RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W PET130P47065 347 aa2.3□□□□□ -2.04
RRP6YOR001W MPP10P47083 593 aaKnown RBP2.3□□□□□ -2.04
RRP6YOR001W MSE1P48525 536 aa2.3□□□□□ -2.04
RRP6YOR001W ATP22P50273 684 aaPredicted RBP2.3□□□□□ -2.04
RRP6YOR001W HOS2P53096 452 aaPredicted RBP2.3□□□□□ -2.04
RRP6YOR001W ATG4P53867 494 aa2.3□□□□□ -2.04
RRP6YOR001W ADE16P54113 591 aaKnown RBP2.3□□□□□ -2.04
RRP6YOR001W YDR179W-AQ03983 463 aa2.3□□□□□ -2.04
RRP6YOR001W RAD33Q04231 177 aa2.3□□□□□ -2.04
RRP6YOR001W ARG7Q04728 441 aa2.3□□□□□ -2.04
RRP6YOR001W SOV1Q04748 898 aa2.3□□□□□ -2.04
RRP6YOR001W ROY1Q04847 553 aa2.3□□□□□ -2.04
RRP6YOR001W HRD3Q05787 833 aa2.3□□□□□ -2.04
RRP6YOR001W LUC7Q07508 261 aaPredicted RBP2.3□□□□□ -2.04
RRP6YOR001W FMP45Q07651 309 aa2.3□□□□□ -2.04
RRP6YOR001W TCO89Q08921 799 aa2.3□□□□□ -2.04
RRP6YOR001W YPL216WQ08964 1102 aa2.3□□□□□ -2.04
RRP6YOR001W KEL3Q08979 651 aaPredicted RBP2.3□□□□□ -2.04
RRP6YOR001W RIM20Q12033 661 aa2.3□□□□□ -2.04
RRP6YOR001W ATG29Q12092 213 aa2.3□□□□□ -2.04
RRP6YOR001W RLM1Q12224 676 aa2.3□□□□□ -2.04
RRP6YOR001W VMA2P16140 517 aaKnown RBP2.29□□□□□ -2.04
RRP6YOR001W ERV1P27882 189 aa2.29□□□□□ -2.04
RRP6YOR001W YJU2P28320 278 aaPredicted RBP2.29□□□□□ -2.04
RRP6YOR001W DEF1P35732 738 aaKnown RBP2.29□□□□□ -2.04
RRP6YOR001W SEC28P40509 296 aaKnown RBP2.29□□□□□ -2.04
RRP6YOR001W RPS7BP48164 190 aaKnown RBP2.29□□□□□ -2.04
RRP6YOR001W VPS73P53142 486 aaKnown RBP2.29□□□□□ -2.04
RRP6YOR001W BOP3P53958 396 aa2.29□□□□□ -2.04
RRP6YOR001W MAK10Q02197 733 aa2.29□□□□□ -2.04
RRP6YOR001W OAZ1Q02803 292 aa2.29□□□□□ -2.04
RRP6YOR001W PEX25Q02969 394 aa2.29□□□□□ -2.04
RRP6YOR001W MSC1Q03104 513 aa2.29□□□□□ -2.04
RRP6YOR001W TRS23Q03784 219 aa2.29□□□□□ -2.04
RRP6YOR001W CYB2P00175 591 aa2.29□□□□□ -2.04
RRP6YOR001W GAL80P04387 435 aa2.29□□□□□ -2.04
RRP6YOR001W PET111P08468 800 aa2.29□□□□□ -2.04
RRP6YOR001W MRP13P12686 339 aa2.29□□□□□ -2.04
RRP6YOR001W EST1P17214 699 aaPredicted RBP2.29□□□□□ -2.04
RRP6YOR001W RNR3P21672 869 aaKnown RBP2.29□□□□□ -2.04
RRP6YOR001W MNE1P24720 663 aa2.29□□□□□ -2.04
RRP6YOR001W YCR051WP25631 222 aa2.29□□□□□ -2.04
RRP6YOR001W CDC15P27636 974 aa2.29□□□□□ -2.04
RRP6YOR001W BRF1P29056 596 aa2.29□□□□□ -2.04
RRP6YOR001W HXT3P32466 567 aaKnown RBP2.29□□□□□ -2.04
RRP6YOR001W RPN2P32565 945 aaKnown RBP2.29□□□□□ -2.04
RRP6YOR001W PMT1P33775 817 aa2.29□□□□□ -2.04
RRP6YOR001W SNU114P36048 1008 aaKnown RBP2.29□□□□□ -2.04
RRP6YOR001W APL3P38065 1025 aa2.29□□□□□ -2.04
RRP6YOR001W AGP2P38090 596 aa2.29□□□□□ -2.04
RRP6YOR001W ARP1P38696 384 aa2.29□□□□□ -2.04
RRP6YOR001W RRF1P38771 230 aa2.29□□□□□ -2.04
RRP6YOR001W ECM10P39987 644 aa2.29□□□□□ -2.04
RRP6YOR001W MAM1P40065 302 aa2.29□□□□□ -2.04
RRP6YOR001W PMT6P42934 759 aa2.29□□□□□ -2.04
RRP6YOR001W MDE1P47095 244 aa2.29□□□□□ -2.04
RRP6YOR001W IMD4P50094 524 aaKnown RBP2.29□□□□□ -2.04
RRP6YOR001W EFM6P53970 246 aa2.29□□□□□ -2.04
RRP6YOR001W RNT1Q02555 471 aa2.29□□□□□ -2.04
RRP6YOR001W RSM28Q03430 361 aa2.29□□□□□ -2.04
RRP6YOR001W PRP42Q03776 544 aaKnown RBP2.29□□□□□ -2.04
RRP6YOR001W YML053CQ04978 212 aa2.29□□□□□ -2.04
RRP6YOR001W VPS38Q05919 439 aa2.29□□□□□ -2.04
RRP6YOR001W MMR1Q06324 491 aa2.29□□□□□ -2.04
RRP6YOR001W RAD34Q06665 692 aa2.29□□□□□ -2.04
RRP6YOR001W SMF3Q12078 473 aaPredicted RBP2.29□□□□□ -2.04
RRP6YOR001W SGS1P35187 1447 aa2.28□□□□□ -2.04
RRP6YOR001W ABF1P14164 731 aa2.28□□□□□ -2.04
RRP6YOR001W MDH1P17505 334 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
RRP6YOR001W CLC1P17891 233 aa2.28□□□□□ -2.04
RRP6YOR001W CPR2P23285 205 aa2.28□□□□□ -2.04
RRP6YOR001W PUP3P25451 205 aaKnown RBP2.28□□□□□ -2.04
RRP6YOR001W LAC1P28496 418 aa2.28□□□□□ -2.04
RRP6YOR001W HRR25P29295 494 aaKnown RBP2.28□□□□□ -2.04
RRP6YOR001W GSH1P32477 678 aa2.28□□□□□ -2.04
RRP6YOR001W LOT5P34234 306 aa2.28□□□□□ -2.04
RRP6YOR001W CMC1P36064 111 aa2.28□□□□□ -2.04
RRP6YOR001W HEL1P36113 551 aa2.28□□□□□ -2.04
RRP6YOR001W UIP5P36137 443 aa2.28□□□□□ -2.04
RRP6YOR001W VBA2P38358 474 aaKnown RBP2.28□□□□□ -2.04
RRP6YOR001W OTU2P38747 307 aaKnown RBP2.28□□□□□ -2.04
RRP6YOR001W SEC31P38968 1273 aaKnown RBP2.28□□□□□ -2.04
RRP6YOR001W SAP1P39955 897 aaKnown RBP2.28□□□□□ -2.04
RRP6YOR001W EFM4P40516 257 aa2.28□□□□□ -2.04
RRP6YOR001W NAS2P40555 220 aa2.28□□□□□ -2.04
RRP6YOR001W ZIM17P42844 174 aa2.28□□□□□ -2.04
RRP6YOR001W YFR020WP43600 232 aa2.28□□□□□ -2.04
RRP6YOR001W GPI8P49018 411 aa2.28□□□□□ -2.04
RRP6YOR001W CTR1P49573 406 aa2.28□□□□□ -2.04
RRP6YOR001W FMS1P50264 508 aa2.28□□□□□ -2.04
RRP6YOR001W OGG1P53397 376 aaPredicted RBP2.28□□□□□ -2.04
RRP6YOR001W YPL107WQ02873 248 aa2.28□□□□□ -2.04
RRP6YOR001W PRP3Q03338 469 aaPredicted RBP2.28□□□□□ -2.04
RRP6YOR001W FIN1Q03898 291 aa2.28□□□□□ -2.04
RRP6YOR001W AVL9Q12500 764 aa2.28□□□□□ -2.04
RRP6YOR001W CTS1P29029 562 aa2.27□□□□□ -2.05
RRP6YOR001W SSE2P32590 693 aaKnown RBP2.27□□□□□ -2.05
RRP6YOR001W YMC2P38087 329 aa2.27□□□□□ -2.05
RRP6YOR001W DIA4P38705 446 aaPredicted RBP2.27□□□□□ -2.05
RRP6YOR001W UIP3P39547 235 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 71.6 ms