RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 MYZAPP0CAP1 466 aa19.32■□□□□ 0.68
PTPN21-208ENST00000556564 POLGP54098 1239 aaPredicted RBP19.32■□□□□ 0.68
PTPN21-208ENST00000556564 FAM160B1Q5W0V3 765 aa19.32■□□□□ 0.68
PTPN21-208ENST00000556564 BRIP1Q9BX63 1249 aa19.32■□□□□ 0.68
PTPN21-208ENST00000556564 NBPF3Q9H094 633 aa19.32■□□□□ 0.68
PTPN21-208ENST00000556564 AP5M1Q9H0R1 490 aa19.32■□□□□ 0.68
PTPN21-208ENST00000556564 PABPN1LA6NDY0 278 aaKnown RBP19.31■□□□□ 0.68
PTPN21-208ENST00000556564 CYP4A11Q02928 519 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 CCDC117Q8IWD4 279 aaPredicted RBP19.31■□□□□ 0.68
PTPN21-208ENST00000556564 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.31■□□□□ 0.68
PTPN21-208ENST00000556564 FRMPD1Q5SYB0 1578 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 TNFAIP3P21580 790 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 EP400NLQ6ZTU2 488 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 CCDC175P0C221 793 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 TNNI1P19237 187 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 CYP2J2P51589 502 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 HACE1Q8IYU2 909 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 SEPT9Q9UHD8 586 aaPredicted RBP19.31■□□□□ 0.68
PTPN21-208ENST00000556564 KRT26Q7Z3Y9 468 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 RASEFQ8IZ41 740 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 WRNIP1Q96S55 665 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 Q3C1V9 767 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 GALNT17Q6IS24 598 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 ZNF577Q9BSK1 485 aa19.31■□□□□ 0.68
PTPN21-208ENST00000556564 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.31■□□□□ 0.68
PTPN21-208ENST00000556564 K7ENM7 598 aa19.3■□□□□ 0.68
PTPN21-208ENST00000556564 CCND2P30279 289 aa19.3■□□□□ 0.68
PTPN21-208ENST00000556564 ZBTB8OSQ8IWT0 167 aa19.3■□□□□ 0.68
PTPN21-208ENST00000556564 SP8Q8IXZ3 490 aa19.3■□□□□ 0.68
PTPN21-208ENST00000556564 LZTFL1Q9NQ48 299 aa19.3■□□□□ 0.68
PTPN21-208ENST00000556564 PODNQ7Z5L7 613 aa19.3■□□□□ 0.68
PTPN21-208ENST00000556564 ZHX1Q9UKY1 873 aaPredicted RBP19.3■□□□□ 0.68
PTPN21-208ENST00000556564 ITSN1Q15811 1721 aa19.3■□□□□ 0.68
PTPN21-208ENST00000556564 KDM4FA0A1W2PPD8 638 aa19.3■□□□□ 0.68
PTPN21-208ENST00000556564 MAK16Q9BXY0 300 aaKnown RBP19.3■□□□□ 0.68
PTPN21-208ENST00000556564 MED14O60244 1454 aa19.3■□□□□ 0.68
PTPN21-208ENST00000556564 CYP2E1P05181 493 aaPredicted RBP19.3■□□□□ 0.68
PTPN21-208ENST00000556564 ASIC2Q16515 512 aa19.3■□□□□ 0.68
PTPN21-208ENST00000556564 CAPZA3Q96KX2 299 aa19.3■□□□□ 0.68
PTPN21-208ENST00000556564 LIG4P49917 911 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 LRMPQ12912 555 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 GRIPAP1Q4V328 841 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 GOLGA1Q92805 767 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 MAATS1Q7Z4T9 603 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 DNAI1Q9UI46 699 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 PCDHA4Q9UN74 947 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 PLEKHG2Q9H7P9 1386 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 FMNL1O95466 1100 aaPredicted RBP19.29■□□□□ 0.68
PTPN21-208ENST00000556564 FOXO4P98177 505 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 LRCH2Q5VUJ6 765 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 APOA5Q6Q788 366 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 FOXP4Q8IVH2 680 aaPredicted RBP19.29■□□□□ 0.68
PTPN21-208ENST00000556564 ZSWIM5Q9P217 1185 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 POTEB2H3BUK9 544 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 NLRP12P59046 1061 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 MRPS9P82933 396 aaKnown RBP19.29■□□□□ 0.68
PTPN21-208ENST00000556564 SESTD1Q86VW0 696 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 ANO3Q9BYT9 981 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 NRBP2Q9NSY0 501 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 PALM3A6NDB9 673 aaPredicted RBP19.29■□□□□ 0.68
PTPN21-208ENST00000556564 KRT86O43790 486 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 PANK4Q9NVE7 773 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 TAB2Q9NYJ8 693 aa19.29■□□□□ 0.68
PTPN21-208ENST00000556564 ITPK1Q13572 414 aa19.28■□□□□ 0.68
PTPN21-208ENST00000556564 NACA2Q9H009 215 aa19.28■□□□□ 0.68
PTPN21-208ENST00000556564 ZHX2Q9Y6X8 837 aa19.28■□□□□ 0.68
PTPN21-208ENST00000556564 CLIC6Q96NY7 704 aa19.28■□□□□ 0.68
PTPN21-208ENST00000556564 OSBPL3Q9H4L5 887 aa19.28■□□□□ 0.68
PTPN21-208ENST00000556564 ADD3Q9UEY8 706 aaKnown RBP19.28■□□□□ 0.68
PTPN21-208ENST00000556564 KIAA0754O94854 1291 aa19.28■□□□□ 0.68
PTPN21-208ENST00000556564 TRMT44Q8IYL2 757 aaKnown RBP19.28■□□□□ 0.68
PTPN21-208ENST00000556564 PCDHB13Q9Y5F0 798 aa19.28■□□□□ 0.68
PTPN21-208ENST00000556564 UBE2SQ16763 222 aa19.28■□□□□ 0.68
PTPN21-208ENST00000556564 RC3H1Q5TC82 1133 aaKnown RBP19.28■□□□□ 0.68
PTPN21-208ENST00000556564 IGSF22Q8N9C0 903 aa19.28■□□□□ 0.68
PTPN21-208ENST00000556564 ATP6V0A2Q9Y487 856 aa19.28■□□□□ 0.68
PTPN21-208ENST00000556564 LRRIQ4A6NIV6 560 aa19.27■□□□□ 0.68
PTPN21-208ENST00000556564 AKR1B15C9JRZ8 316 aaPredicted RBP19.27■□□□□ 0.68
PTPN21-208ENST00000556564 CDC37Q16543 378 aaPredicted RBP19.27■□□□□ 0.68
PTPN21-208ENST00000556564 FOSP01100 380 aaPredicted RBP19.27■□□□□ 0.68
PTPN21-208ENST00000556564 CKAP4Q07065 602 aaKnown RBP19.27■□□□□ 0.68
PTPN21-208ENST00000556564 PRR5LQ6MZQ0 368 aa19.27■□□□□ 0.68
PTPN21-208ENST00000556564 IKBKGQ9Y6K9 419 aa19.27■□□□□ 0.68
PTPN21-208ENST00000556564 TSNARE1Q96NA8 513 aa19.27■□□□□ 0.68
PTPN21-208ENST00000556564 SH2B2O14492 632 aaPredicted RBP19.27■□□□□ 0.68
PTPN21-208ENST00000556564 APOL6Q9BWW8 343 aa19.27■□□□□ 0.68
PTPN21-208ENST00000556564 AKT3Q9Y243 479 aa19.27■□□□□ 0.68
PTPN21-208ENST00000556564 CLIC4Q9Y696 253 aa19.27■□□□□ 0.68
PTPN21-208ENST00000556564 PI4K2BQ8TCG2 481 aa19.27■□□□□ 0.67
PTPN21-208ENST00000556564 SSX2IPQ9Y2D8 614 aa19.27■□□□□ 0.67
PTPN21-208ENST00000556564 PFKFB1P16118 471 aa19.26■□□□□ 0.67
PTPN21-208ENST00000556564 WDR70Q9NW82 654 aa19.26■□□□□ 0.67
PTPN21-208ENST00000556564 RASAL2Q9UJF2 1139 aa19.26■□□□□ 0.67
PTPN21-208ENST00000556564 HOXA13P31271 388 aaPredicted RBP19.26■□□□□ 0.67
PTPN21-208ENST00000556564 PTGDRQ13258 359 aa19.26■□□□□ 0.67
PTPN21-208ENST00000556564 PDCL2Q8N4E4 241 aa19.26■□□□□ 0.67
PTPN21-208ENST00000556564 ANKFY1Q9P2R3 1169 aa19.26■□□□□ 0.67
PTPN21-208ENST00000556564 TMOD1P28289 359 aa19.26■□□□□ 0.67
PTPN21-208ENST00000556564 APOBEC3FQ8IUX4 373 aaKnown RBP19.26■□□□□ 0.67
PTPN21-208ENST00000556564 AGTPBP1Q9UPW5 1226 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms