B0 441 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 SGMS1Q86VZ5 419 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 LARP4BQ92615 738 aaKnown RBP18.09■□□□□ 0.49
SCAF1-201ENST00000360565 P2RX5Q93086 422 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 PIGSQ96S52 555 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 PAIP2Q9BPZ3 127 aaKnown RBP18.09■□□□□ 0.49
SCAF1-201ENST00000360565 BRIP1Q9BX63 1249 aa18.09■□□□□ 0.49
SCAF1-201ENST00000360565 OSBPL5Q9H0X9 879 aaPredicted RBP18.09■□□□□ 0.49
SCAF1-201ENST00000360565 STK36Q9NRP7 1315 aa18.08■□□□□ 0.49
SCAF1-201ENST00000360565 ACTN2P35609 894 aa18.08■□□□□ 0.49
SCAF1-201ENST00000360565 PTPROQ16827 1216 aa18.08■□□□□ 0.49
SCAF1-201ENST00000360565 DHX40Q8IX18 779 aaKnown RBP18.08■□□□□ 0.49
SCAF1-201ENST00000360565 CCDC77Q9BR77 488 aa18.08■□□□□ 0.49
SCAF1-201ENST00000360565 KCNF1Q9H3M0 494 aa18.08■□□□□ 0.49
SCAF1-201ENST00000360565 DDX41Q9UJV9 622 aaKnown RBP18.08■□□□□ 0.49
SCAF1-201ENST00000360565 UTYO14607 1347 aa18.08■□□□□ 0.49
SCAF1-201ENST00000360565 LAD1O00515 517 aa18.08■□□□□ 0.48
SCAF1-201ENST00000360565 FOXN1O15353 648 aa18.08■□□□□ 0.48
SCAF1-201ENST00000360565 PPP1R7Q15435 360 aa18.08■□□□□ 0.48
SCAF1-201ENST00000360565 GSTA5Q7RTV2 222 aa18.08■□□□□ 0.48
SCAF1-201ENST00000360565 DHTKD1Q96HY7 919 aaPredicted RBP18.08■□□□□ 0.48
SCAF1-201ENST00000360565 CUEDC2Q9H467 287 aa18.08■□□□□ 0.48
SCAF1-201ENST00000360565 PAK2Q13177 524 aa18.08■□□□□ 0.48
SCAF1-201ENST00000360565 AK8Q96MA6 479 aa18.08■□□□□ 0.48
SCAF1-201ENST00000360565 GDAQ9Y2T3 454 aa18.08■□□□□ 0.48
SCAF1-201ENST00000360565 CYP4A11Q02928 519 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 LRRC41Q15345 812 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 COA7Q96BR5 231 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 MINPP1Q9UNW1 487 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 GNA14O95837 355 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 CLCN6P51797 869 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 BIRC3Q13489 604 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 ARHGAP44Q17R89 818 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 CTTNBP2NLQ9P2B4 639 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 RWDD2AQ9UIY3 292 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 TSKSQ9UJT2 592 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 KIAA1024Q9UPX6 916 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 HYOU1Q9Y4L1 999 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 USP32Q8NFA0 1604 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 H0YIN7 160 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 NMT2O60551 498 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 KRT31Q15323 416 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 CERKLQ49MI3 558 aaPredicted RBP18.07■□□□□ 0.48
SCAF1-201ENST00000360565 SEL1L2Q5TEA6 688 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 CLEC4GQ6UXB4 293 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 MAGEF1Q9HAY2 307 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 TNS3Q68CZ2 1445 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 ABCC12Q96J65 1359 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 KRT5P13647 590 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 ADAM9Q13443 819 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms