RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W SSA3P09435 649 aaKnown RBP5.08□□□□□ -1.6
SSO1YPL232W NAM9P27929 486 aa5.08□□□□□ -1.6
SSO1YPL232W YRO2P38079 344 aa5.08□□□□□ -1.6
SSO1YPL232W MPT5P39016 859 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
SSO1YPL232W SAW1P39735 261 aa5.08□□□□□ -1.6
SSO1YPL232W GIM4P40005 111 aaKnown RBP5.08□□□□□ -1.6
SSO1YPL232W GTS1P40956 396 aa5.08□□□□□ -1.6
SSO1YPL232W PHB1P40961 287 aa5.08□□□□□ -1.6
SSO1YPL232W YJL049WP47048 450 aa5.08□□□□□ -1.6
SSO1YPL232W EFM6P53970 246 aa5.08□□□□□ -1.6
SSO1YPL232W UME1Q03010 460 aa5.08□□□□□ -1.6
SSO1YPL232W NGL3Q03210 505 aa5.08□□□□□ -1.6
SSO1YPL232W ATG16Q03818 150 aa5.08□□□□□ -1.6
SSO1YPL232W BLS1Q06071 122 aa5.08□□□□□ -1.6
SSO1YPL232W YOR097CQ12274 175 aaPredicted RBP5.08□□□□□ -1.6
SSO1YPL232W GTT2Q12390 233 aa5.08□□□□□ -1.6
SSO1YPL232W AIM44Q99299 758 aa5.08□□□□□ -1.6
SSO1YPL232W GAL7P08431 366 aa5.07□□□□□ -1.6
SSO1YPL232W PCT1P13259 424 aa5.07□□□□□ -1.6
SSO1YPL232W CDC26P14724 124 aa5.07□□□□□ -1.6
SSO1YPL232W SEC65P29478 273 aa5.07□□□□□ -1.6
SSO1YPL232W DBF4P32325 704 aa5.07□□□□□ -1.6
SSO1YPL232W RPF2P36160 344 aaKnown RBP5.07□□□□□ -1.6
SSO1YPL232W DIA4P38705 446 aaPredicted RBP5.07□□□□□ -1.6
SSO1YPL232W ARG2P40360 574 aa5.07□□□□□ -1.6
SSO1YPL232W GAT1P43574 510 aa5.07□□□□□ -1.6
SSO1YPL232W VPS73P53142 486 aaKnown RBP5.07□□□□□ -1.6
SSO1YPL232W FDC1Q03034 503 aa5.07□□□□□ -1.6
SSO1YPL232W RLI1Q03195 608 aaKnown RBP5.07□□□□□ -1.6
SSO1YPL232W TRM12Q04235 462 aa5.07□□□□□ -1.6
SSO1YPL232W GRS2Q06817 618 aa5.07□□□□□ -1.6
SSO1YPL232W IRC13Q08630 104 aa5.07□□□□□ -1.6
SSO1YPL232W YLL056CQ12177 298 aa5.07□□□□□ -1.6
SSO1YPL232W GLT1Q12680 2145 aaKnown RBP5.07□□□□□ -1.6
SSO1YPL232W SWI5P08153 709 aa5.06□□□□□ -1.6
SSO1YPL232W SPS1P08458 490 aa5.06□□□□□ -1.6
SSO1YPL232W SLY1P22213 666 aa5.06□□□□□ -1.6
SSO1YPL232W GRR1P24814 1151 aa5.06□□□□□ -1.6
SSO1YPL232W YCR102CP25608 368 aa5.06□□□□□ -1.6
SSO1YPL232W BUB3P26449 341 aa5.06□□□□□ -1.6
SSO1YPL232W MKK1P32490 508 aa5.06□□□□□ -1.6
SSO1YPL232W MKK2P32491 506 aa5.06□□□□□ -1.6
SSO1YPL232W UTR2P32623 467 aa5.06□□□□□ -1.6
SSO1YPL232W ORC2P32833 620 aa5.06□□□□□ -1.6
SSO1YPL232W DEF1P35732 738 aaKnown RBP5.06□□□□□ -1.6
SSO1YPL232W ALG8P40351 577 aa5.06□□□□□ -1.6
SSO1YPL232W JHD2P47156 728 aaPredicted RBP5.06□□□□□ -1.6
SSO1YPL232W HSV2P50079 448 aaPredicted RBP5.06□□□□□ -1.6
SSO1YPL232W SGF73P53165 657 aa5.06□□□□□ -1.6
SSO1YPL232W FHN1P53279 174 aa5.06□□□□□ -1.6
SSO1YPL232W MRS2Q01926 470 aa5.06□□□□□ -1.6
SSO1YPL232W MTQ2Q03920 221 aaPredicted RBP5.06□□□□□ -1.6
SSO1YPL232W YLR287CQ05881 355 aa5.06□□□□□ -1.6
SSO1YPL232W NUT2Q06213 157 aa5.06□□□□□ -1.6
SSO1YPL232W OMS1Q06668 471 aa5.06□□□□□ -1.6
SSO1YPL232W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
SSO1YPL232W YOR342CQ12182 319 aa5.06□□□□□ -1.6
SSO1YPL232W WTM2Q12206 467 aa5.06□□□□□ -1.6
SSO1YPL232W PNO1Q99216 274 aaKnown RBP5.06□□□□□ -1.6
SSO1YPL232W AI3P03877 415 aa5.05□□□□□ -1.6
SSO1YPL232W RAD10P06838 210 aa5.05□□□□□ -1.6
SSO1YPL232W CDC4P07834 779 aa5.05□□□□□ -1.6
SSO1YPL232W TYR1P20049 452 aa5.05□□□□□ -1.6
SSO1YPL232W RSC6P25632 483 aa5.05□□□□□ -1.6
SSO1YPL232W SRP101P32916 621 aa5.05□□□□□ -1.6
SSO1YPL232W SFC1P33303 322 aa5.05□□□□□ -1.6
SSO1YPL232W STB6P36085 766 aa5.05□□□□□ -1.6
SSO1YPL232W SEA4P38164 1038 aa5.05□□□□□ -1.6
SSO1YPL232W MMS21P38632 267 aa5.05□□□□□ -1.6
SSO1YPL232W HIS2P38635 335 aa5.05□□□□□ -1.6
SSO1YPL232W SMC2P38989 1170 aaKnown RBP5.05□□□□□ -1.6
SSO1YPL232W SSN3P39073 555 aa5.05□□□□□ -1.6
SSO1YPL232W ALY2P47029 1046 aa5.05□□□□□ -1.6
SSO1YPL232W YGR021WP53212 290 aa5.05□□□□□ -1.6
SSO1YPL232W ATF2P53296 535 aa5.05□□□□□ -1.6
SSO1YPL232W YPR003CP53394 754 aa5.05□□□□□ -1.6
SSO1YPL232W PRO2P54885 456 aaKnown RBP5.05□□□□□ -1.6
SSO1YPL232W OSH6Q02201 448 aa5.05□□□□□ -1.6
SSO1YPL232W TPP1Q03796 238 aa5.05□□□□□ -1.6
SSO1YPL232W YDR278CQ05612 105 aa5.05□□□□□ -1.6
SSO1YPL232W VTA1Q06263 330 aa5.05□□□□□ -1.6
SSO1YPL232W HDA3Q06623 655 aa5.05□□□□□ -1.6
SSO1YPL232W ADY3Q07732 790 aa5.05□□□□□ -1.6
SSO1YPL232W HRK1Q08732 759 aaKnown RBP5.05□□□□□ -1.6
SSO1YPL232W AKR2Q12013 749 aa5.05□□□□□ -1.6
SSO1YPL232W HAL9Q12180 1030 aa5.05□□□□□ -1.6
SSO1YPL232W YOR012WQ12351 137 aa5.05□□□□□ -1.6
SSO1YPL232W YLR111WQ12528 110 aa5.05□□□□□ -1.6
SSO1YPL232W DYN1P36022 4092 aa5.04□□□□□ -1.6
SSO1YPL232W CMP2P14747 604 aa5.04□□□□□ -1.6
SSO1YPL232W BAS1P22035 811 aa5.04□□□□□ -1.6
SSO1YPL232W PRO1P32264 428 aa5.04□□□□□ -1.6
SSO1YPL232W MEI5P32489 222 aa5.04□□□□□ -1.6
SSO1YPL232W KAP122P32767 1081 aa5.04□□□□□ -1.6
SSO1YPL232W SFA1P32771 386 aa5.04□□□□□ -1.6
SSO1YPL232W MGM101P32787 269 aaKnown RBP5.04□□□□□ -1.6
SSO1YPL232W BLI1P35727 113 aa5.04□□□□□ -1.6
SSO1YPL232W CAB3P36076 571 aa5.04□□□□□ -1.6
SSO1YPL232W RIM11P38615 370 aa5.04□□□□□ -1.6
SSO1YPL232W YHR045WP38775 560 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms