RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PAGE5Q96GU1 130 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 NEK8Q86SG6 692 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 SYCE1Q8N0S2 351 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 PLEKHA4Q9H4M7 779 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 MAGEF1Q9HAY2 307 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 WDR19Q8NEZ3 1342 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 TMEM232C9JQI7 657 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 GJC1P36383 396 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 NCAPH2Q6IBW4 605 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 PEX26Q7Z412 305 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 MB21D2Q8IYB1 491 aaPredicted RBP19.3■□□□□ 0.68
PTPRU-202ENST00000373779 CAPS2Q9BXY5 557 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 FAN1Q9Y2M0 1017 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 VIMP08670 466 aaKnown RBP19.3■□□□□ 0.68
PTPRU-202ENST00000373779 GUCY2FP51841 1108 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 RAD51AP2Q09MP3 1159 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 TOGARAM2Q6ZUX3 1019 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 NT5C3AQ9H0P0 336 aa19.3■□□□□ 0.68
PTPRU-202ENST00000373779 BUB1O43683 1085 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 EEF2P13639 858 aaKnown RBP19.29■□□□□ 0.68
PTPRU-202ENST00000373779 EXOC4Q96A65 974 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 EYA3Q99504 573 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 COL3A1P02461 1466 aaPredicted RBP19.29■□□□□ 0.68
PTPRU-202ENST00000373779 OVOS2A0A0J9YW53 1432 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 OVOS2Q6IE36 1432 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 FRMPD1Q5SYB0 1578 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 ACTN2P35609 894 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 CNBD1Q8NA66 436 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 SLC39A2Q9NP94 309 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 ASAP1Q9ULH1 1129 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 MCAMP43121 646 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 DAAM2Q86T65 1068 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 TBC1D10CQ8IV04 446 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 RPS8P62241 208 aaKnown RBP19.29■□□□□ 0.68
PTPRU-202ENST00000373779 IQCB1Q15051 598 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 STOX1Q6ZVD7 989 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 EPSTI1Q96J88 318 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 DNM3Q9UQ16 869 aa19.29■□□□□ 0.68
PTPRU-202ENST00000373779 E7EVH7 732 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 MORC2Q9Y6X9 1032 aaPredicted RBP19.28■□□□□ 0.68
PTPRU-202ENST00000373779 ATP2A1O14983 1001 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 CUEDC2Q9H467 287 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 STK24Q9Y6E0 443 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 PIK3C2BO00750 1634 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 SPOPO43791 374 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 MFAP3LO75121 409 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 NLRP10Q86W26 655 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 UBL4BQ8N7F7 174 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 DHTKD1Q96HY7 919 aaPredicted RBP19.28■□□□□ 0.68
PTPRU-202ENST00000373779 RBM17Q96I25 401 aaKnown RBP19.28■□□□□ 0.68
PTPRU-202ENST00000373779 ABCC12Q96J65 1359 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 PRPF3O43395 683 aaKnown RBP19.28■□□□□ 0.68
PTPRU-202ENST00000373779 PTPREP23469 700 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 CABS1Q96KC9 395 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 PCDHA4Q9UN74 947 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 KDM3AQ9Y4C1 1321 aa19.28■□□□□ 0.68
PTPRU-202ENST00000373779 KLRF2D3W0D1 207 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 HSPA2P54652 639 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 RETREG2Q8NC44 543 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 EEF2KMTQ96G04 330 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 USP32Q8NFA0 1604 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 SOS2Q07890 1332 aaPredicted RBP19.27■□□□□ 0.68
PTPRU-202ENST00000373779 BCAS4Q8TDM0 211 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 GGA1Q9UJY5 639 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 STK36Q9NRP7 1315 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 LAD1O00515 517 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 ARMCX5Q6P1M9 558 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 PPP1R1BQ9UD71 204 aaPredicted RBP19.27■□□□□ 0.68
PTPRU-202ENST00000373779 VGLL3A8MV65 326 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 RNF40O75150 1001 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 ATP5DP30049 168 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 CYB5R4Q7L1T6 521 aa19.27■□□□□ 0.68
PTPRU-202ENST00000373779 STRBPQ96SI9 672 aaKnown RBP19.27■□□□□ 0.68
PTPRU-202ENST00000373779 NEURL4Q96JN8 1562 aa19.27■□□□□ 0.67
PTPRU-202ENST00000373779 UIMC1Q96RL1 719 aa19.27■□□□□ 0.67
PTPRU-202ENST00000373779 FBF1Q8TES7 1133 aa19.26■□□□□ 0.67
PTPRU-202ENST00000373779 RRP15Q9Y3B9 282 aaKnown RBP19.26■□□□□ 0.67
PTPRU-202ENST00000373779 ADGRB2O60241 1585 aa19.26■□□□□ 0.67
PTPRU-202ENST00000373779 CHMP2AO43633 222 aa19.26■□□□□ 0.67
PTPRU-202ENST00000373779 GOLGA8HP0CJ92 632 aa19.26■□□□□ 0.67
PTPRU-202ENST00000373779 EXOSC10Q01780 885 aaKnown RBP19.26■□□□□ 0.67
PTPRU-202ENST00000373779 C6orf163Q5TEZ5 329 aa19.26■□□□□ 0.67
PTPRU-202ENST00000373779 USPL1Q5W0Q7 1092 aa19.26■□□□□ 0.67
PTPRU-202ENST00000373779 P2RX5Q93086 422 aa19.26■□□□□ 0.67
PTPRU-202ENST00000373779 ATP8A2Q9NTI2 1148 aa19.26■□□□□ 0.67
PTPRU-202ENST00000373779 KCNK3O14649 394 aa19.26■□□□□ 0.67
PTPRU-202ENST00000373779 CEP85LQ5SZL2 805 aa19.26■□□□□ 0.67
PTPRU-202ENST00000373779 ZBTB1Q9Y2K1 713 aa19.26■□□□□ 0.67
PTPRU-202ENST00000373779 PALLDQ8WX93 1383 aa19.26■□□□□ 0.67
PTPRU-202ENST00000373779 NDUFA10O95299 355 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 PPARDQ03181 441 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 CCDC24Q8N4L8 307 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 ZNF579Q8NAF0 562 aaKnown RBP19.25■□□□□ 0.67
PTPRU-202ENST00000373779 ANKRD7Q92527 254 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 NEDD4P46934 1319 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 CCZ1BP86790 482 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 CCZ1P86791 482 aaPredicted RBP19.25■□□□□ 0.67
PTPRU-202ENST00000373779 CROCCP2Q86T23 111 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 HINFPQ9BQA5 517 aa19.25■□□□□ 0.67
PTPRU-202ENST00000373779 SEMA3EO15041 775 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms