RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 KRT19P08727 400 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 KCNJ12Q14500 433 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 PPP2R5AQ15172 486 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 GLE1Q53GS7 698 aaKnown RBP10.15□□□□□ -0.78
VPS13A-203ENST00000360280 GPHNQ9NQX3 736 aaPredicted RBP10.15□□□□□ -0.78
VPS13A-203ENST00000360280 SMYD2Q9NRG4 433 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 POLR2BP30876 1174 aaKnown RBP10.15□□□□□ -0.78
VPS13A-203ENST00000360280 EPHB4P54760 987 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 ANKRD2Q9GZV1 360 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 SF3A3Q12874 501 aaKnown RBP eCLIP10.15□□□□□ -0.78
VPS13A-203ENST00000360280 KRT25Q7Z3Z0 450 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 ZMYM4Q5VZL5 1548 aa10.15□□□□□ -0.79
VPS13A-203ENST00000360280 MSH6P52701 1360 aa10.15□□□□□ -0.79
VPS13A-203ENST00000360280 ANKRD35Q8N283 1001 aa10.15□□□□□ -0.79
VPS13A-203ENST00000360280 TTC25Q96NG3 672 aa10.15□□□□□ -0.79
VPS13A-203ENST00000360280 PIK3AP1Q6ZUJ8 805 aa10.15□□□□□ -0.79
VPS13A-203ENST00000360280 TRAIPQ9BWF2 469 aa10.15□□□□□ -0.79
VPS13A-203ENST00000360280 ABCB4P21439 1286 aa10.15□□□□□ -0.79
VPS13A-203ENST00000360280 HDAC4P56524 1084 aa10.15□□□□□ -0.79
VPS13A-203ENST00000360280 MAP3K10Q02779 954 aa10.15□□□□□ -0.79
VPS13A-203ENST00000360280 TTC38Q5R3I4 469 aa10.15□□□□□ -0.79
VPS13A-203ENST00000360280 PICK1Q9NRD5 415 aa10.15□□□□□ -0.79
VPS13A-203ENST00000360280 MAPK8IP1Q9UQF2 711 aa10.15□□□□□ -0.79
VPS13A-203ENST00000360280 CDK13Q14004 1512 aaKnown RBP10.14□□□□□ -0.79
VPS13A-203ENST00000360280 SERPINB10P48595 397 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 IQCB1Q15051 598 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 MCF2L2Q86YR7 1114 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 POLKQ9UBT6 870 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 SBNO2Q9Y2G9 1366 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 RFX1P22670 979 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 NBPF9Q3BBW0 867 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.14□□□□□ -0.79
VPS13A-203ENST00000360280 GIPC2Q8TF65 315 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 KRT4P19013 534 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 HERC4Q5GLZ8 1057 aaPredicted RBP10.14□□□□□ -0.79
VPS13A-203ENST00000360280 CEP70Q8NHQ1 597 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 A6NJR5 290 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 CCDC184Q52MB2 194 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 A0A087WUV0 522 aaPredicted RBP10.14□□□□□ -0.79
VPS13A-203ENST00000360280 FAM207AQ9NSI2 230 aaPredicted RBP10.14□□□□□ -0.79
VPS13A-203ENST00000360280 TYW5A2RUC4 315 aaKnown RBP10.14□□□□□ -0.79
VPS13A-203ENST00000360280 SYCE1LA8MT33 242 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 C8orf34Q49A92 452 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 TRMT10CQ7L0Y3 403 aaKnown RBP10.14□□□□□ -0.79
VPS13A-203ENST00000360280 OR8K1Q8NGG5 319 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 SNX29Q8TEQ0 813 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 KIF1BO60333 1816 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 TTC1Q99614 292 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 F8W031 263 aaPredicted RBP10.14□□□□□ -0.79
VPS13A-203ENST00000360280 ST7Q9NRC1 585 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 SLC13A4Q9UKG4 626 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 PYGBP11216 843 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 CDV3Q9UKY7 258 aaKnown RBP10.14□□□□□ -0.79
VPS13A-203ENST00000360280 H3BRJ5 948 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 C6orf118Q5T5N4 469 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 TRIM59Q8IWR1 403 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 AZI2Q9H6S1 392 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 C1orf112Q9NSG2 853 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 OTUD6AQ7L8S5 288 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 TTC6Q86TZ1 520 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 TRIM11Q96F44 468 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 PKD2L1Q9P0L9 805 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 SUCLA2Q9P2R7 463 aaPredicted RBP10.14□□□□□ -0.79
VPS13A-203ENST00000360280 TMEM232C9JQI7 657 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 LRWD1Q9UFC0 647 aa10.14□□□□□ -0.79
VPS13A-203ENST00000360280 TMEM247A6NEH6 219 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 YARSP54577 528 aaKnown RBP10.13□□□□□ -0.79
VPS13A-203ENST00000360280 FLOT2Q14254 428 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 U2AF1L4Q8WU68 220 aaKnown RBP10.13□□□□□ -0.79
VPS13A-203ENST00000360280 SOS2Q07890 1332 aaPredicted RBP10.13□□□□□ -0.79
VPS13A-203ENST00000360280 ADCY7P51828 1080 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 ATP8B2P98198 1209 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 PPARDQ03181 441 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 EIF4G3O43432 1585 aaKnown RBP10.13□□□□□ -0.79
VPS13A-203ENST00000360280 CFAP43Q8NDM7 1665 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 ZFYVE9O95405 1425 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 HAUS4Q9H6D7 363 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 EMILIN1Q9Y6C2 1016 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 MAST3O60307 1309 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 NVLO15381 856 aaKnown RBP10.13□□□□□ -0.79
VPS13A-203ENST00000360280 SAAL1Q96ER3 474 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 GCC2Q8IWJ2 1684 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 SAT1P21673 171 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 NSFP46459 744 aaKnown RBP10.13□□□□□ -0.79
VPS13A-203ENST00000360280 ITKQ08881 620 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 IFNA8P32881 189 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 PDE1BQ01064 536 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 GUCY2DQ02846 1103 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 NCAPH2Q6IBW4 605 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 ZC3H18Q86VM9 953 aaKnown RBP10.13□□□□□ -0.79
VPS13A-203ENST00000360280 CAPN11Q9UMQ6 739 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 SUFUQ9UMX1 484 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 PCDHB13Q9Y5F0 798 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 ZNF500O60304 480 aaPredicted RBP10.13□□□□□ -0.79
VPS13A-203ENST00000360280 ENAHQ8N8S7 591 aaPredicted RBP10.13□□□□□ -0.79
VPS13A-203ENST00000360280 RPS6KC1Q96S38 1066 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 ING2Q9H160 280 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 PRG4Q92954 1404 aaPredicted RBP10.13□□□□□ -0.79
VPS13A-203ENST00000360280 RASGRF2O14827 1237 aa10.13□□□□□ -0.79
VPS13A-203ENST00000360280 LPXNO60711 386 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms