RNA–Protein interactions for RNA: YNL054W

VAC7, Transcript of Integral vacuolar membrane protein, yeast

Gene VAC7, Length 3,498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC7	YNL054W	RPL22B	P56628	122 aa	Known RBP	4.24	□□□□□ -1.73
VAC7	YNL054W	DOT1	Q04089	582 aa	Known RBP	4.24	□□□□□ -1.73
VAC7	YNL054W	BCH1	Q05029	724 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	BSC2	Q05611	235 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	RCN2	Q12044	265 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	NSI1	Q12457	570 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	CMC2	Q3E7A4	109 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	CBP6	P07253	162 aa	Predicted RBP	4.24	□□□□□ -1.73
VAC7	YNL054W	CMK2	P22517	447 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	CAP1	P28495	268 aa	Known RBP	4.24	□□□□□ -1.73
VAC7	YNL054W	PMT2	P31382	759 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	KAP122	P32767	1081 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	RGT1	P32862	1170 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
VAC7	YNL054W	YKL100C	P34248	587 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	RSM22	P36056	628 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	DUN1	P39009	513 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	FLC2	P39719	783 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	SAW1	P39735	261 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	YGR210C	P42942	411 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	BPL1	P48445	690 aa	Predicted RBP	4.24	□□□□□ -1.73
VAC7	YNL054W	TPN1	P53099	579 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	SLD3	P53135	668 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	TWF1	P53250	332 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	YNL033W	P53964	284 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	YNL019C	P53975	284 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	SMF3	Q12078	473 aa	Predicted RBP	4.24	□□□□□ -1.73
VAC7	YNL054W	YRF1-1	P0CX20	1796 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	YRF1-5	P0CX21	1796 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	YRF1-8	P0CX22	1796 aa		4.24	□□□□□ -1.73
VAC7	YNL054W	STE2	D6VTK4	431 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	TRP3	P00937	484 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	URA3	P03962	267 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	MSS18	P08593	268 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	TUB3	P09734	445 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	RAM1	P22007	431 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	PUP1	P25043	261 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	SEC1	P30619	724 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	SEC61	P32915	480 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	MRPL36	P36531	177 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	STV1	P37296	890 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	PCA1	P38360	1216 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	RIM4	P38741	713 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	YHR202W	P38887	602 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	PRY3	P47033	881 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	RTA1	P53047	317 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	RRT6	P53117	311 aa	Predicted RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	SNF12	P53628	566 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	VAC7	P53950	1165 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	SCS7	Q03529	384 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	ENT5	Q03769	411 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	KAP95	Q06142	861 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	ENT4	Q07872	247 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	KEL3	Q08979	651 aa	Predicted RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	MED11	Q99278	115 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	IPP1	P00817	287 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	MRP2	P10663	115 aa	Predicted RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	SGV1	P23293	657 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	PPZ1	P26570	692 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	RPT1	P33299	467 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	TEF4	P36008	412 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	MIA40	P36046	403 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	SUL1	P38359	859 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	NMD3	P38861	518 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	EDC3	P39998	551 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	POL31	P46957	487 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	GCD14	P46959	383 aa	Predicted RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	MAK10	Q02197	733 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	GRX5	Q02784	150 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	HPT1	Q04178	221 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	SEG1	Q04279	960 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	SUE1	Q06524	206 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	TRM10	Q12400	293 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	RGS2	Q99188	309 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	RAD52	P06778	471 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	GAL3	P13045	520 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	ENA1	P13587	1091 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	ABF1	P14164	731 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	TRX1	P22217	103 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	BUD31	P25337	157 aa	Predicted RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	PRP21	P32524	280 aa	Predicted RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	GDH2	P33327	1092 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	ATG19	P35193	415 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	GOS1	P38736	223 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	CYC2	P38909	366 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	VPS45	P38932	577 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	CEM1	P39525	442 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	TMN3	P40071	706 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	QDR1	P40475	563 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	COS4	P43542	379 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	CNN1	P43618	361 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	UPF3	P48412	387 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	ENA2	Q01896	1091 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	ELP3	Q02908	557 aa	Known RBP	4.23	□□□□□ -1.73
VAC7	YNL054W	HER2	Q03557	464 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	YDR222W	Q04925	415 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	YEH1	Q07804	573 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	PCL8	Q08966	492 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	THI21	Q08975	551 aa		4.23	□□□□□ -1.73
VAC7	YNL054W	ICL2	Q12031	575 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms