RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 ZNF579Q8NAF0 562 aaKnown RBP24■■□□□ 1.43
TRIM3-201ENST00000345851 ZKSCAN3Q9BRR0 538 aa24■■□□□ 1.43
TRIM3-201ENST00000345851 CAPN7Q9Y6W3 813 aa24■■□□□ 1.43
TRIM3-201ENST00000345851 DDX60Q8IY21 1712 aaKnown RBP24■■□□□ 1.43
TRIM3-201ENST00000345851 PHKA1P46020 1223 aa24■■□□□ 1.43
TRIM3-201ENST00000345851 GSCP56915 257 aaPredicted RBP24■■□□□ 1.43
TRIM3-201ENST00000345851 UBXN1Q04323 297 aa24■■□□□ 1.43
TRIM3-201ENST00000345851 C3orf67Q6ZVT6 689 aa24■■□□□ 1.43
TRIM3-201ENST00000345851 SYMPKQ92797 1274 aaKnown RBP24■■□□□ 1.43
TRIM3-201ENST00000345851 EIF3HO15372 352 aaKnown RBP eCLIP23.99■■□□□ 1.43
TRIM3-201ENST00000345851 PSEN1P49768 467 aa23.99■■□□□ 1.43
TRIM3-201ENST00000345851 RRAGBQ5VZM2 374 aa23.99■■□□□ 1.43
TRIM3-201ENST00000345851 GRIN2DO15399 1336 aa23.99■■□□□ 1.43
TRIM3-201ENST00000345851 ANKRD36CQ5JPF3 1778 aa23.99■■□□□ 1.43
TRIM3-201ENST00000345851 TMEM87BQ96K49 555 aa23.99■■□□□ 1.43
TRIM3-201ENST00000345851 HAUS4Q9H6D7 363 aa23.99■■□□□ 1.43
TRIM3-201ENST00000345851 TARSL2A2RTX5 802 aaKnown RBP23.98■■□□□ 1.43
TRIM3-201ENST00000345851 PDE8BO95263 885 aa23.98■■□□□ 1.43
TRIM3-201ENST00000345851 HERVK_113P62684 666 aa23.98■■□□□ 1.43
TRIM3-201ENST00000345851 EZH2Q15910 746 aaKnown RBP23.98■■□□□ 1.43
TRIM3-201ENST00000345851 KIAA1328Q86T90 577 aa23.98■■□□□ 1.43
TRIM3-201ENST00000345851 VGLL2Q8N8G2 317 aa23.98■■□□□ 1.43
TRIM3-201ENST00000345851 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.98■■□□□ 1.43
TRIM3-201ENST00000345851 AIDAQ96BJ3 306 aa23.98■■□□□ 1.43
TRIM3-201ENST00000345851 TTC26A0AVF1 554 aa23.98■■□□□ 1.43
TRIM3-201ENST00000345851 H0YHG0 523 aa23.98■■□□□ 1.43
TRIM3-201ENST00000345851 IDH1O75874 414 aaKnown RBP23.98■■□□□ 1.43
TRIM3-201ENST00000345851 TRIM22Q8IYM9 498 aa23.98■■□□□ 1.43
TRIM3-201ENST00000345851 JADE2Q9NQC1 790 aa23.98■■□□□ 1.43
TRIM3-201ENST00000345851 MYH3P11055 1940 aa23.98■■□□□ 1.43
TRIM3-201ENST00000345851 MYO1FO00160 1098 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 SEMA3EO15041 775 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 NTSR2O95665 410 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 CTDSPL2Q05D32 466 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 RRP12Q5JTH9 1297 aaKnown RBP23.97■■□□□ 1.43
TRIM3-201ENST00000345851 ANKRD18AQ8IVF6 992 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 FOXP1Q9H334 677 aaPredicted RBP23.97■■□□□ 1.43
TRIM3-201ENST00000345851 WASF1Q92558 559 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 ZSWIM5Q9P217 1185 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 CEP131Q9UPN4 1083 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 KCNJ18B7U540 433 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 IFNAR1P17181 557 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 CKAP4Q07065 602 aaKnown RBP23.97■■□□□ 1.43
TRIM3-201ENST00000345851 KCNJ12Q14500 433 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 ERFEQ4G0M1 354 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 HDAC7Q8WUI4 952 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 VPS54Q9P1Q0 977 aa23.97■■□□□ 1.43
TRIM3-201ENST00000345851 LIMA1Q9UHB6 759 aaKnown RBP23.97■■□□□ 1.43
TRIM3-201ENST00000345851 MMP14P50281 582 aa23.96■■□□□ 1.43
TRIM3-201ENST00000345851 PDCLQ13371 301 aa23.96■■□□□ 1.43
TRIM3-201ENST00000345851 TTF1Q15361 905 aaPredicted RBP23.96■■□□□ 1.43
TRIM3-201ENST00000345851 POTEDQ86YR6 584 aa23.96■■□□□ 1.43
TRIM3-201ENST00000345851 GSDMAQ96QA5 445 aa23.96■■□□□ 1.43
TRIM3-201ENST00000345851 USP8P40818 1118 aa23.96■■□□□ 1.43
TRIM3-201ENST00000345851 PPARAQ07869 468 aa23.96■■□□□ 1.43
TRIM3-201ENST00000345851 PAPD7Q5XG87 772 aaKnown RBP23.96■■□□□ 1.43
TRIM3-201ENST00000345851 EP400NLQ6ZTU2 488 aa23.96■■□□□ 1.43
TRIM3-201ENST00000345851 SGMS1Q86VZ5 419 aa23.96■■□□□ 1.43
TRIM3-201ENST00000345851 JPH2Q9BR39 696 aaPredicted RBP23.96■■□□□ 1.43
TRIM3-201ENST00000345851 IQSEC3Q9UPP2 1182 aaPredicted RBP23.96■■□□□ 1.43
TRIM3-201ENST00000345851 MYO5AQ9Y4I1 1855 aaKnown RBP23.95■■□□□ 1.43
TRIM3-201ENST00000345851 STK36Q9NRP7 1315 aa23.95■■□□□ 1.43
TRIM3-201ENST00000345851 MACROD2A1Z1Q3 448 aa23.95■■□□□ 1.42
TRIM3-201ENST00000345851 NDUFAB1O14561 156 aa23.95■■□□□ 1.42
TRIM3-201ENST00000345851 GNPATO15228 680 aa23.95■■□□□ 1.42
TRIM3-201ENST00000345851 MATR3P43243 847 aaKnown RBP eCLIP23.95■■□□□ 1.42
TRIM3-201ENST00000345851 LACRTQ9GZZ8 138 aa23.95■■□□□ 1.42
TRIM3-201ENST00000345851 DUSP10Q9Y6W6 482 aa23.95■■□□□ 1.42
TRIM3-201ENST00000345851 TCP11X2Q5H9J9 407 aa23.95■■□□□ 1.42
TRIM3-201ENST00000345851 SH3RF1Q7Z6J0 888 aa23.95■■□□□ 1.42
TRIM3-201ENST00000345851 NUP133Q8WUM0 1156 aa23.95■■□□□ 1.42
TRIM3-201ENST00000345851 FAM184BQ9ULE4 1060 aa23.95■■□□□ 1.42
TRIM3-201ENST00000345851 SPEF2Q9C093 1822 aa23.94■■□□□ 1.42
TRIM3-201ENST00000345851 RCCD1A6NED2 376 aa23.94■■□□□ 1.42
TRIM3-201ENST00000345851 IDEP14735 1019 aa23.94■■□□□ 1.42
TRIM3-201ENST00000345851 RTN1Q16799 776 aa23.94■■□□□ 1.42
TRIM3-201ENST00000345851 TBC1D9BQ66K14 1250 aa23.94■■□□□ 1.42
TRIM3-201ENST00000345851 OR8K1Q8NGG5 319 aa23.94■■□□□ 1.42
TRIM3-201ENST00000345851 ARL8AQ96BM9 186 aa23.94■■□□□ 1.42
TRIM3-201ENST00000345851 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.94■■□□□ 1.42
TRIM3-201ENST00000345851 AATFQ9NY61 560 aaKnown RBP eCLIP23.94■■□□□ 1.42
TRIM3-201ENST00000345851 FBXO3Q9UK99 471 aa23.94■■□□□ 1.42
TRIM3-201ENST00000345851 CCDC172P0C7W6 258 aa23.94■■□□□ 1.42
TRIM3-201ENST00000345851 ATP1A2P50993 1020 aa23.94■■□□□ 1.42
TRIM3-201ENST00000345851 SLC7A5Q01650 507 aa23.94■■□□□ 1.42
TRIM3-201ENST00000345851 DMGDHQ9UI17 866 aaKnown RBP23.94■■□□□ 1.42
TRIM3-201ENST00000345851 AFF2P51816 1311 aa23.94■■□□□ 1.42
TRIM3-201ENST00000345851 TRIM75PA6NK02 468 aa23.93■■□□□ 1.42
TRIM3-201ENST00000345851 TRIM14Q14142 442 aa23.93■■□□□ 1.42
TRIM3-201ENST00000345851 EARS2Q5JPH6 523 aaKnown RBP23.93■■□□□ 1.42
TRIM3-201ENST00000345851 AENQ8WTP8 325 aaKnown RBP23.93■■□□□ 1.42
TRIM3-201ENST00000345851 LUC7L2Q9Y383 392 aaKnown RBP23.93■■□□□ 1.42
TRIM3-201ENST00000345851 TAF1P21675 1872 aa23.93■■□□□ 1.42
TRIM3-201ENST00000345851 hCG_1642624A0A1W2PR95 340 aa23.93■■□□□ 1.42
TRIM3-201ENST00000345851 WNT7AO00755 349 aa23.93■■□□□ 1.42
TRIM3-201ENST00000345851 ADD2P35612 726 aa23.93■■□□□ 1.42
TRIM3-201ENST00000345851 NELFBQ8WX92 580 aa23.93■■□□□ 1.42
TRIM3-201ENST00000345851 CCNL1Q9UK58 526 aaPredicted RBP23.93■■□□□ 1.42
TRIM3-201ENST00000345851 ZEB2O60315 1214 aa23.93■■□□□ 1.42
TRIM3-201ENST00000345851 PAK1Q13153 545 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms