RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ERVK-24P63145 666 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 KRT32Q14532 448 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 DIXDC1Q155Q3 683 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 SKOR2Q2VWA4 1001 aaPredicted RBP9.7□□□□□ -0.86
CD44-205ENST00000352818 SH3D19Q5HYK7 790 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 CCDC158Q5M9N0 1113 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 ZMYM1Q5SVZ6 1142 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 MFSD5Q6N075 450 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 ANKRD33Q7Z3H0 272 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 ZNF589Q86UQ0 364 aaPredicted RBP9.7□□□□□ -0.86
CD44-205ENST00000352818 ZGPATQ8N5A5 531 aaKnown RBP9.7□□□□□ -0.86
CD44-205ENST00000352818 SLC44A5Q8NCS7 719 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 NEUROD6Q96NK8 337 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 DSCC1Q9BVC3 393 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 SH2B1Q9NRF2 756 aaPredicted RBP9.7□□□□□ -0.86
CD44-205ENST00000352818 FOXD4L1Q9NU39 408 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 FAM86C1Q9NVL1 165 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 LIMCH1Q9UPQ0 1083 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 CYP46A1Q9Y6A2 500 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 FAM186AA6NE01 2351 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 A0A0G2JMZ2 1700 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 MED19A0JLT2 244 aaPredicted RBP9.69□□□□□ -0.86
CD44-205ENST00000352818 DDTLA6NHG4 134 aaPredicted RBP9.69□□□□□ -0.86
CD44-205ENST00000352818 GOLGA6L22H0YM25 854 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 DCXO43602 365 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 CNMDO75829 334 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 BRD1O95696 1058 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 MYCNP04198 464 aaPredicted RBP9.69□□□□□ -0.86
CD44-205ENST00000352818 CASTP20810 708 aaKnown RBP9.69□□□□□ -0.86
CD44-205ENST00000352818 TIMM10P62072 90 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 LAMA4Q16363 1823 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 ATP2B3Q16720 1220 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 FAM47AQ5JRC9 791 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 METTL24Q5JXM2 366 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 PPP2R2DQ66LE6 453 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 LDHAL6AQ6ZMR3 332 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 WDR87Q6ZQQ6 2873 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 RUFY3Q7L099 469 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 ZNF280CQ8ND82 737 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 COL26A1Q96A83 441 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 VWCEQ96DN2 955 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 XAGE2Q96GT9 111 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 JAKMIP1Q96N16 626 aaKnown RBP9.69□□□□□ -0.86
CD44-205ENST00000352818 DMXL1Q9Y485 3027 aa9.69□□□□□ -0.86
CD44-205ENST00000352818 GOLIM4O00461 696 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 RNF113AO15541 343 aaKnown RBP9.68□□□□□ -0.86
CD44-205ENST00000352818 LPXNO60711 386 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 BAG4O95429 457 aaKnown RBP9.68□□□□□ -0.86
CD44-205ENST00000352818 IL9P15248 144 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 FGFR2P21802 821 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 ARID4AP29374 1257 aaPredicted RBP9.68□□□□□ -0.86
CD44-205ENST00000352818 HOXA7P31268 230 aaPredicted RBP9.68□□□□□ -0.86
CD44-205ENST00000352818 AK2P54819 239 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 PTPN5P54829 565 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 UBE4AQ14139 1066 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 ANKRD1Q15327 319 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 ADCK5Q3MIX3 580 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 TTC39AQ5SRH9 613 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 POTEDQ86YR6 584 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.68□□□□□ -0.86
CD44-205ENST00000352818 TBC1D22AQ8WUA7 517 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 TOX2Q96NM4 488 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 CERS4Q9HA82 394 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 PDRG1Q9NUG6 133 aa9.68□□□□□ -0.86
CD44-205ENST00000352818 TECTAO75443 2155 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 GAKO14976 1311 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 A0A1W2PQ45 241 aaPredicted RBP9.67□□□□□ -0.86
CD44-205ENST00000352818 A0A1W2PQY0 241 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 FAM196BA6NMK8 535 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 SEPT4O43236 478 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 TRAK2O60296 914 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 PDE8BO95263 885 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 UQCRFS1P1P0C7P4 283 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 PDIA4P13667 645 aaKnown RBP9.67□□□□□ -0.86
CD44-205ENST00000352818 PTPREP23469 700 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 ADORA1P30542 326 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 PABPC4Q13310 644 aaKnown RBP eCLIP9.67□□□□□ -0.86
CD44-205ENST00000352818 PPIGQ13427 754 aaKnown RBP eCLIP9.67□□□□□ -0.86
CD44-205ENST00000352818 TTF1Q15361 905 aaPredicted RBP9.67□□□□□ -0.86
CD44-205ENST00000352818 PUM3Q15397 648 aaKnown RBP9.67□□□□□ -0.86
CD44-205ENST00000352818 PRAMEF19Q5SWL8 479 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 SPRED2Q7Z698 418 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 LPIN2Q92539 896 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 DDX4Q9NQI0 724 aaKnown RBP9.67□□□□□ -0.86
CD44-205ENST00000352818 CNNM1Q9NRU3 951 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 SUGT1Q9Y2Z0 365 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 ZDHHC9Q9Y397 364 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.67□□□□□ -0.86
CD44-205ENST00000352818 DOCK1Q14185 1865 aa9.67□□□□□ -0.86
CD44-205ENST00000352818 MAST3O60307 1309 aa9.66□□□□□ -0.86
CD44-205ENST00000352818 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.66□□□□□ -0.86
CD44-205ENST00000352818 SLC15A5A6NIM6 579 aa9.66□□□□□ -0.86
CD44-205ENST00000352818 SLC5A1P13866 664 aa9.66□□□□□ -0.86
CD44-205ENST00000352818 RPS6KB1P23443 525 aa9.66□□□□□ -0.86
CD44-205ENST00000352818 SSTR3P32745 418 aaPredicted RBP9.66□□□□□ -0.86
CD44-205ENST00000352818 IRX3P78415 501 aaPredicted RBP9.66□□□□□ -0.86
CD44-205ENST00000352818 JAG1P78504 1218 aa9.66□□□□□ -0.86
CD44-205ENST00000352818 ATP2B2Q01814 1243 aa9.66□□□□□ -0.86
CD44-205ENST00000352818 GRB14Q14449 540 aa9.66□□□□□ -0.86
CD44-205ENST00000352818 GORABQ5T7V8 394 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms