RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 STX8Q9UNK0 236 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 TMX2Q9Y320 296 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 ROBO3Q96MS0 1386 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 ADGRA2Q96PE1 1338 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 FAM205CA6NFA0 338 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 ARHGAP33O14559 1287 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 TNPO2O14787 897 aaKnown RBP6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 FLOT1O75955 427 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 TTLL1O95922 423 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 OATP04181 439 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 PBX2P40425 430 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 GCLCP48506 637 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 PLS1Q14651 629 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 PKN2Q16513 984 aaKnown RBP6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 IMMTQ16891 758 aaKnown RBP6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 FAM83BQ5T0W9 1011 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 AKNAD1Q5T1N1 836 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 IFFO2Q5TF58 517 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 SLFN13Q68D06 897 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 FBXO46Q6PJ61 603 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 POTEEQ6S8J3 1075 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 TBC1D10CQ8IV04 446 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 LRRC47Q8N1G4 583 aaKnown RBP6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 GPRC5AQ8NFJ5 357 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 MARVELD3Q96A59 401 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 C12orf42Q96LP6 360 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 DSCC1Q9BVC3 393 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 NBPF3Q9H094 633 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 SH2D4AQ9H788 454 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 MTMR4Q9NYA4 1195 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 HOXC10Q9NYD6 342 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 BTBD7Q9P203 1132 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 NYAP2Q9P242 653 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 CTNNA3Q9UI47 895 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 ANAPC4Q9UJX5 808 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 HPS5Q9UPZ3 1129 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 PTCH2Q9Y6C5 1203 aa6.82□□□□□ -1.32
HMGB3P24-201ENST00000433260 MYPNQ86TC9 1320 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 COL11A1P12107 1806 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 IGKV6D-41A0A0C4DH26 115 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 B4E1Z4 1266 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 TRIM66O15016 1216 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 SGSM2O43147 1006 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 KDM4AO75164 1064 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 CNMDO75829 334 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 FGRP09769 529 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 CYP2B6P20813 491 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 FECHP22830 423 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 MCCP23508 829 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 HOXD10P28358 340 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 PRKCZQ05513 592 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 PADI6Q6TGC4 694 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 KIAA1211Q6ZU35 1233 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 PACS2Q86VP3 889 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 RAET1EQ8TD07 263 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 SH3TC2Q8TF17 1288 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 MKL1Q969V6 931 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 COA7Q96BR5 231 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 ATG4CQ96DT6 458 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 CWC22Q9HCG8 908 aaKnown RBP6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 FBXO28Q9NVF7 368 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 BIN2Q9UBW5 565 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 SRRDQ9UH36 339 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 GREB1LQ9C091 1923 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 DOCK3Q8IZD9 2030 aa6.81□□□□□ -1.32
HMGB3P24-201ENST00000433260 NEDD4P46934 1319 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 ZNFX1Q9P2E3 1918 aaKnown RBP6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 TMEM232C9JQI7 657 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 WDR46O15213 610 aaKnown RBP6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 ORC4O43929 436 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 NDUFB10O96000 172 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 GNRH1P01148 92 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 CYP21A2P08686 494 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 ELNP15502 786 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 FLT3LGP49771 235 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 SOX10P56693 466 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 SNAP25P60880 206 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 ERVK-9P63128 1117 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 ERVK-24P63145 666 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 IKQ13123 557 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 FAM110CQ1W6H9 321 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 BMP2KLQ5H9B9 411 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 ERICH6BQ5W0A0 696 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 KCTD1Q719H9 257 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 CHST3Q7LGC8 479 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 STAG1Q8WVM7 1258 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 LPAR1Q92633 364 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 ESR2Q92731 530 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 KIFC2Q96AC6 838 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 TMEM47Q9BQJ4 181 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 ESYT1Q9BSJ8 1104 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 PORCNQ9H237 461 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 RNF41Q9H4P4 317 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 GPCPD1Q9NPB8 672 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 ANO2Q9NQ90 1003 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 ZSWIM5Q9P217 1185 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 MORF4L1Q9UBU8 362 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 RABGAP1Q9Y3P9 1069 aa6.8□□□□□ -1.32
HMGB3P24-201ENST00000433260 CTDP1Q9Y5B0 961 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms