RNA–Protein interactions for RNA: ENST00000007264.6

RPUSD1-201, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RPUSD1, Length 2,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-201ENST00000007264 VPS33BQ9H267 617 aa27.31■■□□□ 1.96
RPUSD1-201ENST00000007264 GOLGB1Q14789 3259 aaKnown RBP27.3■■□□□ 1.96
RPUSD1-201ENST00000007264 VWA3AA6NCI4 1184 aa27.3■■□□□ 1.96
RPUSD1-201ENST00000007264 hCG_1984214I3L0E3 225 aa27.3■■□□□ 1.96
RPUSD1-201ENST00000007264 SLURP2P0DP57 97 aa27.3■■□□□ 1.96
RPUSD1-201ENST00000007264 OGFOD1Q8N543 542 aa27.3■■□□□ 1.96
RPUSD1-201ENST00000007264 ZNF713Q8N859 430 aaPredicted RBP27.3■■□□□ 1.96
RPUSD1-201ENST00000007264 BPIFA3Q9BQP9 254 aa27.3■■□□□ 1.96
RPUSD1-201ENST00000007264 SERTAD1Q9UHV2 236 aa27.3■■□□□ 1.96
RPUSD1-201ENST00000007264 SMCO2A6NFE2 343 aa27.29■■□□□ 1.96
RPUSD1-201ENST00000007264 PSMD14O00487 310 aa27.29■■□□□ 1.96
RPUSD1-201ENST00000007264 ZBTB7AO95365 584 aa27.29■■□□□ 1.96
RPUSD1-201ENST00000007264 ZNF543Q08ER8 600 aa27.29■■□□□ 1.96
RPUSD1-201ENST00000007264 USP49Q70CQ1 688 aa27.29■■□□□ 1.96
RPUSD1-201ENST00000007264 PIM2Q9P1W9 311 aa27.29■■□□□ 1.96
RPUSD1-201ENST00000007264 CCDC96Q2M329 555 aa27.29■■□□□ 1.96
RPUSD1-201ENST00000007264 GPATCH4Q5T3I0 446 aaKnown RBP27.29■■□□□ 1.96
RPUSD1-201ENST00000007264 SYMPKQ92797 1274 aaKnown RBP27.29■■□□□ 1.96
RPUSD1-201ENST00000007264 VIL1P09327 827 aaKnown RBP27.28■■□□□ 1.96
RPUSD1-201ENST00000007264 POLD1P28340 1107 aa27.28■■□□□ 1.96
RPUSD1-201ENST00000007264 TGFB2P61812 414 aa27.28■■□□□ 1.96
RPUSD1-201ENST00000007264 POSTNQ15063 836 aa27.28■■□□□ 1.96
RPUSD1-201ENST00000007264 ISM2Q6H9L7 571 aa27.28■■□□□ 1.96
RPUSD1-201ENST00000007264 NIM1KQ8IY84 436 aa27.28■■□□□ 1.96
RPUSD1-201ENST00000007264 EPSTI1Q96J88 318 aa27.28■■□□□ 1.96
RPUSD1-201ENST00000007264 KANSL2Q9H9L4 492 aa27.28■■□□□ 1.96
RPUSD1-201ENST00000007264 ZNF75DP51815 510 aa27.28■■□□□ 1.96
RPUSD1-201ENST00000007264 KRT25Q7Z3Z0 450 aa27.28■■□□□ 1.96
RPUSD1-201ENST00000007264 SPC24Q8NBT2 197 aa27.28■■□□□ 1.96
RPUSD1-201ENST00000007264 ATRNL1Q5VV63 1379 aa27.27■■□□□ 1.96
RPUSD1-201ENST00000007264 ARL6IP4Q66PJ3 421 aaKnown RBP27.27■■□□□ 1.96
RPUSD1-201ENST00000007264 TATDN1Q6P1N9 297 aa27.27■■□□□ 1.96
RPUSD1-201ENST00000007264 CCDC125Q86Z20 511 aa27.27■■□□□ 1.96
RPUSD1-201ENST00000007264 DRC7Q8IY82 874 aa27.27■■□□□ 1.96
RPUSD1-201ENST00000007264 TPM4P67936 248 aa27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 DLGAP5Q15398 846 aa27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 INF2Q27J81 1249 aa27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 SARM1Q6SZW1 724 aa27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 PLA2G4DQ86XP0 818 aa27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 DHX58Q96C10 678 aa27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 PCDHA5Q9Y5H7 936 aa27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 COL2A1P02458 1487 aaPredicted RBP27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 SPDYE2BA6NHP3 402 aa27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 RAD21O60216 631 aa27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 SPDYE6P0CI01 402 aa27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 MDM2Q00987 491 aaPredicted RBP27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 TMEM179Q6ZVK1 233 aa27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 ZNRF3Q9ULT6 936 aa27.26■■□□□ 1.95
RPUSD1-201ENST00000007264 FOXN1O15353 648 aa27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 ACTN4O43707 911 aaKnown RBP27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 TPM3P06753 285 aa27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 CSRNP1Q96S65 589 aa27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 NYAP2Q9P242 653 aa27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 ATF5Q9Y2D1 282 aaPredicted RBP27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 ESYT2A0FGR8 921 aa27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 SMTNL1A8MU46 457 aa27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 EEF2P13639 858 aaKnown RBP27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 NONOQ15233 471 aaKnown RBP eCLIP27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 ABCB5Q2M3G0 1257 aa27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.25■■□□□ 1.95
RPUSD1-201ENST00000007264 ADGRF4Q8IZF3 695 aa27.24■■□□□ 1.95
RPUSD1-201ENST00000007264 SMARCE1Q969G3 411 aa27.24■■□□□ 1.95
RPUSD1-201ENST00000007264 COL4A5P29400 1685 aa27.24■■□□□ 1.95
RPUSD1-201ENST00000007264 ICA1Q05084 483 aa27.23■■□□□ 1.95
RPUSD1-201ENST00000007264 DALRD3Q5D0E6 543 aaKnown RBP27.23■■□□□ 1.95
RPUSD1-201ENST00000007264 KCTD1Q719H9 257 aa27.23■■□□□ 1.95
RPUSD1-201ENST00000007264 REXO1Q8N1G1 1221 aaKnown RBP27.23■■□□□ 1.95
RPUSD1-201ENST00000007264 MKL1Q969V6 931 aa27.23■■□□□ 1.95
RPUSD1-201ENST00000007264 GMLQ99445 158 aa27.23■■□□□ 1.95
RPUSD1-201ENST00000007264 PYM1Q9BRP8 204 aaKnown RBP27.23■■□□□ 1.95
RPUSD1-201ENST00000007264 ZBTB12Q9Y330 459 aaPredicted RBP27.23■■□□□ 1.95
RPUSD1-201ENST00000007264 PNMA6FA0A0J9YX94 578 aa27.23■■□□□ 1.95
RPUSD1-201ENST00000007264 TCP10L2B9ZVM9 353 aa27.23■■□□□ 1.95
RPUSD1-201ENST00000007264 SEPT2Q15019 361 aa27.23■■□□□ 1.95
RPUSD1-201ENST00000007264 JMJD4Q9H9V9 463 aa27.23■■□□□ 1.95
RPUSD1-201ENST00000007264 CLRN2A0PK11 232 aa27.22■■□□□ 1.95
RPUSD1-201ENST00000007264 GDF11O95390 407 aa27.22■■□□□ 1.95
RPUSD1-201ENST00000007264 SLFN14P0C7P3 912 aa27.22■■□□□ 1.95
RPUSD1-201ENST00000007264 LONP1P36776 959 aaKnown RBP27.22■■□□□ 1.95
RPUSD1-201ENST00000007264 TXLNAP40222 546 aa27.22■■□□□ 1.95
RPUSD1-201ENST00000007264 MTFR1LQ9H019 292 aa27.22■■□□□ 1.95
RPUSD1-201ENST00000007264 ADCY7P51828 1080 aa27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 RBM26Q5T8P6 1007 aaKnown RBP27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 TTBK2Q6IQ55 1244 aa27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 C4orf32Q8N8J7 132 aa27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 DCAF4Q8WV16 495 aa27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 COA7Q96BR5 231 aa27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 A0A087X0B3 334 aa27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 LAD1O00515 517 aa27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 SMC2O95347 1197 aa27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 PRR29P0C7W0 189 aa27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 SLC1A4P43007 532 aa27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 SHROOM1Q2M3G4 852 aaPredicted RBP27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 DTHD1Q6ZMT9 781 aa27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 GRAMD1CQ8IYS0 662 aa27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 AGBL3Q8NEM8 1001 aa27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 ZNF70Q9UC06 446 aaPredicted RBP27.21■■□□□ 1.95
RPUSD1-201ENST00000007264 PPP1R1BQ9UD71 204 aaPredicted RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms