RNA–Protein interactions for RNA: ENST00000407089.2

SPTLC1P2-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 2, humanhuman

BASIC

Gene SPTLC1P2, Length 121 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P2-201ENST00000407089 RAI14Q9P0K7 980 aa6.58□□□□□ -1.36
SPTLC1P2-201ENST00000407089 HMG20BQ9P0W2 317 aa6.58□□□□□ -1.36
SPTLC1P2-201ENST00000407089 PRKAG3Q9UGI9 489 aa6.58□□□□□ -1.36
SPTLC1P2-201ENST00000407089 SAP30BPQ9UHR5 308 aaKnown RBP6.58□□□□□ -1.36
SPTLC1P2-201ENST00000407089 FBXO3Q9UK99 471 aa6.58□□□□□ -1.36
SPTLC1P2-201ENST00000407089 CACNA1FO60840 1977 aa6.58□□□□□ -1.36
SPTLC1P2-201ENST00000407089 GRIN2DO15399 1336 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 IL16Q14005 1332 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 CACNA1GO43497 2377 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ZNFX1Q9P2E3 1918 aaKnown RBP6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 H3BQ06 376 aaPredicted RBP6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 BAG3O95817 575 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 PFKMP08237 780 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 GUCY1A2P33402 732 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ID4P47928 161 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 NKX3-2P78367 333 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 EXOSC9Q06265 439 aaKnown RBP6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 KCTD2Q14681 263 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 TMEM132BQ14DG7 1078 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 PKN1Q16512 942 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 CCDC27Q2M243 656 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ABCB5Q2M3G0 1257 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 CERKLQ49MI3 558 aaPredicted RBP6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 HERC4Q5GLZ8 1057 aaPredicted RBP6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 KIAA1755Q5JYT7 1200 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 CXCL17Q6UXB2 119 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 MAMDC4Q6UXC1 1216 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ATF7IPQ6VMQ6 1270 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 DEFB128Q7Z7B8 93 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ADHFE1Q8IWW8 467 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 MSL3Q8N5Y2 521 aaKnown RBP6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 GDPD5Q8WTR4 605 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 EDAQ92838 391 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 PBXIP1Q96AQ6 731 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ATG4CQ96DT6 458 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 SLC9A7Q96T83 725 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 TANGO6Q9C0B7 1094 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 USP44Q9H0E7 712 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 SUGCTQ9HAC7 445 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 AATFQ9NY61 560 aaKnown RBP eCLIP6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 MUTYHQ9UIF7 546 aa6.57□□□□□ -1.36
SPTLC1P2-201ENST00000407089 CACNA1BQ00975 2339 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 FANCIQ9NVI1 1328 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 A0A1W2PRG0 241 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 LCHNA4D1U4 455 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 PROB1E7EW31 1015 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 B4GALT4O60513 344 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 RGS20O76081 388 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 HLA-DOAP06340 250 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ACTN1P12814 892 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 PLCG2P16885 1265 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 IL15P40933 162 aaPredicted RBP6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 BEX3Q00994 111 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ITGA7Q13683 1181 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ACVR2BQ13705 512 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 CCDC144BQ3MJ40 725 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 PI16Q6UXB8 463 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ASCL5Q7RTU5 278 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 RIOX2Q8IUF8 465 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 SPATA5Q8NB90 893 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ATOH1Q92858 354 aaPredicted RBP6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 XAGE2Q96GT9 111 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 NOL10Q9BSC4 688 aaKnown RBP6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 SEZ6LQ9BYH1 1024 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 IRF2BPLQ9H1B7 796 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 CABP5Q9NP86 173 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ZHX1Q9UKY1 873 aaPredicted RBP6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ADAMTS5Q9UNA0 930 aa6.56□□□□□ -1.36
SPTLC1P2-201ENST00000407089 TECTAO75443 2155 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 C5orf42Q9H799 3197 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 TMEM221A6NGB7 291 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 M0R296 226 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 CABYRO75952 493 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 FLOT1O75955 427 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ERVK-21P61565 698 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 MVPQ14764 893 aaKnown RBP6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 SEPT2Q15019 361 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 TRIM67Q6ZTA4 783 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 ADGRA1Q86SQ6 560 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 RNF135Q8IUD6 432 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 FBXL6Q8N531 539 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 LRP2BPQ9P2M1 347 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 MTUS1Q9ULD2 1270 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 TRPC6Q9Y210 931 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 FAM50BQ9Y247 325 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 TRIOO75962 3097 aa6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 KMT2BQ9UMN6 2715 aaPredicted RBP6.55□□□□□ -1.36
SPTLC1P2-201ENST00000407089 RIF1Q5UIP0 2472 aaKnown RBP6.54□□□□□ -1.36
SPTLC1P2-201ENST00000407089 EPG5Q9HCE0 2579 aa6.54□□□□□ -1.36
SPTLC1P2-201ENST00000407089 DNAJC25-GNG10A0A024R161 153 aa6.54□□□□□ -1.36
SPTLC1P2-201ENST00000407089 A0A1B0GUL7 405 aa6.54□□□□□ -1.36
SPTLC1P2-201ENST00000407089 MED19A0JLT2 244 aaPredicted RBP6.54□□□□□ -1.36
SPTLC1P2-201ENST00000407089 SOWAHBA6NEL2 793 aa6.54□□□□□ -1.36
SPTLC1P2-201ENST00000407089 CYP2C9P11712 490 aa6.54□□□□□ -1.36
SPTLC1P2-201ENST00000407089 SHMT1P34896 483 aa6.54□□□□□ -1.36
SPTLC1P2-201ENST00000407089 RFC2P35250 354 aa6.54□□□□□ -1.36
SPTLC1P2-201ENST00000407089 STAT3P40763 770 aa6.54□□□□□ -1.36
SPTLC1P2-201ENST00000407089 PSMC6P62333 389 aa6.54□□□□□ -1.36
SPTLC1P2-201ENST00000407089 DYNLL1P63167 89 aaKnown RBP6.54□□□□□ -1.36
SPTLC1P2-201ENST00000407089 NAA16Q6N069 864 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms