RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 PKN1Q16512 942 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 LEXMQ3ZCV2 418 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 PPP1R26Q5T8A7 1209 aaPredicted RBP6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 ATOH1Q92858 354 aaPredicted RBP6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 PHACTR3Q96KR7 559 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 TDRD3Q9H7E2 651 aaKnown RBP6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 MIS18AQ9NYP9 233 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 MSRAQ9UJ68 235 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 MINPP1Q9UNW1 487 aa6.96□□□□□ -1.3
SBDSP1-204ENST00000453858 IGSF10Q6WRI0 2623 aa6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 TCP10L2B9ZVM9 353 aa6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 ST8SIA5O15466 376 aa6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 IL9P15248 144 aa6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 SMPD1P17405 629 aa6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 RFX1P22670 979 aa6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 FKBP1AP62942 108 aaKnown RBP6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 ERVK-9P63128 1117 aa6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 CCL14Q16627 93 aa6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 HSP90AB3PQ58FF7 597 aa6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 HERC4Q5GLZ8 1057 aaPredicted RBP6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 COPS6Q7L5N1 327 aa6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 FASTKD5Q7L8L6 764 aaKnown RBP6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 ISCA1Q9BUE6 129 aa6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 IRF2BPLQ9H1B7 796 aa6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 OTOGLQ3ZCN5 2332 aa6.95□□□□□ -1.3
SBDSP1-204ENST00000453858 FRMPD3Q5JV73 1810 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 TEP1Q99973 2627 aaKnown RBP6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 ARAP2Q8WZ64 1704 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 F8W031 263 aaPredicted RBP6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 J3QL48 77 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 LPXNO60711 386 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 ATG7O95352 703 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 CLTBP09497 229 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 SLC5A1P13866 664 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 MYOGP15173 224 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 RAG1P15918 1043 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 CCT4P50991 539 aaKnown RBP6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 RAB15P59190 212 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 EIF4A1P60842 406 aaKnown RBP6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 CDCA8Q53HL2 280 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 OXLD1Q5BKU9 147 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 NOL9Q5SY16 702 aaKnown RBP6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 GJC2Q5T442 439 aaPredicted RBP6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 MCM10Q7L590 875 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 EDAQ92838 391 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 FSD1Q9BTV5 496 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 CD209Q9NNX6 404 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 DLL3Q9NYJ7 618 aa6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 DDX20Q9UHI6 824 aaKnown RBP6.94□□□□□ -1.3
SBDSP1-204ENST00000453858 TEX15Q9BXT5 2789 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 ZNF462Q96JM2 2506 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 FREM2Q5SZK8 3169 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 FAM196BA6NMK8 535 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 H0Y858 1186 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 IRS4O14654 1257 aaPredicted RBP6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 AXIN1O15169 862 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 TIMP1P01033 207 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 NR3C2P08235 984 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 ZP2Q05996 745 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 FAAP100Q0VG06 881 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 ELOAQ14241 798 aaKnown RBP6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 TAF7Q15545 349 aaPredicted RBP6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 TSGA10IPQ3SY00 556 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 MFSD5Q6N075 450 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 ZNF365Q70YC5 407 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 MIGA2Q7L4E1 593 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 DZIP1LQ8IYY4 767 aaKnown RBP6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 ADSSL1Q8N142 457 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 TRPV1Q8NER1 839 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 TLR9Q9NR96 1032 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 SH2B1Q9NRF2 756 aaPredicted RBP6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 RBM19Q9Y4C8 960 aaKnown RBP6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 AFG3L2Q9Y4W6 797 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 KMT2EQ8IZD2 1858 aa6.93□□□□□ -1.3
SBDSP1-204ENST00000453858 GBF1Q92538 1859 aa6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 ZKSCAN1P17029 563 aaPredicted RBP6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 ADCYAP1R1P41586 468 aa6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 RABGGTBP53611 331 aa6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 VCPP55072 806 aaKnown RBP6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 TRIM28Q13263 835 aaKnown RBP6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 PUM1Q14671 1186 aaKnown RBP eCLIP6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 TREML4Q6UXN2 200 aa6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 CYP2U1Q7Z449 544 aa6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 LURAP1LQ8IV03 231 aa6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 DEPDC4Q8N2C3 294 aa6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 SMCR8Q8TEV9 937 aaPredicted RBP6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 KLF16Q9BXK1 252 aaPredicted RBP6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 UBE2ZQ9H832 354 aaPredicted RBP6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 FLRT1Q9NZU1 646 aa6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 LEMD3Q9Y2U8 911 aa6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 PIEZO2Q9H5I5 2752 aa6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 ZNF521Q96K83 1311 aa6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 ANKRD17O75179 2603 aaKnown RBP6.92□□□□□ -1.3
SBDSP1-204ENST00000453858 TMEM221A6NGB7 291 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 M0R296 226 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 MSCO60682 206 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 LILRA1O75019 489 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 ANXA1P04083 346 aa6.91□□□□□ -1.3
SBDSP1-204ENST00000453858 IL1R1P14778 569 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms