RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Rgs22G3UYX5 1258 aa14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Top1Q04750 767 aaKnown RBP14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Zdhhc14Q8BQQ1 489 aa14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Spice1Q8C804 860 aa14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Mmtag2Q99LX5 260 aaKnown RBP14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Tmem39aQ9CYC3 486 aa14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Mrvi1Q9WUX5 899 aaKnown RBP14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Duox1A2AQ92 1551 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Lrriq3Q14DL3 633 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Mum1l1Q4VA55 681 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Cdcp1Q5U462 833 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Gpbp1Q6NXH3 473 aaKnown RBP14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Rbm19Q8R3C6 952 aaKnown RBP14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Gdap1l1Q8VE33 370 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Dbndd2Q9CRD4 158 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Frmpd4A2AFR3 1320 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Scgb2b11A0A087WR49 112 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Tcp11Q01755 566 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Gtpbp6Q3U6U5 514 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ccdc114Q3UX62 658 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Tekt3Q6X6Z7 490 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ttc26Q8BS45 554 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 NsmfQ99NF2 532 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 CutaQ9CQ89 177 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Alpk1Q9CXB8 1231 aa14.49□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ppef2O35385 757 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Pip4k2aO70172 405 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 PpardP35396 440 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Evi5P97366 809 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Scg2Q03517 617 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Fam83bQ0VBM2 1012 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Fhod1Q6P9Q4 1197 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Gpt2Q8BGT5 522 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Tmem134Q8R0J4 195 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Sh2b1Q91ZM2 756 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 RarsQ9D0I9 660 aaKnown RBP14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 ToporslQ9D2F8 683 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Syce1Q9D495 329 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Lonrf3Q9D4H7 753 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ube3aO08759 870 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Stag2O35638 1231 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Nr1i2O54915 431 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Lrrc4bP0C192 709 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Aco1P28271 889 aaKnown RBP14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Esyt2Q3TZZ7 845 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ddb1Q3U1J4 1140 aaKnown RBP14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Cyp4f39Q8BGU0 532 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Tmem132aQ922P8 1018 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ipo7Q9EPL8 1038 aaKnown RBP14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Tpcn1Q9EQJ0 817 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Cd2apQ9JLQ0 637 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Dpf1Q9QX66 387 aa14.48□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ddx23D3Z0M9 819 aaKnown RBP14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Parp1P11103 1013 aaKnown RBP14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Usp53P15975 1069 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Celf1P28659 486 aaKnown RBP14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ptpn12P35831 775 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Tmem35bQ3U0Y2 150 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Gm5592Q3V0A6 857 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Tmem232Q5K6N0 675 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Myo19Q5SV80 963 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Sema4bQ62179 823 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Mindy1Q76LS9 468 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Prdm4Q80V63 803 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Cracr2bQ80ZJ8 394 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 LRWD1Q8BUI3 648 aaKnown RBP14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Dclk3Q8BWQ5 790 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Fbxo18Q8K2I9 1042 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Vmn1r218Q8R261 298 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ushbp1Q8R370 680 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Exoc1Q8R3S6 894 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Syf2Q9D198 242 aaKnown RBP14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Arl6ip4Q9JM93 229 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Pex3Q9QXY9 372 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Apol7aB2RT54 418 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Vmn2r71L7N2D8 855 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 GnaqP21279 359 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Lrrc15Q80X72 579 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Sar1bQ9CQC9 198 aa14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 Cwc15Q9JHS9 229 aaKnown RBP14.47□□□□□ -0.09
Nup88-203ENSMUST00000108531 AgtP11859 477 aa14.46□□□□□ -0.09
Nup88-203ENSMUST00000108531 Tbc1d2bQ3U0J8 965 aa14.46□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ccdc42Q5SV66 316 aa14.46□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ddx3yQ62095 658 aaKnown RBP14.46□□□□□ -0.09
Nup88-203ENSMUST00000108531 Papd7Q6PB75 542 aa14.46□□□□□ -0.09
Nup88-203ENSMUST00000108531 MymkQ9D1N4 221 aa14.46□□□□□ -0.09
Nup88-203ENSMUST00000108531 Nr2e3Q9QXZ7 395 aa14.46□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ercc4Q9QZD4 917 aa14.46□□□□□ -0.09
Nup88-203ENSMUST00000108531 Kat6bQ8BRB7 1872 aa14.46□□□□□ -0.1
Nup88-203ENSMUST00000108531 Snx12O70493 165 aa14.46□□□□□ -0.1
Nup88-203ENSMUST00000108531 SarsP26638 512 aaKnown RBP14.46□□□□□ -0.1
Nup88-203ENSMUST00000108531 Il15P48346 162 aa14.46□□□□□ -0.1
Nup88-203ENSMUST00000108531 Cct6aP80317 531 aaKnown RBP14.46□□□□□ -0.1
Nup88-203ENSMUST00000108531 Mkrn3Q60764 544 aa14.46□□□□□ -0.1
Nup88-203ENSMUST00000108531 Irak1Q62406 710 aa14.46□□□□□ -0.1
Nup88-203ENSMUST00000108531 Kdm1aQ6ZQ88 853 aa14.46□□□□□ -0.1
Nup88-203ENSMUST00000108531 Efhd1Q9D4J1 240 aa14.46□□□□□ -0.1
Nup88-203ENSMUST00000108531 Mad2l2Q9D752 211 aa14.46□□□□□ -0.1
Nup88-203ENSMUST00000108531 Bicdl1A0JNT9 577 aa14.45□□□□□ -0.1
Nup88-203ENSMUST00000108531 Ano3A2AHL1 981 aa14.45□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms