RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W GTR1Q00582 310 aa0.74□□□□□ -2.29
UTP20YBL004W RBS1Q05672 457 aaKnown RBP0.74□□□□□ -2.29
UTP20YBL004W NDE2Q07500 545 aa0.74□□□□□ -2.29
UTP20YBL004W WHI5Q12416 295 aa0.74□□□□□ -2.29
UTP20YBL004W MRC1P25588 1096 aa0.74□□□□□ -2.29
UTP20YBL004W UBC6P33296 250 aaPredicted RBP0.74□□□□□ -2.29
UTP20YBL004W FPR3P38911 411 aaKnown RBP0.74□□□□□ -2.29
UTP20YBL004W AYR1P40471 297 aa0.74□□□□□ -2.29
UTP20YBL004W YIR042CP40586 236 aa0.74□□□□□ -2.29
UTP20YBL004W TAX4P47030 604 aa0.74□□□□□ -2.29
UTP20YBL004W HFM1P51979 1187 aa0.74□□□□□ -2.29
UTP20YBL004W YNL193WP53870 558 aa0.74□□□□□ -2.29
UTP20YBL004W GTB1Q04924 702 aa0.74□□□□□ -2.29
UTP20YBL004W DIS3Q08162 1001 aaKnown RBP0.74□□□□□ -2.29
UTP20YBL004W PRS5Q12265 496 aaKnown RBP0.74□□□□□ -2.29
UTP20YBL004W DET1Q99288 334 aaKnown RBP0.74□□□□□ -2.29
UTP20YBL004W SCP160P06105 1222 aaKnown RBP RIP-Chip data0.73□□□□□ -2.29 RIP-Chip
UTP20YBL004W MRS3P10566 314 aa0.73□□□□□ -2.29
UTP20YBL004W ENA1P13587 1091 aa0.73□□□□□ -2.29
UTP20YBL004W MRPS5P33759 307 aa0.73□□□□□ -2.29
UTP20YBL004W LRG1P35688 1017 aa0.73□□□□□ -2.29
UTP20YBL004W YHR219WP38900 624 aa0.73□□□□□ -2.29
UTP20YBL004W SPC72P39723 622 aa0.73□□□□□ -2.29
UTP20YBL004W AIM14P53109 570 aa0.73□□□□□ -2.29
UTP20YBL004W ENA2Q01896 1091 aa0.73□□□□□ -2.29
UTP20YBL004W YPL108WQ02872 168 aaPredicted RBP0.73□□□□□ -2.29
UTP20YBL004W SFG1Q12507 346 aa0.73□□□□□ -2.29
UTP20YBL004W ENA5Q12691 1091 aa0.73□□□□□ -2.29
UTP20YBL004W MTR10Q99189 972 aa0.73□□□□□ -2.29
UTP20YBL004W YPL229WQ99395 206 aa0.73□□□□□ -2.29
UTP20YBL004W CPA2P03965 1118 aaKnown RBP0.73□□□□□ -2.29
UTP20YBL004W RPN3P40016 523 aaKnown RBP0.73□□□□□ -2.29
UTP20YBL004W GLG2P47011 380 aa0.73□□□□□ -2.29
UTP20YBL004W AQR1P53943 586 aa0.73□□□□□ -2.29
UTP20YBL004W RPA49Q01080 415 aaPredicted RBP0.73□□□□□ -2.29
UTP20YBL004W CLN2P20438 545 aa0.73□□□□□ -2.29
UTP20YBL004W RTG1P32607 177 aa0.73□□□□□ -2.29
UTP20YBL004W BUD13P46947 266 aaPredicted RBP0.73□□□□□ -2.29
UTP20YBL004W SPC105P53148 917 aa0.73□□□□□ -2.29
UTP20YBL004W SYF2P53277 215 aaPredicted RBP0.73□□□□□ -2.29
UTP20YBL004W ISR1Q06098 443 aaKnown RBP0.73□□□□□ -2.29
UTP20YBL004W NUT2Q06213 157 aa0.73□□□□□ -2.29
UTP20YBL004W PUS9Q12069 462 aa0.73□□□□□ -2.29
UTP20YBL004W TPO4Q12256 659 aa0.73□□□□□ -2.29
UTP20YBL004W YOR012WQ12351 137 aa0.73□□□□□ -2.29
UTP20YBL004W SWI5P08153 709 aa0.73□□□□□ -2.29
UTP20YBL004W PHO8P11491 566 aa0.73□□□□□ -2.29
UTP20YBL004W GAA1P39012 614 aa0.73□□□□□ -2.29
UTP20YBL004W AVT2P39981 480 aa0.73□□□□□ -2.29
UTP20YBL004W SPF1P39986 1215 aaKnown RBP0.73□□□□□ -2.29
UTP20YBL004W MDV1P47025 714 aa0.73□□□□□ -2.29
UTP20YBL004W ADO1P47143 340 aaKnown RBP0.73□□□□□ -2.29
UTP20YBL004W CTR9P89105 1077 aa0.73□□□□□ -2.29
UTP20YBL004W VTC3Q02725 835 aa0.73□□□□□ -2.29
UTP20YBL004W YPR114WQ06107 315 aa0.73□□□□□ -2.29
UTP20YBL004W FOB1O13329 566 aa0.73□□□□□ -2.29
UTP20YBL004W SEM1O94742 89 aa0.73□□□□□ -2.29
UTP20YBL004W RFA2P26754 273 aaKnown RBP0.73□□□□□ -2.29
UTP20YBL004W EMC3P36039 253 aa0.73□□□□□ -2.29
UTP20YBL004W STB6P36085 766 aa0.73□□□□□ -2.29
UTP20YBL004W FMP23P38231 175 aa0.73□□□□□ -2.29
UTP20YBL004W TOS3P43637 560 aa0.73□□□□□ -2.29
UTP20YBL004W YJR098CP47139 656 aa0.73□□□□□ -2.29
UTP20YBL004W ACS2P52910 683 aaKnown RBP0.73□□□□□ -2.29
UTP20YBL004W TRS31Q03337 283 aa0.73□□□□□ -2.29
UTP20YBL004W SHE9Q04172 456 aa0.73□□□□□ -2.29
UTP20YBL004W UTP21Q06078 939 aaPredicted RBP0.73□□□□□ -2.29
UTP20YBL004W PUS7Q08647 676 aaKnown RBP0.73□□□□□ -2.29
UTP20YBL004W LDB17Q12342 491 aa0.73□□□□□ -2.29
UTP20YBL004W RLF2Q12495 606 aa0.73□□□□□ -2.29
UTP20YBL004W GAL1P04385 528 aa0.72□□□□□ -2.29
UTP20YBL004W CUP2P15315 225 aa0.72□□□□□ -2.29
UTP20YBL004W SSE2P32590 693 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W MPE1P35728 441 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W YBR096WP38256 230 aa0.72□□□□□ -2.29
UTP20YBL004W YHL012WP38709 493 aa0.72□□□□□ -2.29
UTP20YBL004W BOL3P39724 118 aa0.72□□□□□ -2.29
UTP20YBL004W NBP1P52919 319 aaPredicted RBP0.72□□□□□ -2.29
UTP20YBL004W MRS2Q01926 470 aa0.72□□□□□ -2.29
UTP20YBL004W DFG5Q05031 458 aa0.72□□□□□ -2.29
UTP20YBL004W MRPL51Q06090 140 aaPredicted RBP0.72□□□□□ -2.29
UTP20YBL004W PIN3Q06449 215 aa0.72□□□□□ -2.29
UTP20YBL004W MTC4P38335 694 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W SIP4P46954 829 aa0.72□□□□□ -2.29
UTP20YBL004W PET130P47065 347 aa0.72□□□□□ -2.29
UTP20YBL004W RPM2Q02773 1202 aa0.72□□□□□ -2.29
UTP20YBL004W GAS3Q03655 524 aa0.72□□□□□ -2.29
UTP20YBL004W YOR387CQ08910 206 aa0.72□□□□□ -2.29
UTP20YBL004W YER190C-BP0CX94 160 aa0.72□□□□□ -2.29
UTP20YBL004W YEL077W-AP0CX95 160 aa0.72□□□□□ -2.29
UTP20YBL004W YGR296C-BP0CX96 160 aa0.72□□□□□ -2.29
UTP20YBL004W YPL283W-BP0CX97 160 aa0.72□□□□□ -2.29
UTP20YBL004W YPR204C-AP0CX98 160 aa0.72□□□□□ -2.29
UTP20YBL004W YFL068WP0CX99 160 aa0.72□□□□□ -2.29
UTP20YBL004W YLL066W-AP0CY00 160 aa0.72□□□□□ -2.29
UTP20YBL004W YLL067W-AP0CY01 160 aa0.72□□□□□ -2.29
UTP20YBL004W GLN4P13188 809 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W BMH2P34730 273 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W ECM31P38122 312 aa0.72□□□□□ -2.29
UTP20YBL004W UBP13P38187 747 aa0.72□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms