RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C GTT2Q12390 233 aa8.26□□□□□ -1.09
SRP54YPR088C SEM1O94742 89 aa8.25□□□□□ -1.09
SRP54YPR088C GAL11P19659 1081 aa8.25□□□□□ -1.09
SRP54YPR088C SIP2P34164 415 aaKnown RBP8.25□□□□□ -1.09
SRP54YPR088C PTH2P34222 208 aa8.25□□□□□ -1.09
SRP54YPR088C EAP1P36041 632 aaKnown RBP8.25□□□□□ -1.09
SRP54YPR088C ARP1P38696 384 aa8.25□□□□□ -1.09
SRP54YPR088C YHR045WP38775 560 aa8.25□□□□□ -1.09
SRP54YPR088C TIM17P39515 158 aa8.25□□□□□ -1.09
SRP54YPR088C FRT2P39734 528 aa8.25□□□□□ -1.09
SRP54YPR088C NNF2P53253 936 aa8.25□□□□□ -1.09
SRP54YPR088C IBD2P53892 351 aa8.25□□□□□ -1.09
SRP54YPR088C PEX13P80667 386 aa8.25□□□□□ -1.09
SRP54YPR088C NPL3Q01560 414 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
SRP54YPR088C LGE1Q02796 332 aaKnown RBP8.25□□□□□ -1.09
SRP54YPR088C GTB1Q04924 702 aa8.25□□□□□ -1.09
SRP54YPR088C HBT1Q07653 1046 aaKnown RBP8.25□□□□□ -1.09
SRP54YPR088C UPC2Q12151 913 aa8.25□□□□□ -1.09
SRP54YPR088C CET1O13297 549 aaPredicted RBP8.25□□□□□ -1.09
SRP54YPR088C FUS1P11710 512 aa8.25□□□□□ -1.09
SRP54YPR088C ART10P18634 518 aaKnown RBP8.25□□□□□ -1.09
SRP54YPR088C VAN1P23642 535 aa8.25□□□□□ -1.09
SRP54YPR088C MLS1P30952 554 aa8.25□□□□□ -1.09
SRP54YPR088C SFP1P32432 683 aa8.25□□□□□ -1.09
SRP54YPR088C TIP20P33891 701 aa8.25□□□□□ -1.09
SRP54YPR088C YKR023WP36119 530 aaKnown RBP8.25□□□□□ -1.09
SRP54YPR088C DBP8P38719 431 aa8.25□□□□□ -1.09
SRP54YPR088C PCL5P38794 229 aa8.25□□□□□ -1.09
SRP54YPR088C MEP1P40260 492 aa8.25□□□□□ -1.09
SRP54YPR088C COG7P53195 279 aa8.25□□□□□ -1.09
SRP54YPR088C EFM5P53200 248 aaKnown RBP8.25□□□□□ -1.09
SRP54YPR088C SWC4P53201 476 aa8.25□□□□□ -1.09
SRP54YPR088C HEL2Q05580 639 aaKnown RBP8.25□□□□□ -1.09
SRP54YPR088C CAR1P00812 333 aaKnown RBP8.24□□□□□ -1.09
SRP54YPR088C EPT1P22140 391 aa8.24□□□□□ -1.09
SRP54YPR088C RAD14P28519 371 aa8.24□□□□□ -1.09
SRP54YPR088C PMT1P33775 817 aa8.24□□□□□ -1.09
SRP54YPR088C FZO1P38297 855 aa8.24□□□□□ -1.09
SRP54YPR088C RIM11P38615 370 aa8.24□□□□□ -1.09
SRP54YPR088C UTP9P38882 575 aaKnown RBP8.24□□□□□ -1.09
SRP54YPR088C SER33P40510 469 aa8.24□□□□□ -1.09
SRP54YPR088C USE1P53146 245 aa8.24□□□□□ -1.09
SRP54YPR088C GTR2P53290 341 aa8.24□□□□□ -1.09
SRP54YPR088C NOP19P53317 196 aaPredicted RBP8.24□□□□□ -1.09
SRP54YPR088C CUS2P53830 285 aaPredicted RBP8.24□□□□□ -1.09
SRP54YPR088C CCE1Q03702 353 aa8.24□□□□□ -1.09
SRP54YPR088C SSL1Q04673 461 aaPredicted RBP8.24□□□□□ -1.09
SRP54YPR088C SMF3Q12078 473 aaPredicted RBP8.24□□□□□ -1.09
SRP54YPR088C ATG34Q12292 412 aa8.24□□□□□ -1.09
SRP54YPR088C AHA1Q12449 350 aaKnown RBP8.24□□□□□ -1.09
SRP54YPR088C PRP6P19735 899 aaPredicted RBP8.23□□□□□ -1.09
SRP54YPR088C SSE1P32589 693 aaKnown RBP8.23□□□□□ -1.09
SRP54YPR088C SPR1P32603 445 aa8.23□□□□□ -1.09
SRP54YPR088C TSC10P38342 320 aa8.23□□□□□ -1.09
SRP54YPR088C VMA13P41807 478 aaKnown RBP8.23□□□□□ -1.09
SRP54YPR088C NNF1P47149 201 aa8.23□□□□□ -1.09
SRP54YPR088C NUP84P52891 726 aa8.23□□□□□ -1.09
SRP54YPR088C NMA2P53204 395 aa8.23□□□□□ -1.09
SRP54YPR088C SHY1P53266 389 aa8.23□□□□□ -1.09
SRP54YPR088C YNR061CP53747 219 aa8.23□□□□□ -1.09
SRP54YPR088C GAS3Q03655 524 aa8.23□□□□□ -1.09
SRP54YPR088C TRM12Q04235 462 aa8.23□□□□□ -1.09
SRP54YPR088C JIP5Q06214 492 aaPredicted RBP8.23□□□□□ -1.09
SRP54YPR088C YPR084WQ06821 456 aa8.23□□□□□ -1.09
SRP54YPR088C VAM6Q07468 1049 aa8.23□□□□□ -1.09
SRP54YPR088C YDL121CQ07541 149 aa8.23□□□□□ -1.09
SRP54YPR088C OSW1Q08692 278 aa8.23□□□□□ -1.09
SRP54YPR088C MCD1Q12158 566 aa8.23□□□□□ -1.09
SRP54YPR088C CPA1P07258 411 aaKnown RBP8.22□□□□□ -1.09
SRP54YPR088C PWP1P21304 576 aaKnown RBP8.22□□□□□ -1.09
SRP54YPR088C GUT1P32190 709 aa8.22□□□□□ -1.09
SRP54YPR088C NUP120P35729 1037 aa8.22□□□□□ -1.09
SRP54YPR088C CUE2P36075 443 aaKnown RBP8.22□□□□□ -1.09
SRP54YPR088C SSN3P39073 555 aa8.22□□□□□ -1.09
SRP54YPR088C DHH1P39517 506 aaKnown RBP8.22□□□□□ -1.09
SRP54YPR088C SCS2P40075 244 aaKnown RBP8.22□□□□□ -1.09
SRP54YPR088C RLP7P40693 322 aaKnown RBP8.22□□□□□ -1.09
SRP54YPR088C YRB1P41920 201 aaKnown RBP8.22□□□□□ -1.09
SRP54YPR088C CCT7P42943 550 aaKnown RBP8.22□□□□□ -1.09
SRP54YPR088C GAT1P43574 510 aa8.22□□□□□ -1.09
SRP54YPR088C TDA7P53882 636 aaPredicted RBP8.22□□□□□ -1.09
SRP54YPR088C YNL010WP53981 241 aaKnown RBP8.22□□□□□ -1.09
SRP54YPR088C YML131WQ03102 365 aa8.22□□□□□ -1.09
SRP54YPR088C RIF2Q06208 395 aa8.22□□□□□ -1.09
SRP54YPR088C PHO84P25297 587 aaKnown RBP8.21□□□□□ -1.09
SRP54YPR088C YPT52P36018 234 aaKnown RBP8.21□□□□□ -1.09
SRP54YPR088C IML3P38265 245 aa8.21□□□□□ -1.09
SRP54YPR088C YHR020WP38708 688 aaKnown RBP8.21□□□□□ -1.09
SRP54YPR088C ARN1P38731 627 aa8.21□□□□□ -1.09
SRP54YPR088C YHL008CP38750 627 aa8.21□□□□□ -1.09
SRP54YPR088C HSE1P38753 452 aa8.21□□□□□ -1.09
SRP54YPR088C GDH3P39708 457 aa8.21□□□□□ -1.09
SRP54YPR088C LSB3P43603 459 aaKnown RBP8.21□□□□□ -1.09
SRP54YPR088C YJR154WP47181 346 aa8.21□□□□□ -1.09
SRP54YPR088C MAP1Q01662 387 aaKnown RBP RIP-Chip data8.21□□□□□ -1.09not detected
SRP54YPR088C CLU1Q03690 1277 aaKnown RBP8.21□□□□□ -1.09
SRP54YPR088C RPC11Q04307 110 aaPredicted RBP8.21□□□□□ -1.09
SRP54YPR088C GLO2Q05584 274 aa8.21□□□□□ -1.09
SRP54YPR088C RSC3Q06639 885 aa8.21□□□□□ -1.09
SRP54YPR088C RSR1P13856 272 aa8.21□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms