RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 DNAAF3Q8N9W5 541 aa17.9■□□□□ 0.46
PTCH1-201ENST00000331920 NCLNQ969V3 563 aa17.9■□□□□ 0.46
PTCH1-201ENST00000331920 CFAP36Q96G28 342 aa17.9■□□□□ 0.46
PTCH1-201ENST00000331920 CCDC141Q6ZP82 1450 aa17.9■□□□□ 0.46
PTCH1-201ENST00000331920 CYTH2Q99418 400 aa17.9■□□□□ 0.46
PTCH1-201ENST00000331920 C9orf84Q5VXU9 1444 aa17.9■□□□□ 0.46
PTCH1-201ENST00000331920 XRCC5P13010 732 aaKnown RBP17.9■□□□□ 0.46
PTCH1-201ENST00000331920 FAM133BQ5BKY9 247 aaKnown RBP17.9■□□□□ 0.46
PTCH1-201ENST00000331920 ZNF202O95125 648 aa17.89■□□□□ 0.46
PTCH1-201ENST00000331920 TCIRG1Q13488 830 aa17.89■□□□□ 0.46
PTCH1-201ENST00000331920 NLRX1Q86UT6 975 aa17.89■□□□□ 0.46
PTCH1-201ENST00000331920 ABHD8Q96I13 439 aa17.89■□□□□ 0.46
PTCH1-201ENST00000331920 MYCBPQ99417 103 aaPredicted RBP17.89■□□□□ 0.46
PTCH1-201ENST00000331920 TRAIPQ9BWF2 469 aa17.89■□□□□ 0.46
PTCH1-201ENST00000331920 FBXO41Q8TF61 875 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 KRT27Q7Z3Y8 459 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 TMTC1Q8IUR5 882 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 BTN2A2Q8WVV5 523 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 PAWRQ96IZ0 340 aaKnown RBP17.89■□□□□ 0.45
PTCH1-201ENST00000331920 SUGCTQ9HAC7 445 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 CPSF3Q9UKF6 684 aaKnown RBP17.89■□□□□ 0.45
PTCH1-201ENST00000331920 STRIP2Q9ULQ0 834 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 MYCP01106 439 aaPredicted RBP17.89■□□□□ 0.45
PTCH1-201ENST00000331920 IFT88Q13099 833 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 CCNYQ8ND76 341 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 TCP11Q8WWU5 503 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 PHACTR3Q96KR7 559 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 RPS6KC1Q96S38 1066 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 GOLGA8KD6RF30 607 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 ACTN1P12814 892 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 CABP7Q86V35 215 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 CERS3Q8IU89 383 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 MYL10Q9BUA6 226 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 BICC1Q9H694 974 aaKnown RBP17.89■□□□□ 0.45
PTCH1-201ENST00000331920 ESRRBO95718 433 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 BCAS4Q8TDM0 211 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 SNX19Q92543 992 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 ARHGEF1Q92888 912 aaKnown RBP17.89■□□□□ 0.45
PTCH1-201ENST00000331920 KIF17Q9P2E2 1029 aa17.89■□□□□ 0.45
PTCH1-201ENST00000331920 GAS7O60861 476 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 FBLN1P23142 703 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 ARPP19P56211 112 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 LRWD1Q9UFC0 647 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 TBK1Q9UHD2 729 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 DTNBO60941 627 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 TBC1D10BQ4KMP7 808 aaPredicted RBP17.88■□□□□ 0.45
PTCH1-201ENST00000331920 N4BP2L2Q92802 583 aaPredicted RBP17.88■□□□□ 0.45
PTCH1-201ENST00000331920 EFHD1Q9BUP0 239 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 ANKRD2Q9GZV1 360 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 NCOA2Q15596 1464 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 SRGAP2BP0DMP2 458 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 CTDSPL2Q05D32 466 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 MCF2P10911 925 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 PNOCQ13519 176 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 TRIM60Q495X7 471 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 RSRC2Q7L4I2 434 aaKnown RBP17.88■□□□□ 0.45
PTCH1-201ENST00000331920 TAGAPQ8N103 731 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 MMTAG2Q9BU76 263 aaKnown RBP17.88■□□□□ 0.45
PTCH1-201ENST00000331920 K7ENM7 598 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 ZSCAN9O15535 394 aaPredicted RBP17.88■□□□□ 0.45
PTCH1-201ENST00000331920 LMNAP02545 664 aaKnown RBP17.88■□□□□ 0.45
PTCH1-201ENST00000331920 ANO4Q32M45 955 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 GADL1Q6ZQY3 521 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 C1orf112Q9NSG2 853 aa17.88■□□□□ 0.45
PTCH1-201ENST00000331920 LMNB2Q03252 620 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 ATG16L1Q676U5 607 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 ABI1Q8IZP0 508 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 HESX1Q9UBX0 185 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 FAM135AQ9P2D6 1515 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 MAP3K7O43318 606 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 VCPP55072 806 aaKnown RBP17.87■□□□□ 0.45
PTCH1-201ENST00000331920 DYNLT1P63172 113 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 OCRLQ01968 901 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 ATG3Q9NT62 314 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 STK24Q9Y6E0 443 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 WDR97A6NE52 1622 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 CPP00450 1065 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 NSUN2Q08J23 767 aaKnown RBP eCLIP17.87■□□□□ 0.45
PTCH1-201ENST00000331920 LLGL1Q15334 1064 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 TRIM67Q6ZTA4 783 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 TTC1Q99614 292 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 MED4Q9NPJ6 270 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 SETD1BQ9UPS6 1966 aaKnown RBP17.87■□□□□ 0.45
PTCH1-201ENST00000331920 PRDM1O75626 825 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 TMED2Q15363 201 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 PCYT1AP49585 367 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 THOC5Q13769 683 aaKnown RBP17.87■□□□□ 0.45
PTCH1-201ENST00000331920 ZNF467Q7Z7K2 595 aaPredicted RBP17.87■□□□□ 0.45
PTCH1-201ENST00000331920 HIPK4Q8NE63 616 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 MAML1Q92585 1016 aa17.87■□□□□ 0.45
PTCH1-201ENST00000331920 SUN1O94901 812 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 B4GALNT2Q8NHY0 566 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 GSDMAQ96QA5 445 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 CBX8Q9HC52 389 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 POGZQ7Z3K3 1410 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 CCT5P48643 541 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 RNF207Q6ZRF8 634 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 EPRSP07814 1512 aaKnown RBP17.86■□□□□ 0.45
PTCH1-201ENST00000331920 PMLP29590 882 aa17.86■□□□□ 0.45
PTCH1-201ENST00000331920 NLRP12P59046 1061 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms