RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W YLR456WQ06199 204 aa2.52□□□□□ -2.01
HRD3YLR207W VAM6Q07468 1049 aa2.52□□□□□ -2.01
HRD3YLR207W YDL086WQ07505 273 aa2.52□□□□□ -2.01
HRD3YLR207W IRC13Q08630 104 aa2.52□□□□□ -2.01
HRD3YLR207W EDE1P34216 1381 aa2.52□□□□□ -2.01
HRD3YLR207W YML002WP0CF17 737 aa2.52□□□□□ -2.01
HRD3YLR207W KES1P35844 434 aaKnown RBP2.52□□□□□ -2.01
HRD3YLR207W AUR1P36107 401 aaPredicted RBP2.52□□□□□ -2.01
HRD3YLR207W CTP1P38152 299 aa2.52□□□□□ -2.01
HRD3YLR207W OTU2P38747 307 aaKnown RBP2.52□□□□□ -2.01
HRD3YLR207W FMP10P40098 244 aa2.52□□□□□ -2.01
HRD3YLR207W ATF1P40353 525 aa2.52□□□□□ -2.01
HRD3YLR207W ROK1P45818 564 aaPredicted RBP2.52□□□□□ -2.01
HRD3YLR207W MDE1P47095 244 aa2.52□□□□□ -2.01
HRD3YLR207W AAD10P47182 288 aa2.52□□□□□ -2.01
HRD3YLR207W IRC4Q03036 179 aa2.52□□□□□ -2.01
HRD3YLR207W MUB1Q03162 620 aa2.52□□□□□ -2.01
HRD3YLR207W TLG1Q03322 224 aa2.52□□□□□ -2.01
HRD3YLR207W YDR239CQ03780 787 aa2.52□□□□□ -2.01
HRD3YLR207W DPB4Q04603 196 aaKnown RBP2.52□□□□□ -2.01
HRD3YLR207W ECM22Q05958 814 aaPredicted RBP2.52□□□□□ -2.01
HRD3YLR207W NKP2Q06162 153 aa2.52□□□□□ -2.01
HRD3YLR207W FMP45Q07651 309 aa2.52□□□□□ -2.01
HRD3YLR207W FRE5Q08908 694 aa2.52□□□□□ -2.01
HRD3YLR207W GPM3Q12326 303 aa2.52□□□□□ -2.01
HRD3YLR207W PNO1Q99216 274 aaKnown RBP2.52□□□□□ -2.01
HRD3YLR207W AFI1Q99222 893 aa2.52□□□□□ -2.01
HRD3YLR207W SSK22P25390 1331 aaPredicted RBP2.52□□□□□ -2.01
HRD3YLR207W PDE1P22434 369 aa2.51□□□□□ -2.01
HRD3YLR207W RRP43P25359 394 aaPredicted RBP2.51□□□□□ -2.01
HRD3YLR207W KRE2P27809 442 aa2.51□□□□□ -2.01
HRD3YLR207W LST4P34239 828 aa2.51□□□□□ -2.01
HRD3YLR207W PHO11P35842 467 aa2.51□□□□□ -2.01
HRD3YLR207W ELF1P36053 145 aa2.51□□□□□ -2.01
HRD3YLR207W STV1P37296 890 aa2.51□□□□□ -2.01
HRD3YLR207W YBR053CP38235 358 aa2.51□□□□□ -2.01
HRD3YLR207W PHO12P38693 467 aa2.51□□□□□ -2.01
HRD3YLR207W YHR218WP38899 603 aa2.51□□□□□ -2.01
HRD3YLR207W YEL057CP39983 233 aa2.51□□□□□ -2.01
HRD3YLR207W FMP52P40008 231 aa2.51□□□□□ -2.01
HRD3YLR207W RTT105P40063 208 aa2.51□□□□□ -2.01
HRD3YLR207W MET18P40469 1032 aa2.51□□□□□ -2.01
HRD3YLR207W EFM4P40516 257 aa2.51□□□□□ -2.01
HRD3YLR207W CCT7P42943 550 aaKnown RBP2.51□□□□□ -2.01
HRD3YLR207W YJL163CP46996 555 aa2.51□□□□□ -2.01
HRD3YLR207W COS12P53053 380 aa2.51□□□□□ -2.01
HRD3YLR207W BNI5P53890 448 aaKnown RBP2.51□□□□□ -2.01
HRD3YLR207W DAK1P54838 584 aaKnown RBP2.51□□□□□ -2.01
HRD3YLR207W STP3Q05937 343 aa2.51□□□□□ -2.01
HRD3YLR207W LUC7Q07508 261 aaPredicted RBP2.51□□□□□ -2.01
HRD3YLR207W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
HRD3YLR207W KEL3Q08979 651 aaPredicted RBP2.51□□□□□ -2.01
HRD3YLR207W TGS1Q12052 315 aa2.51□□□□□ -2.01
HRD3YLR207W SPE3Q12074 293 aaKnown RBP2.51□□□□□ -2.01
HRD3YLR207W CTF3Q12748 733 aa2.51□□□□□ -2.01
HRD3YLR207W YJR112W-AQ3E743 109 aa2.51□□□□□ -2.01
HRD3YLR207W TAO3P40468 2376 aa2.51□□□□□ -2.01
HRD3YLR207W DFR1P07807 211 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
HRD3YLR207W APE1P14904 514 aa2.51□□□□□ -2.01
HRD3YLR207W ERG4P25340 473 aa2.51□□□□□ -2.01
HRD3YLR207W SIP1P32578 815 aa2.51□□□□□ -2.01
HRD3YLR207W UBP13P38187 747 aa2.51□□□□□ -2.01
HRD3YLR207W PFF1P38244 976 aa2.51□□□□□ -2.01
HRD3YLR207W ERC1P38767 581 aa2.51□□□□□ -2.01
HRD3YLR207W YHR054CP38780 354 aa2.51□□□□□ -2.01
HRD3YLR207W MPT5P39016 859 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
HRD3YLR207W SLZ1P40167 298 aa2.51□□□□□ -2.01
HRD3YLR207W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
HRD3YLR207W AAT1Q01802 451 aa2.51□□□□□ -2.01
HRD3YLR207W RNT1Q02555 471 aa2.51□□□□□ -2.01
HRD3YLR207W TRM44Q02648 567 aaKnown RBP2.51□□□□□ -2.01
HRD3YLR207W EFR3Q03653 782 aaKnown RBP2.51□□□□□ -2.01
HRD3YLR207W YML037CQ03703 340 aa2.51□□□□□ -2.01
HRD3YLR207W BUD22Q04347 519 aaKnown RBP2.51□□□□□ -2.01
HRD3YLR207W INM2Q05533 292 aa2.51□□□□□ -2.01
HRD3YLR207W ARR3Q06598 404 aa2.51□□□□□ -2.01
HRD3YLR207W IZH3Q07959 543 aa2.51□□□□□ -2.01
HRD3YLR207W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
HRD3YLR207W USV1Q12132 391 aa2.51□□□□□ -2.01
HRD3YLR207W YER175W-AQ8TGU4 54 aa2.51□□□□□ -2.01
HRD3YLR207W NCB2Q92317 146 aa2.51□□□□□ -2.01
HRD3YLR207W PDR18P53756 1333 aa2.51□□□□□ -2.01
HRD3YLR207W GLT1Q12680 2145 aaKnown RBP2.51□□□□□ -2.01
HRD3YLR207W CET1O13297 549 aaPredicted RBP2.5□□□□□ -2.01
HRD3YLR207W PRE10P21242 288 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
HRD3YLR207W SPB1P25582 841 aaPredicted RBP2.5□□□□□ -2.01
HRD3YLR207W ERV1P27882 189 aa2.5□□□□□ -2.01
HRD3YLR207W LOT5P34234 306 aa2.5□□□□□ -2.01
HRD3YLR207W AGP2P38090 596 aa2.5□□□□□ -2.01
HRD3YLR207W CST26P38226 397 aa2.5□□□□□ -2.01
HRD3YLR207W CBR1P38626 284 aaKnown RBP2.5□□□□□ -2.01
HRD3YLR207W YHR097CP38809 366 aaKnown RBP2.5□□□□□ -2.01
HRD3YLR207W UBX6P47049 396 aa2.5□□□□□ -2.01
HRD3YLR207W YGR151CP53287 111 aa2.5□□□□□ -2.01
HRD3YLR207W DIP5P53388 608 aa2.5□□□□□ -2.01
HRD3YLR207W YNL058CP53947 316 aa2.5□□□□□ -2.01
HRD3YLR207W ERG5P54781 538 aa2.5□□□□□ -2.01
HRD3YLR207W NGL2Q03264 515 aaKnown RBP2.5□□□□□ -2.01
HRD3YLR207W YEH1Q07804 573 aa2.5□□□□□ -2.01
HRD3YLR207W CFT2Q12102 859 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms