RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 ATF7IPQ6VMQ6 1270 aa5.89□□□□□ -1.47
LRCH3-214ENST00000473177 TMC4Q7Z404 712 aa5.89□□□□□ -1.47
LRCH3-214ENST00000473177 CCDC146Q8IYE0 955 aa5.89□□□□□ -1.47
LRCH3-214ENST00000473177 TMEM102Q8N9M5 508 aaPredicted RBP5.89□□□□□ -1.47
LRCH3-214ENST00000473177 PANK1Q8TE04 598 aa5.89□□□□□ -1.47
LRCH3-214ENST00000473177 WHAMMQ8TF30 809 aa5.89□□□□□ -1.47
LRCH3-214ENST00000473177 PLD4Q96BZ4 506 aa5.89□□□□□ -1.47
LRCH3-214ENST00000473177 RASSF4Q9H2L5 321 aa5.89□□□□□ -1.47
LRCH3-214ENST00000473177 ZNF408Q9H9D4 720 aa5.89□□□□□ -1.47
LRCH3-214ENST00000473177 NARFQ9UHQ1 456 aa5.89□□□□□ -1.47
LRCH3-214ENST00000473177 DDX49Q9Y6V7 483 aaKnown RBP5.89□□□□□ -1.47
LRCH3-214ENST00000473177 COL15A1P39059 1388 aa5.89□□□□□ -1.47
LRCH3-214ENST00000473177 TRAF5O00463 557 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 ZNF500O60304 480 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-214ENST00000473177 GADD45BO75293 160 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-214ENST00000473177 SMNDC1O75940 238 aaKnown RBP eCLIP5.88□□□□□ -1.47
LRCH3-214ENST00000473177 CELF2O95319 508 aaKnown RBP5.88□□□□□ -1.47
LRCH3-214ENST00000473177 GSK3AP49840 483 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 EIF6P56537 245 aaKnown RBP5.88□□□□□ -1.47
LRCH3-214ENST00000473177 ZNF445P59923 1031 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 ST5P78524 1137 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 MAP3K10Q02779 954 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 NUCB1Q02818 461 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 LMOD3Q0VAK6 560 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 NOGQ13253 232 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 GRM2Q14416 872 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 SUZ12Q15022 739 aaKnown RBP5.88□□□□□ -1.47
LRCH3-214ENST00000473177 AKAP4Q5JQC9 854 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 TAF3Q5VWG9 929 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 INTS5Q6P9B9 1019 aaKnown RBP5.88□□□□□ -1.47
LRCH3-214ENST00000473177 CCNJLQ8IV13 435 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 GPC2Q8N158 579 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 FAM184AQ8NB25 1140 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 JDP2Q8WYK2 163 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 NXPE3Q969Y0 559 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 BRIP1Q9BX63 1249 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 SRCIN1Q9C0H9 1055 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 BHLHE41Q9C0J9 482 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-214ENST00000473177 SMG9Q9H0W8 520 aaKnown RBP5.88□□□□□ -1.47
LRCH3-214ENST00000473177 EHD4Q9H223 541 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 PRDM6Q9NQX0 595 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 ZNF277Q9NRM2 450 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-214ENST00000473177 SMC4Q9NTJ3 1288 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 RNF19AQ9NV58 838 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 SOS1Q07889 1333 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-214ENST00000473177 ZNF831Q5JPB2 1677 aa5.88□□□□□ -1.47
LRCH3-214ENST00000473177 COL5A3P25940 1745 aaPredicted RBP5.88□□□□□ -1.47
LRCH3-214ENST00000473177 PDE2AO00408 941 aaPredicted RBP5.87□□□□□ -1.47
LRCH3-214ENST00000473177 CDC45O75419 566 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 RGS9O75916 674 aaPredicted RBP5.87□□□□□ -1.47
LRCH3-214ENST00000473177 ARHGEF15O94989 841 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 REC8O95072 547 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 ALBP02768 609 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 KIAA2012Q0VF49 1180 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 PSMD2Q13200 908 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 UVSSAQ2YD98 709 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 C1orf141Q5JVX7 400 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 CST9Q5W186 159 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 CEP135Q66GS9 1140 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 STYK1Q6J9G0 422 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 ZNF530Q6P9A1 599 aaPredicted RBP5.87□□□□□ -1.47
LRCH3-214ENST00000473177 CTU1Q7Z7A3 348 aaKnown RBP5.87□□□□□ -1.47
LRCH3-214ENST00000473177 SAPCD2Q86UD0 394 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 CHD1LQ86WJ1 897 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 ITPRIPQ8IWB1 547 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 CACTIN-AS1Q8N1I8 211 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 MICALL1Q8N3F8 863 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 CNBD1Q8NA66 436 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 GLIS3Q8NEA6 775 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 TNPO1Q92973 898 aaKnown RBP5.87□□□□□ -1.47
LRCH3-214ENST00000473177 HHIPL1Q96JK4 782 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 HHIPQ96QV1 700 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 TCF12Q99081 682 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 POP1Q99575 1024 aaKnown RBP5.87□□□□□ -1.47
LRCH3-214ENST00000473177 BCO2Q9BYV7 579 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 OSBPL7Q9BZF2 842 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 C12orf49Q9H741 205 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 LIN7BQ9HAP6 207 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 ENAMQ9NRM1 1142 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 NOL7Q9UMY1 257 aaKnown RBP5.87□□□□□ -1.47
LRCH3-214ENST00000473177 AK5Q9Y6K8 562 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 DLEC1Q9Y238 1755 aa5.87□□□□□ -1.47
LRCH3-214ENST00000473177 SCN4AP35499 1836 aa5.86□□□□□ -1.47
LRCH3-214ENST00000473177 ADAMTSL1Q8N6G6 1762 aa5.86□□□□□ -1.47
LRCH3-214ENST00000473177 NCAPD2Q15021 1401 aa5.86□□□□□ -1.47
LRCH3-214ENST00000473177 UNCXA6NJT0 531 aa5.86□□□□□ -1.47
LRCH3-214ENST00000473177 M0R082 166 aa5.86□□□□□ -1.47
LRCH3-214ENST00000473177 FYB1O15117 783 aa5.86□□□□□ -1.47
LRCH3-214ENST00000473177 EPB41L2O43491 1005 aaKnown RBP5.86□□□□□ -1.47
LRCH3-214ENST00000473177 LILRB5O75023 590 aa5.86□□□□□ -1.47
LRCH3-214ENST00000473177 TRPA1O75762 1119 aa5.86□□□□□ -1.47
LRCH3-214ENST00000473177 U2AF1L5P0DN76 240 aaPredicted RBP5.86□□□□□ -1.47
LRCH3-214ENST00000473177 MCCP23508 829 aa5.86□□□□□ -1.47
LRCH3-214ENST00000473177 VAMP1P23763 118 aa5.86□□□□□ -1.47
LRCH3-214ENST00000473177 DDIT3P35638 169 aa5.86□□□□□ -1.47
LRCH3-214ENST00000473177 IARSP41252 1262 aaKnown RBP5.86□□□□□ -1.47
LRCH3-214ENST00000473177 MTHFSP49914 203 aa5.86□□□□□ -1.47
LRCH3-214ENST00000473177 U2AF1Q01081 240 aaKnown RBP eCLIP5.86□□□□□ -1.47
LRCH3-214ENST00000473177 CHAF1AQ13111 956 aaPredicted RBP5.86□□□□□ -1.47
LRCH3-214ENST00000473177 GRIK5Q16478 980 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms