RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C RHO3Q00245 231 aaKnown RBP3.54□□□□□ -1.84
VPS53YJL029C VPS16Q03308 798 aa3.54□□□□□ -1.84
VPS53YJL029C NHX1Q04121 633 aa3.54□□□□□ -1.84
VPS53YJL029C CMR1Q12510 522 aaKnown RBP3.54□□□□□ -1.84
VPS53YJL029C PET123P17558 318 aa3.54□□□□□ -1.84
VPS53YJL029C RPB10P22139 70 aa3.54□□□□□ -1.84
VPS53YJL029C URA10P30402 227 aa3.54□□□□□ -1.84
VPS53YJL029C SFP1P32432 683 aa3.54□□□□□ -1.84
VPS53YJL029C MF(ALPHA)2P32435 120 aa3.54□□□□□ -1.84
VPS53YJL029C RRP1P35178 278 aaPredicted RBP3.54□□□□□ -1.84
VPS53YJL029C RPC37P36121 282 aa3.54□□□□□ -1.84
VPS53YJL029C YBR259WP38338 688 aa3.54□□□□□ -1.84
VPS53YJL029C ATG36P46983 293 aa3.54□□□□□ -1.84
VPS53YJL029C ALY2P47029 1046 aa3.54□□□□□ -1.84
VPS53YJL029C TAH11P47112 604 aa3.54□□□□□ -1.84
VPS53YJL029C LSC1P53598 329 aaKnown RBP3.54□□□□□ -1.84
VPS53YJL029C TRS31Q03337 283 aa3.54□□□□□ -1.84
VPS53YJL029C VTA1Q06263 330 aa3.54□□□□□ -1.84
VPS53YJL029C RSC2Q06488 889 aa3.54□□□□□ -1.84
VPS53YJL029C SEN1Q00416 2231 aaKnown RBP3.54□□□□□ -1.84
VPS53YJL029C GPA2P10823 449 aa3.53□□□□□ -1.84
VPS53YJL029C URA7P28274 579 aaKnown RBP3.53□□□□□ -1.84
VPS53YJL029C MGE1P38523 228 aa3.53□□□□□ -1.84
VPS53YJL029C HSE1P38753 452 aa3.53□□□□□ -1.84
VPS53YJL029C SMF1P38925 575 aa3.53□□□□□ -1.84
VPS53YJL029C ACO2P39533 789 aa3.53□□□□□ -1.84
VPS53YJL029C SSU1P41930 458 aa3.53□□□□□ -1.84
VPS53YJL029C TIM13P53299 105 aa3.53□□□□□ -1.84
VPS53YJL029C YGR250CP53316 781 aaKnown RBP3.53□□□□□ -1.84
VPS53YJL029C URH1Q04179 340 aa3.53□□□□□ -1.84
VPS53YJL029C HSH49Q99181 213 aaPredicted RBP3.53□□□□□ -1.84
VPS53YJL029C MPH2P0CD99 609 aa3.53□□□□□ -1.84
VPS53YJL029C ATP12P22135 325 aa3.53□□□□□ -1.84
VPS53YJL029C PPH21P23594 369 aa3.53□□□□□ -1.84
VPS53YJL029C GID7P25569 745 aa3.53□□□□□ -1.84
VPS53YJL029C GCD6P32501 712 aaKnown RBP3.53□□□□□ -1.84
VPS53YJL029C TIP20P33891 701 aa3.53□□□□□ -1.84
VPS53YJL029C RPF2P36160 344 aaKnown RBP3.53□□□□□ -1.84
VPS53YJL029C HAT2P39984 401 aa3.53□□□□□ -1.84
VPS53YJL029C ALG8P40351 577 aa3.53□□□□□ -1.84
VPS53YJL029C GCD14P46959 383 aaPredicted RBP3.53□□□□□ -1.84
VPS53YJL029C NBP35P52920 328 aa3.53□□□□□ -1.84
VPS53YJL029C NRM1P53718 249 aa3.53□□□□□ -1.84
VPS53YJL029C ADE12P80210 433 aaKnown RBP3.53□□□□□ -1.84
VPS53YJL029C NOP6Q07623 225 aaKnown RBP3.53□□□□□ -1.84
VPS53YJL029C HRK1Q08732 759 aaKnown RBP3.53□□□□□ -1.84
VPS53YJL029C LDB17Q12342 491 aa3.53□□□□□ -1.84
VPS53YJL029C RMD5Q12508 421 aa3.53□□□□□ -1.84
VPS53YJL029C RMP1Q12530 201 aa3.53□□□□□ -1.84
VPS53YJL029C STT4P37297 1900 aa3.53□□□□□ -1.84
VPS53YJL029C TUB1P09733 447 aaKnown RBP3.52□□□□□ -1.85
VPS53YJL029C RPL1AP0CX43 217 aaKnown RBP3.52□□□□□ -1.85
VPS53YJL029C RPL1BP0CX44 217 aaKnown RBP3.52□□□□□ -1.85
VPS53YJL029C RSR1P13856 272 aa3.52□□□□□ -1.85
VPS53YJL029C KAR4P25583 335 aa3.52□□□□□ -1.85
VPS53YJL029C NFU1P32860 256 aa3.52□□□□□ -1.85
VPS53YJL029C PDR3P33200 976 aa3.52□□□□□ -1.85
VPS53YJL029C WBP1P33767 430 aaKnown RBP3.52□□□□□ -1.85
VPS53YJL029C OLA1P38219 394 aaKnown RBP3.52□□□□□ -1.85
VPS53YJL029C YBP1P38315 674 aa3.52□□□□□ -1.85
VPS53YJL029C YHR045WP38775 560 aa3.52□□□□□ -1.85
VPS53YJL029C PCL5P38794 229 aa3.52□□□□□ -1.85
VPS53YJL029C AXL2P38928 823 aa3.52□□□□□ -1.85
VPS53YJL029C SSN3P39073 555 aa3.52□□□□□ -1.85
VPS53YJL029C YEL073CP39974 107 aa3.52□□□□□ -1.85
VPS53YJL029C INA22P40576 216 aa3.52□□□□□ -1.85
VPS53YJL029C YPS6P40583 537 aa3.52□□□□□ -1.85
VPS53YJL029C COG6P53959 839 aa3.52□□□□□ -1.85
VPS53YJL029C RSM10Q03201 203 aa3.52□□□□□ -1.85
VPS53YJL029C EMI1Q04406 187 aa3.52□□□□□ -1.85
VPS53YJL029C CDC123Q05791 360 aa3.52□□□□□ -1.85
VPS53YJL029C VID22Q05934 901 aa3.52□□□□□ -1.85
VPS53YJL029C SLD7Q08457 257 aa3.52□□□□□ -1.85
VPS53YJL029C NUR1Q12066 484 aa3.52□□□□□ -1.85
VPS53YJL029C SKM1Q12469 655 aa3.52□□□□□ -1.85
VPS53YJL029C NOP14Q99207 810 aaKnown RBP3.52□□□□□ -1.85
VPS53YJL029C TOR1P35169 2470 aa3.52□□□□□ -1.85
VPS53YJL029C CYT1P07143 309 aa3.52□□□□□ -1.85
VPS53YJL029C RIP1P08067 215 aa3.52□□□□□ -1.85
VPS53YJL029C CUP1-1P0CX80 61 aa3.52□□□□□ -1.85
VPS53YJL029C CUP1-2P0CX81 61 aa3.52□□□□□ -1.85
VPS53YJL029C SNF5P18480 905 aa3.52□□□□□ -1.85
VPS53YJL029C YCL068CP25593 260 aa3.52□□□□□ -1.85
VPS53YJL029C PAP1P29468 568 aaKnown RBP3.52□□□□□ -1.85
VPS53YJL029C NTH1P32356 751 aa3.52□□□□□ -1.85
VPS53YJL029C ISC10P32645 267 aa3.52□□□□□ -1.85
VPS53YJL029C PRP18P33411 251 aaPredicted RBP3.52□□□□□ -1.85
VPS53YJL029C GLY1P37303 387 aaKnown RBP3.52□□□□□ -1.85
VPS53YJL029C YBR238CP38330 731 aaKnown RBP3.52□□□□□ -1.85
VPS53YJL029C TIM17P39515 158 aa3.52□□□□□ -1.85
VPS53YJL029C LTP1P40347 161 aa3.52□□□□□ -1.85
VPS53YJL029C IRR1P40541 1150 aa3.52□□□□□ -1.85
VPS53YJL029C ALA1P40825 983 aaKnown RBP3.52□□□□□ -1.85
VPS53YJL029C TES1P41903 349 aaKnown RBP3.52□□□□□ -1.85
VPS53YJL029C VPS60Q03390 229 aa3.52□□□□□ -1.85
VPS53YJL029C YMR027WQ04371 470 aa3.52□□□□□ -1.85
VPS53YJL029C YPQ2Q06328 317 aa3.52□□□□□ -1.85
VPS53YJL029C AI3P03877 415 aa3.51□□□□□ -1.85
VPS53YJL029C ILS1P09436 1072 aaKnown RBP3.51□□□□□ -1.85
VPS53YJL029C ADH4P10127 382 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms