RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W MSE1P48525 536 aa5□□□□□ -1.61
CDC4YFL009W YTP1P53584 459 aa5□□□□□ -1.61
CDC4YFL009W MRPL50P53724 139 aa5□□□□□ -1.61
CDC4YFL009W KTR5P53966 522 aaPredicted RBP5□□□□□ -1.61
CDC4YFL009W ATG16Q03818 150 aa5□□□□□ -1.61
CDC4YFL009W RRP17Q04031 235 aaPredicted RBP5□□□□□ -1.61
CDC4YFL009W NTG2Q08214 380 aa5□□□□□ -1.61
CDC4YFL009W SGT1Q08446 395 aa5□□□□□ -1.61
CDC4YFL009W YDR061WQ12298 539 aa5□□□□□ -1.61
CDC4YFL009W AI5_ALPHAQ9ZZX1 630 aa5□□□□□ -1.61
CDC4YFL009W ACE2P21192 770 aa4.99□□□□□ -1.61
CDC4YFL009W AEP2P22136 580 aa4.99□□□□□ -1.61
CDC4YFL009W MUD1P32605 298 aaKnown RBP4.99□□□□□ -1.61
CDC4YFL009W SRP101P32916 621 aa4.99□□□□□ -1.61
CDC4YFL009W PTK1P36002 662 aaPredicted RBP4.99□□□□□ -1.61
CDC4YFL009W YKL133CP36066 463 aa4.99□□□□□ -1.61
CDC4YFL009W ANR2P36090 516 aaPredicted RBP4.99□□□□□ -1.61
CDC4YFL009W ECM31P38122 312 aa4.99□□□□□ -1.61
CDC4YFL009W RRF1P38771 230 aa4.99□□□□□ -1.61
CDC4YFL009W ASG1P40467 964 aa4.99□□□□□ -1.61
CDC4YFL009W TED1P40533 473 aa4.99□□□□□ -1.61
CDC4YFL009W ALR2P43553 858 aa4.99□□□□□ -1.61
CDC4YFL009W IRC6P43615 237 aa4.99□□□□□ -1.61
CDC4YFL009W MDE1P47095 244 aa4.99□□□□□ -1.61
CDC4YFL009W CTR1P49573 406 aa4.99□□□□□ -1.61
CDC4YFL009W MET13P53128 600 aa4.99□□□□□ -1.61
CDC4YFL009W SNZ1Q03148 297 aa4.99□□□□□ -1.61
CDC4YFL009W SND1Q04007 877 aa4.99□□□□□ -1.61
CDC4YFL009W AIM33Q04516 312 aa4.99□□□□□ -1.61
CDC4YFL009W FMP45Q07651 309 aa4.99□□□□□ -1.61
CDC4YFL009W PUF3Q07807 879 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
CDC4YFL009W PEX15Q08215 383 aa4.99□□□□□ -1.61
CDC4YFL009W AVO1Q08236 1176 aa4.99□□□□□ -1.61
CDC4YFL009W YDL176WQ12027 708 aa4.99□□□□□ -1.61
CDC4YFL009W HBN1Q96VH4 193 aa4.99□□□□□ -1.61
CDC4YFL009W FLO11P08640 1367 aa4.99□□□□□ -1.61
CDC4YFL009W MRP2P10663 115 aaPredicted RBP4.98□□□□□ -1.61
CDC4YFL009W PFK1P16861 987 aaKnown RBP4.98□□□□□ -1.61
CDC4YFL009W DBP3P20447 523 aaKnown RBP4.98□□□□□ -1.61
CDC4YFL009W RPA135P22138 1203 aaKnown RBP4.98□□□□□ -1.61
CDC4YFL009W HXT2P23585 541 aa4.98□□□□□ -1.61
CDC4YFL009W DBP2P24783 546 aaKnown RBP4.98□□□□□ -1.61
CDC4YFL009W OCA4P25366 362 aa4.98□□□□□ -1.61
CDC4YFL009W ARE1P25628 610 aa4.98□□□□□ -1.61
CDC4YFL009W YKL107WP34251 309 aa4.98□□□□□ -1.61
CDC4YFL009W WHI3P34761 661 aaKnown RBP4.98□□□□□ -1.61
CDC4YFL009W MRPL17P36528 281 aa4.98□□□□□ -1.61
CDC4YFL009W KTR4P38131 464 aa4.98□□□□□ -1.61
CDC4YFL009W SWC5P38326 303 aa4.98□□□□□ -1.61
CDC4YFL009W MEF2P39677 819 aa4.98□□□□□ -1.61
CDC4YFL009W GPB2P39717 880 aa4.98□□□□□ -1.61
CDC4YFL009W SPC2Q04969 178 aa4.98□□□□□ -1.61
CDC4YFL009W YET3Q07451 203 aa4.98□□□□□ -1.61
CDC4YFL009W DTD1Q07648 150 aaKnown RBP4.98□□□□□ -1.61
CDC4YFL009W ALG6Q12001 544 aaKnown RBP4.98□□□□□ -1.61
CDC4YFL009W YOR342CQ12182 319 aa4.98□□□□□ -1.61
CDC4YFL009W GPM3Q12326 303 aa4.98□□□□□ -1.61
CDC4YFL009W ATG31Q12421 196 aa4.98□□□□□ -1.61
CDC4YFL009W CDC33P07260 213 aaKnown RBP4.98□□□□□ -1.61
CDC4YFL009W NFT1P0CE68 1218 aa4.98□□□□□ -1.61
CDC4YFL009W CDC24P11433 854 aaPredicted RBP4.98□□□□□ -1.61
CDC4YFL009W WHI2P12611 486 aa4.98□□□□□ -1.61
CDC4YFL009W GLN4P13188 809 aaKnown RBP4.98□□□□□ -1.61
CDC4YFL009W RPL8AP17076 256 aaKnown RBP4.98□□□□□ -1.61
CDC4YFL009W SFL1P20134 766 aa4.98□□□□□ -1.61
CDC4YFL009W PTC6P25646 442 aa4.98□□□□□ -1.61
CDC4YFL009W AFR1P33304 620 aa4.98□□□□□ -1.61
CDC4YFL009W GDH2P33327 1092 aaKnown RBP4.98□□□□□ -1.61
CDC4YFL009W MDJ1P35191 511 aa4.98□□□□□ -1.61
CDC4YFL009W MSS4P38994 779 aa4.98□□□□□ -1.61
CDC4YFL009W AGP3P43548 558 aa4.98□□□□□ -1.61
CDC4YFL009W MAD3P47074 515 aa4.98□□□□□ -1.61
CDC4YFL009W COS5P47187 383 aa4.98□□□□□ -1.61
CDC4YFL009W CGR1P53188 120 aa4.98□□□□□ -1.61
CDC4YFL009W TPO2P53283 614 aa4.98□□□□□ -1.61
CDC4YFL009W TEP1P53916 434 aa4.98□□□□□ -1.61
CDC4YFL009W BUL2Q03758 920 aaKnown RBP4.98□□□□□ -1.61
CDC4YFL009W UFO1Q04511 668 aa4.98□□□□□ -1.61
CDC4YFL009W VTA1Q06263 330 aa4.98□□□□□ -1.61
CDC4YFL009W FMP16Q12497 93 aa4.98□□□□□ -1.61
CDC4YFL009W YHR213W-AQ8TGT4 77 aa4.98□□□□□ -1.61
CDC4YFL009W URA3P03962 267 aa4.97□□□□□ -1.61
CDC4YFL009W KAR1P11927 433 aa4.97□□□□□ -1.61
CDC4YFL009W SNF4P12904 322 aa4.97□□□□□ -1.61
CDC4YFL009W CLB3P24870 427 aa4.97□□□□□ -1.61
CDC4YFL009W MEI4P29467 408 aa4.97□□□□□ -1.61
CDC4YFL009W YBL010CP32788 280 aa4.97□□□□□ -1.61
CDC4YFL009W MDL2P33311 773 aa4.97□□□□□ -1.61
CDC4YFL009W PIN4P34217 668 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
CDC4YFL009W YHI9P38765 294 aa4.97□□□□□ -1.61
CDC4YFL009W RCY1P39531 840 aa4.97□□□□□ -1.61
CDC4YFL009W FAR3P46671 204 aa4.97□□□□□ -1.61
CDC4YFL009W YGR111WP53265 400 aa4.97□□□□□ -1.61
CDC4YFL009W NOG2P53742 486 aaKnown RBP4.97□□□□□ -1.61
CDC4YFL009W ADE13Q05911 482 aaKnown RBP4.97□□□□□ -1.61
CDC4YFL009W GRX6Q12438 231 aa4.97□□□□□ -1.61
CDC4YFL009W RAD10P06838 210 aa4.97□□□□□ -1.61
CDC4YFL009W SPS1P08458 490 aa4.97□□□□□ -1.61
CDC4YFL009W RAP1P11938 827 aa4.97□□□□□ -1.61
CDC4YFL009W KGD1P20967 1014 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms