RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 VPS16Q9H269 839 aa6.35□□□□□ -1.39
BRCA1-203ENST00000357654 QTRT2Q9H974 415 aaKnown RBP6.35□□□□□ -1.39
BRCA1-203ENST00000357654 PAG1Q9NWQ8 432 aa6.35□□□□□ -1.39
BRCA1-203ENST00000357654 F5H423 210 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-203ENST00000357654 INO80B-WBP1J3KQ70 363 aa6.35□□□□□ -1.39
BRCA1-203ENST00000357654 HS6ST3Q8IZP7 471 aa6.35□□□□□ -1.39
BRCA1-203ENST00000357654 ARHGAP18Q8N392 663 aa6.35□□□□□ -1.39
BRCA1-203ENST00000357654 SNX29Q8TEQ0 813 aa6.35□□□□□ -1.39
BRCA1-203ENST00000357654 INO80BQ9C086 356 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-203ENST00000357654 DENND2AQ9ULE3 1009 aa6.35□□□□□ -1.39
BRCA1-203ENST00000357654 LUC7L2Q9Y383 392 aaKnown RBP6.35□□□□□ -1.39
BRCA1-203ENST00000357654 USH1CQ9Y6N9 552 aa6.35□□□□□ -1.39
BRCA1-203ENST00000357654 MAST3O60307 1309 aa6.35□□□□□ -1.39
BRCA1-203ENST00000357654 DISP3Q9P2K9 1392 aa6.35□□□□□ -1.39
BRCA1-203ENST00000357654 F13A1P00488 732 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 TCF3P15923 654 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 GSDMDP57764 484 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 FAM182BQ5T319 152 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 NDE1Q9NXR1 346 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 IQANK1A0A1B0GTG1 560 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 ADCY5O95622 1261 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 BCAMP50895 628 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 GTF2A1P52655 376 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-203ENST00000357654 ANGPT1Q15389 498 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 TAF11Q15544 211 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 RINT1Q6NUQ1 792 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 VSIG1Q86XK7 387 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 DNAAF3Q8N9W5 541 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 SELENONQ9NZV5 590 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 FARP1Q9Y4F1 1045 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-203ENST00000357654 PSDA5PKW4 1024 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-203ENST00000357654 TFRCP02786 760 aaKnown RBP6.34□□□□□ -1.39
BRCA1-203ENST00000357654 SRGAP2BP0DMP2 458 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 IRF1P10914 325 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 PAMP19021 973 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 SSTR3P32745 418 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-203ENST00000357654 FAM47AQ5JRC9 791 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 TADA2BQ86TJ2 420 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 NDUFAF2Q8N183 169 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 DDX25Q9UHL0 483 aaKnown RBP6.34□□□□□ -1.39
BRCA1-203ENST00000357654 FBXL21Q9UKT6 434 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 ABCA5Q8WWZ7 1642 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 EFCAB14O75071 495 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 GPC4O75487 556 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 ANP32DO95626 131 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 FBXO31Q5XUX0 539 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-203ENST00000357654 RPAP2Q8IXW5 612 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-203ENST00000357654 BBOF1Q8ND07 529 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 MAIP1Q8WWC4 291 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 PPP2R3CQ969Q6 453 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 GSDMAQ96QA5 445 aa6.34□□□□□ -1.39
BRCA1-203ENST00000357654 SYT1P21579 422 aa6.34□□□□□ -1.4
BRCA1-203ENST00000357654 GARSP41250 739 aaKnown RBP6.34□□□□□ -1.4
BRCA1-203ENST00000357654 TOMM20Q15388 145 aa6.34□□□□□ -1.4
BRCA1-203ENST00000357654 CALCRLQ16602 461 aa6.34□□□□□ -1.4
BRCA1-203ENST00000357654 NBPF1Q3BBV0 1214 aa6.34□□□□□ -1.4
BRCA1-203ENST00000357654 AARS2Q5JTZ9 985 aaKnown RBP6.34□□□□□ -1.4
BRCA1-203ENST00000357654 ARMC6Q6NXE6 501 aa6.34□□□□□ -1.4
BRCA1-203ENST00000357654 MCF2L2Q86YR7 1114 aa6.34□□□□□ -1.4
BRCA1-203ENST00000357654 LEMD2Q8NC56 503 aa6.34□□□□□ -1.4
BRCA1-203ENST00000357654 APPL2Q8NEU8 664 aa6.34□□□□□ -1.4
BRCA1-203ENST00000357654 PPP1R9AQ9ULJ8 1098 aa6.34□□□□□ -1.4
BRCA1-203ENST00000357654 CCDC61Q9Y6R9 512 aa6.34□□□□□ -1.4
BRCA1-203ENST00000357654 PTPRCP08575 1304 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 CCDC85CA6NKD9 419 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 IGFBP4P22692 258 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 DYNLT1P63172 113 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 CTDSPL2Q05D32 466 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 HADHQ16836 314 aaKnown RBP6.33□□□□□ -1.4
BRCA1-203ENST00000357654 GLE1Q53GS7 698 aaKnown RBP6.33□□□□□ -1.4
BRCA1-203ENST00000357654 LRRC47Q8N1G4 583 aaKnown RBP6.33□□□□□ -1.4
BRCA1-203ENST00000357654 ANKRD49Q8WVL7 239 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 CCDC138Q96M89 665 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 TBC1D32Q96NH3 1257 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 SCUBE2Q9NQ36 999 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 GRXCR2A6NFK2 248 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 HOXD10P28358 340 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 ADCK5Q3MIX3 580 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 IRAK1BP1Q5VVH5 260 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 SCARA5Q6ZMJ2 495 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 CCDC127Q96BQ5 260 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 TACO1Q9BSH4 297 aaKnown RBP6.33□□□□□ -1.4
BRCA1-203ENST00000357654 HMGB1P1B2RPK0 211 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-203ENST00000357654 CEP104O60308 925 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 TFCP2Q12800 502 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 SLC9C1Q4G0N8 1177 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 TRIM68Q6AZZ1 485 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 MIGA2Q7L4E1 593 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 C16orf62Q7Z3J2 963 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 UHMK1Q8TAS1 419 aaKnown RBP6.33□□□□□ -1.4
BRCA1-203ENST00000357654 PPWD1Q96BP3 646 aaKnown RBP6.33□□□□□ -1.4
BRCA1-203ENST00000357654 EDEM3Q9BZQ6 932 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 EXO5Q9H790 373 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 CNOT7Q9UIV1 285 aaKnown RBP6.33□□□□□ -1.4
BRCA1-203ENST00000357654 RTL1A6NKG5 1358 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 FAM47DPA6NHR8 397 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 LRRC53A6NM62 1247 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 KIF28PB7ZC32 967 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 BMP15O95972 392 aa6.33□□□□□ -1.4
BRCA1-203ENST00000357654 BCRP11274 1271 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms