RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	AMPD3	Q01432	767 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	UBXN1	Q04323	297 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	MTF1	Q14872	753 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	ESCO1	Q5FWF5	840 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	FKBP15	Q5T1M5	1219 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	C10orf76	Q5T2E6	689 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	TBC1D10C	Q8IV04	446 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	IFNL3	Q8IZI9	196 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	ADSSL1	Q8N142	457 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	OTUD6B	Q8N6M0	293 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	NOA1	Q8NC60	698 aa	Known RBP	13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	BCAS4	Q8TDM0	211 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	NBPF3	Q9H094	633 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	EXOC1	Q9NV70	894 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	DONSON	Q9NYP3	566 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	STIM2	Q9P246	746 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	TNS3	Q68CZ2	1445 aa		13.12	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	LRP5	O75197	1615 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	ANKRD18B	A2A2Z9	1011 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	RHOBTB3	O94955	611 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	FGR	P09769	529 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	PRR29	P0C7W0	189 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	SLC8A1	P32418	973 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	GGCX	P38435	758 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	BIRC3	Q13489	604 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	NEDD9	Q14511	834 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	PUM3	Q15397	648 aa	Known RBP	13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	PPP2R5E	Q16537	467 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	LRRC24	Q50LG9	513 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	RRAGB	Q5VZM2	374 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	KIF6	Q6ZMV9	814 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	CATIP	Q7Z7H3	387 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	ZNF654	Q8IZM8	581 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	CEP120	Q8N960	986 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	NELFB	Q8WX92	580 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	SYMPK	Q92797	1274 aa	Known RBP	13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	CDC5L	Q99459	802 aa	Known RBP	13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	CCSER1	Q9C0I3	900 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	EPN3	Q9H201	632 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	EPC1	Q9H2F5	836 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	FER1L4	A9Z1Z3	1794 aa		13.11	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	GOLGA6L10	A6NI86	522 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236		B4E1Z4	1266 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	PDE8B	O95263	885 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	RPN1	P04843	607 aa	Known RBP	13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	APP	P05067	770 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	PARP1	P09874	1014 aa	Known RBP	13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	GNAQ	P50148	359 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	MTMR3	Q13615	1198 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	IFI16	Q16666	785 aa	Known RBP	13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	CFAP221	Q4G0U5	840 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	METTL24	Q5JXM2	366 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	TTC38	Q5R3I4	469 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	CFAP58	Q5T655	872 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	PDXDC2P	Q6P474	469 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	RUFY4	Q6ZNE9	571 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	IQCA1	Q86XH1	822 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	TRMT44	Q8IYL2	757 aa	Known RBP	13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	PHKB	Q93100	1093 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	CALR3	Q96L12	384 aa	Known RBP	13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	TTYH3	Q9C0H2	523 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	GPHN	Q9NQX3	736 aa	Predicted RBP	13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	ZSWIM5	Q9P217	1185 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	GUCA1B	Q9UMX6	200 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	PLAGL2	Q9UPG8	496 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	PCDHB6	Q9Y5E3	794 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	DOCK2	Q92608	1830 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	RIC1	Q4ADV7	1423 aa		13.1	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	BTNL10	A8MVZ5	291 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	ATP5J2-PTCD1	G3V325	749 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	NDUFAB1	O14561	156 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	DTNB	O60941	627 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	N4BP1	O75113	896 aa	Known RBP	13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	PTCD1	O75127	700 aa	Known RBP	13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	SLC5A1	P13866	664 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	IDE	P14735	1019 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	KIF5B	P33176	963 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	MNAT1	P51948	309 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	CUL1	Q13616	776 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	ACRBP	Q8NEB7	543 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	LRRC45	Q96CN5	670 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	CCDC42	Q96M95	316 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	TRERF1	Q96PN7	1200 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	SLF1	Q9BQI6	1058 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	IRX2	Q9BZI1	471 aa	Predicted RBP	13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	ZSWIM4	Q9H7M6	989 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	CABP5	Q9NP86	173 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	SWAP70	Q9UH65	585 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	AKAP11	Q9UKA4	1901 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	COL18A1	P39060	1754 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	ZNF532	Q9HCE3	1301 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	KIF13A	Q9H1H9	1805 aa		13.09	□□□□□ -0.31
U2AF1L4-221	ENST00000601236	TTC26	A0AVF1	554 aa		13.08	□□□□□ -0.32
U2AF1L4-221	ENST00000601236	AGPS	O00116	658 aa		13.08	□□□□□ -0.32
U2AF1L4-221	ENST00000601236	HNRNPH1	P31943	449 aa	Known RBP	13.08	□□□□□ -0.32
U2AF1L4-221	ENST00000601236	MCAM	P43121	646 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms