RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 CRIM1Q9NZV1 1036 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 WHRNQ9P202 907 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 PCDHGC5Q9Y5F6 944 aa4.93□□□□□ -1.62
HMGB1P25-201ENST00000468402 DLL1O00548 723 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 TBX1O43435 398 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 CBFA2T2O43439 604 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 EFCAB14O75071 495 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 DNAJC8O75937 253 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 CST3P01034 146 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 JMJD7P0C870 316 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 DRD2P14416 443 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 ATF3P18847 181 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 ECI1P42126 302 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 ASPAP45381 313 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 RNF4P78317 190 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 GABREP78334 506 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 AUHQ13825 339 aaKnown RBP4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 PCBP1Q15365 356 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 FOXD4L6Q3SYB3 417 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 PPP4R4Q6NUP7 873 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 FOXD4L3Q6VB84 417 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 LINC00114Q6XXX2 140 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 C7orf61Q8IZ16 206 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 SLC7A14Q8TBB6 771 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 KCTD13Q8WZ19 329 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 SLC52A2Q9HAB3 445 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 AASDHPPTQ9NRN7 309 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 ABCC9O60706 1549 aa4.92□□□□□ -1.62
HMGB1P25-201ENST00000468402 KIF3BO15066 747 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 TSPAN6O43657 245 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 PLIN1O60240 522 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 ASLP04424 464 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 KRT18P05783 430 aaKnown RBP4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 SNRPB2P08579 225 aaKnown RBP4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 RAB27AP51159 221 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 SCNN1BP51168 640 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 TMPRSS15P98073 1019 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 OS9Q13438 667 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 BIRC2Q13490 618 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 SLBPQ14493 270 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 ZNF460Q14592 562 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 ARTNQ5T4W7 220 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 NBPF12Q5TAG4 269 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 RNF219Q5W0B1 726 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 FDX2Q6P4F2 183 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 PKN3Q6P5Z2 889 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 ACAD11Q709F0 780 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 FGD2Q7Z6J4 655 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 UBE3DQ7Z6J8 389 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 SMYD4Q8IYR2 804 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 CHPFQ8IZ52 775 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 ISL2Q96A47 359 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 NACC1Q96RE7 527 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 TTC1Q99614 292 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 CCDC8Q9H0W5 538 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 NOL6Q9H6R4 1146 aaKnown RBP4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 LGR6Q9HBX8 967 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 GP6Q9HCN6 339 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 PCDHB12Q9Y5F1 795 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 SYNGAP1Q96PV0 1343 aa4.91□□□□□ -1.62
HMGB1P25-201ENST00000468402 SHTN1A0MZ66 631 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 BRINP1O60477 761 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 DLX3O60479 287 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 DEAF1O75398 565 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 NEFMP07197 916 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 PYGMP11217 842 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 ADH5P11766 374 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 IGFALSP35858 605 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 DGKGP49619 791 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 RAC1P63000 192 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 SOX4Q06945 474 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 TRIM28Q13263 835 aaKnown RBP4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 STAT4Q14765 748 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 LRRC41Q15345 812 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 SF1Q15637 639 aaKnown RBP4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 NFE2Q16621 373 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 NBPF9Q3BBW0 867 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 ANKRD39Q53RE8 183 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 GTF2IRD2BQ6EKJ0 949 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 USP53Q70EK8 1073 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 ARMCX6Q7L4S7 300 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 CDH24Q86UP0 819 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 GTF2IRD2Q86UP8 949 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 ZBTB46Q86UZ6 589 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 TRIM59Q8IWR1 403 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 MFSD2AQ8NA29 543 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 OR2W6PQ8NHA6 318 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 PI4K2BQ8TCG2 481 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 PMM1Q92871 262 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 PTPRN2Q92932 1015 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 WNK4Q96J92 1243 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 KREMEN1Q96MU8 473 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 ZDHHC15Q96MV8 337 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 MIPEPQ99797 713 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 DSCC1Q9BVC3 393 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 RNF208Q9H0X6 261 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 TRIM39Q9HCM9 518 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 ZIM2Q9NZV7 527 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 CGGBP1Q9UFW8 167 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms