RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PNMA8AQ86V59 439 aaPredicted RBP15.16■□□□□ 0.02
VAPA-202ENST00000400000 KCNK3O14649 394 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 NLRP12P59046 1061 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 CLGNO14967 610 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 MARK3P27448 753 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 RFC1P35251 1148 aaPredicted RBP15.16■□□□□ 0.02
VAPA-202ENST00000400000 KRT25Q7Z3Z0 450 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 EFCC1Q9HA90 598 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 TRAPPC8Q9Y2L5 1435 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 TEX14Q8IWB6 1497 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 MIPOL1Q8TD10 442 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 CHAMP1Q96JM3 812 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 DDX25Q9UHL0 483 aaKnown RBP15.16■□□□□ 0.02
VAPA-202ENST00000400000 CCPG1Q9ULG6 757 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 INPP5FQ9Y2H2 1132 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 TMEM232C9JQI7 657 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 RPS6KA1Q15418 735 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 PPM1KQ8N3J5 372 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 AS3MTQ9HBK9 375 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 UHRF1BP1Q6BDS2 1440 aa15.16■□□□□ 0.02
VAPA-202ENST00000400000 RPS8P62241 208 aaKnown RBP15.15■□□□□ 0.02
VAPA-202ENST00000400000 GBP7Q8N8V2 638 aaPredicted RBP15.15■□□□□ 0.02
VAPA-202ENST00000400000 CUTAO60888 179 aa15.15■□□□□ 0.02
VAPA-202ENST00000400000 ZBTB33Q86T24 672 aa15.15■□□□□ 0.02
VAPA-202ENST00000400000 IFT20Q8IY31 132 aa15.15■□□□□ 0.02
VAPA-202ENST00000400000 RASGRP4Q8TDF6 673 aa15.15■□□□□ 0.02
VAPA-202ENST00000400000 MAD1L1Q9Y6D9 718 aa15.15■□□□□ 0.02
VAPA-202ENST00000400000 SESN3P58005 492 aa15.15■□□□□ 0.02
VAPA-202ENST00000400000 SND1Q7KZF4 910 aaKnown RBP eCLIP15.15■□□□□ 0.024e-15■□□□□ 9.2
VAPA-202ENST00000400000 SNX21Q969T3 373 aa15.15■□□□□ 0.02
VAPA-202ENST00000400000 ARHGAP42A6NI28 874 aa15.15■□□□□ 0.02
VAPA-202ENST00000400000 RNF217Q8TC41 542 aa15.15■□□□□ 0.02
VAPA-202ENST00000400000 MAP3K1Q13233 1512 aa15.15■□□□□ 0.02
VAPA-202ENST00000400000 ADCY8P40145 1251 aa15.14■□□□□ 0.02
VAPA-202ENST00000400000 ERCC6LQ2NKX8 1250 aa15.14■□□□□ 0.02
VAPA-202ENST00000400000 ALKBH8Q96BT7 664 aaKnown RBP15.14■□□□□ 0.02
VAPA-202ENST00000400000 PCIF1Q9H4Z3 704 aa15.14■□□□□ 0.02
VAPA-202ENST00000400000 BAG2O95816 211 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 CCDC13Q8IYE1 715 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 POLIQ9UNA4 740 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 AFAP1L2Q8N4X5 818 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 OLA1Q9NTK5 396 aaKnown RBP15.14■□□□□ 0.01
VAPA-202ENST00000400000 MEIS1O00470 390 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 NR1I2O75469 434 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 POLR2MP0CAP2 368 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 SEPT6Q14141 434 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 RBBP5Q15291 538 aaKnown RBP15.14■□□□□ 0.01
VAPA-202ENST00000400000 DENND2CQ68D51 928 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 IFIH1Q9BYX4 1025 aaKnown RBP15.14■□□□□ 0.01
VAPA-202ENST00000400000 PRKAG2Q9UGJ0 569 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 DKC1O60832 514 aaKnown RBP eCLIP15.14■□□□□ 0.01
VAPA-202ENST00000400000 TNNC2P02585 160 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 ATP1A2P50993 1020 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 POLR2FP61218 127 aaKnown RBP15.14■□□□□ 0.01
VAPA-202ENST00000400000 SNX1Q13596 522 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 ZNF654Q8IZM8 581 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 ABI1Q8IZP0 508 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 TSC1Q92574 1164 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 RAB20Q9NX57 234 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 PCDHA12Q9UN75 941 aa15.14■□□□□ 0.01
VAPA-202ENST00000400000 PPEF1O14829 653 aaPredicted RBP15.13■□□□□ 0.01
VAPA-202ENST00000400000 P4HA1P13674 534 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 RNASELQ05823 741 aaKnown RBP15.13■□□□□ 0.01
VAPA-202ENST00000400000 GBP6Q6ZN66 633 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 HACE1Q8IYU2 909 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 ZSCAN10Q96SZ4 725 aaPredicted RBP15.13■□□□□ 0.01
VAPA-202ENST00000400000 MROH5Q6ZUA9 1318 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 TRIM68Q6AZZ1 485 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 MICAL1Q8TDZ2 1067 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 GJA10Q969M2 543 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 DDX27Q96GQ7 796 aaKnown RBP15.13■□□□□ 0.01
VAPA-202ENST00000400000 ADD1P35611 737 aaKnown RBP15.13■□□□□ 0.01
VAPA-202ENST00000400000 PLA2G4DQ86XP0 818 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 RPS6KC1Q96S38 1066 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 SLC5A4Q9NY91 659 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 A0A087WWV3 80 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 ADORA1P30542 326 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 DYNLT1P63172 113 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 PTH1RQ03431 593 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 HP1BP3Q5SSJ5 553 aaPredicted RBP15.13■□□□□ 0.01
VAPA-202ENST00000400000 KBTBD3Q8NAB2 608 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 HOOK2Q96ED9 719 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 PRDM5Q9NQX1 630 aaPredicted RBP15.13■□□□□ 0.01
VAPA-202ENST00000400000 RAPGEF6Q8TEU7 1601 aa15.13■□□□□ 0.01
VAPA-202ENST00000400000 ME3Q16798 604 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 LRFN2Q9ULH4 789 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 ZNF75DP51815 510 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 ZNF710Q8N1W2 664 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 GNPTABQ3T906 1256 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 ARMCX5Q6P1M9 558 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 HDAC11Q96DB2 347 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 CASQ2O14958 399 aaPredicted RBP15.12■□□□□ 0.01
VAPA-202ENST00000400000 ICA1Q05084 483 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 CHRNDQ07001 517 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 FBXO11Q86XK2 927 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 ZBTB8OSQ8IWT0 167 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 ANKRD13CQ8N6S4 541 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 ECE1P42892 770 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 RAPH1Q70E73 1250 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms