RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	PAN2	P53010	1115 aa	Predicted RBP	15.46	■□□□□ 0.07
CCC1	YLR220W	SMA1	Q02651	245 aa		15.46	■□□□□ 0.07
CCC1	YLR220W	BLS1	Q06071	122 aa		15.46	■□□□□ 0.07
CCC1	YLR220W	SMF3	Q12078	473 aa	Predicted RBP	15.46	■□□□□ 0.07
CCC1	YLR220W	GIP1	P38229	639 aa		15.45	■□□□□ 0.06
CCC1	YLR220W	PPX1	P38698	397 aa		15.45	■□□□□ 0.06
CCC1	YLR220W	YJL206C	P39529	758 aa		15.45	■□□□□ 0.06
CCC1	YLR220W	MRH1	Q12117	320 aa	Predicted RBP	15.45	■□□□□ 0.06
CCC1	YLR220W	PHO84	P25297	587 aa	Known RBP	15.44	■□□□□ 0.06
CCC1	YLR220W	MCM5	P29496	775 aa	Known RBP	15.44	■□□□□ 0.06
CCC1	YLR220W	PHA2	P32452	334 aa		15.44	■□□□□ 0.06
CCC1	YLR220W	THI80	P35202	319 aa		15.44	■□□□□ 0.06
CCC1	YLR220W	YKL151C	P36059	337 aa		15.44	■□□□□ 0.06
CCC1	YLR220W	RIM2	P38127	377 aa		15.44	■□□□□ 0.06
CCC1	YLR220W	HXT5	P38695	592 aa		15.44	■□□□□ 0.06
CCC1	YLR220W	TRS85	P46944	698 aa		15.44	■□□□□ 0.06
CCC1	YLR220W	NIS1	P53939	407 aa		15.44	■□□□□ 0.06
CCC1	YLR220W	RNY1	Q02933	434 aa	Known RBP	15.44	■□□□□ 0.06
CCC1	YLR220W	Q0182	Q9ZZW1	134 aa		15.44	■□□□□ 0.06
CCC1	YLR220W	SPS1	P08458	490 aa		15.43	■□□□□ 0.06
CCC1	YLR220W	EPT1	P22140	391 aa		15.43	■□□□□ 0.06
CCC1	YLR220W	VAN1	P23642	535 aa		15.43	■□□□□ 0.06
CCC1	YLR220W	PRP18	P33411	251 aa	Predicted RBP	15.43	■□□□□ 0.06
CCC1	YLR220W	IML3	P38265	245 aa		15.43	■□□□□ 0.06
CCC1	YLR220W	MUP3	P38734	546 aa		15.43	■□□□□ 0.06
CCC1	YLR220W	BOL2	P53082	120 aa		15.43	■□□□□ 0.06
CCC1	YLR220W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	15.43	■□□□□ 0.06	not detected
CCC1	YLR220W	YOR012W	Q12351	137 aa		15.43	■□□□□ 0.06
CCC1	YLR220W	GTT2	Q12390	233 aa		15.43	■□□□□ 0.06
CCC1	YLR220W	SPE4	Q12455	300 aa		15.43	■□□□□ 0.06
CCC1	YLR220W	TFC3	P34111	1160 aa		15.42	■□□□□ 0.06
CCC1	YLR220W	SLD2	P34252	453 aa		15.42	■□□□□ 0.06
CCC1	YLR220W	PCL5	P38794	229 aa		15.42	■□□□□ 0.06
CCC1	YLR220W	IRR1	P40541	1150 aa		15.42	■□□□□ 0.06
CCC1	YLR220W	TGL2	P54857	326 aa		15.42	■□□□□ 0.06
CCC1	YLR220W	RFA2	P26754	273 aa	Known RBP	15.41	■□□□□ 0.06
CCC1	YLR220W	PHO89	P38361	574 aa		15.41	■□□□□ 0.06
CCC1	YLR220W	TDA10	P42938	290 aa		15.41	■□□□□ 0.06
CCC1	YLR220W	GCD14	P46959	383 aa	Predicted RBP	15.41	■□□□□ 0.06
CCC1	YLR220W	IST1	P53843	298 aa	Predicted RBP	15.41	■□□□□ 0.06
CCC1	YLR220W	ARP4	P80428	489 aa		15.41	■□□□□ 0.06
CCC1	YLR220W	CCE1	Q03702	353 aa		15.41	■□□□□ 0.06
CCC1	YLR220W	UTP13	Q05946	817 aa	Known RBP	15.41	■□□□□ 0.06
CCC1	YLR220W	ATG10	Q07879	167 aa		15.41	■□□□□ 0.06
CCC1	YLR220W	OPI10	Q08202	246 aa		15.41	■□□□□ 0.06
CCC1	YLR220W	ICT1	Q12385	394 aa		15.41	■□□□□ 0.06
CCC1	YLR220W	YKR104W	P0CE69	306 aa		15.4	■□□□□ 0.06
CCC1	YLR220W	RML2	P32611	393 aa		15.4	■□□□□ 0.06
CCC1	YLR220W	TCD2	P36101	447 aa	Known RBP	15.4	■□□□□ 0.06
CCC1	YLR220W	CSN9	Q03981	162 aa		15.4	■□□□□ 0.06
CCC1	YLR220W	HPT1	Q04178	221 aa	Known RBP	15.4	■□□□□ 0.06
CCC1	YLR220W	SPO20	Q04359	397 aa		15.4	■□□□□ 0.06
CCC1	YLR220W	JIP5	Q06214	492 aa	Predicted RBP	15.4	■□□□□ 0.06
CCC1	YLR220W	VTA1	Q06263	330 aa		15.4	■□□□□ 0.06
CCC1	YLR220W	CHS5	Q12114	671 aa	Known RBP	15.4	■□□□□ 0.06
CCC1	YLR220W	MSB2	P32334	1306 aa		15.4	■□□□□ 0.06
CCC1	YLR220W	INH1	P01097	85 aa		15.39	■□□□□ 0.05
CCC1	YLR220W	SIS1	P25294	352 aa	Known RBP	15.39	■□□□□ 0.05
CCC1	YLR220W	AAD3	P25612	363 aa		15.39	■□□□□ 0.05
CCC1	YLR220W	LOS1	P33418	1100 aa	Predicted RBP	15.39	■□□□□ 0.05
CCC1	YLR220W	VRP1	P37370	817 aa		15.39	■□□□□ 0.05
CCC1	YLR220W	DAN4	P47179	1161 aa		15.39	■□□□□ 0.05
CCC1	YLR220W	YGL108C	P53139	140 aa		15.39	■□□□□ 0.05
CCC1	YLR220W	CAF120	P53836	1060 aa		15.39	■□□□□ 0.05
CCC1	YLR220W	OSH6	Q02201	448 aa		15.39	■□□□□ 0.05
CCC1	YLR220W	YMR155W	Q03795	547 aa		15.39	■□□□□ 0.05
CCC1	YLR220W	TOR2	P32600	2474 aa	Known RBP	15.38	■□□□□ 0.05
CCC1	YLR220W	SEM1	O94742	89 aa		15.38	■□□□□ 0.05
CCC1	YLR220W	CPA1	P07258	411 aa	Known RBP	15.38	■□□□□ 0.05
CCC1	YLR220W	SEC53	P07283	254 aa	Known RBP	15.38	■□□□□ 0.05
CCC1	YLR220W	TIP20	P33891	701 aa		15.38	■□□□□ 0.05
CCC1	YLR220W	GMH1	P36125	273 aa		15.38	■□□□□ 0.05
CCC1	YLR220W	TAE1	P38340	232 aa		15.38	■□□□□ 0.05
CCC1	YLR220W	HSE1	P38753	452 aa		15.38	■□□□□ 0.05
CCC1	YLR220W	CYC2	P38909	366 aa		15.38	■□□□□ 0.05
CCC1	YLR220W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	15.38	■□□□□ 0.05	RIP-Chip
CCC1	YLR220W	CCT6	P39079	546 aa		15.38	■□□□□ 0.05
CCC1	YLR220W	MEP1	P40260	492 aa		15.38	■□□□□ 0.05
CCC1	YLR220W	ARC1	P46672	376 aa	Known RBP	15.38	■□□□□ 0.05
CCC1	YLR220W	COQ5	P49017	307 aa		15.38	■□□□□ 0.05
CCC1	YLR220W	NBP35	P52920	328 aa		15.38	■□□□□ 0.05
CCC1	YLR220W	UBX3	Q12229	455 aa		15.38	■□□□□ 0.05
CCC1	YLR220W	MDY2	Q12285	212 aa		15.38	■□□□□ 0.05
CCC1	YLR220W	CDC10	P25342	322 aa	Known RBP	15.37	■□□□□ 0.05
CCC1	YLR220W	SQT1	P35184	431 aa		15.37	■□□□□ 0.05
CCC1	YLR220W	WSC4	P38739	605 aa		15.37	■□□□□ 0.05
CCC1	YLR220W	YHB1	P39676	399 aa	Known RBP	15.37	■□□□□ 0.05
CCC1	YLR220W	GAT1	P43574	510 aa		15.37	■□□□□ 0.05
CCC1	YLR220W	FAR3	P46671	204 aa		15.37	■□□□□ 0.05
CCC1	YLR220W	UBX4	P54730	416 aa		15.37	■□□□□ 0.05
CCC1	YLR220W	YML053C	Q04978	212 aa		15.37	■□□□□ 0.05
CCC1	YLR220W	UPC2	Q12151	913 aa		15.37	■□□□□ 0.05
CCC1	YLR220W	NAG1	Q8TGN9	163 aa		15.37	■□□□□ 0.05
CCC1	YLR220W	SUC2	P00724	532 aa		15.36	■□□□□ 0.05
CCC1	YLR220W	SFP1	P32432	683 aa		15.36	■□□□□ 0.05
CCC1	YLR220W	PTM1	P32857	523 aa		15.36	■□□□□ 0.05
CCC1	YLR220W	BAT1	P38891	393 aa	Known RBP	15.36	■□□□□ 0.05
CCC1	YLR220W	VPS41	P38959	992 aa		15.36	■□□□□ 0.05
CCC1	YLR220W	GIP4	P39732	760 aa		15.36	■□□□□ 0.05
CCC1	YLR220W	YFR018C	P43599	363 aa		15.36	■□□□□ 0.05

Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms