RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W ARX1Q03862 593 aaKnown RBP2.49□□□□□ -2.01
SNU114YKL173W YDR341CQ05506 607 aaKnown RBP2.49□□□□□ -2.01
SNU114YKL173W MLP2P40457 1679 aa2.49□□□□□ -2.01
SNU114YKL173W RRP7P25368 297 aaPredicted RBP2.48□□□□□ -2.01
SNU114YKL173W KRR1P25586 316 aaPredicted RBP2.48□□□□□ -2.01
SNU114YKL173W RXT2P38255 430 aa2.48□□□□□ -2.01
SNU114YKL173W YJL193WP39542 402 aa2.48□□□□□ -2.01
SNU114YKL173W BNI5P53890 448 aaKnown RBP2.48□□□□□ -2.01
SNU114YKL173W SKG3Q06315 1026 aa2.48□□□□□ -2.01
SNU114YKL173W DIA2Q08496 732 aaPredicted RBP2.48□□□□□ -2.01
SNU114YKL173W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SNU114YKL173W SEC53P07283 254 aaKnown RBP2.48□□□□□ -2.01
SNU114YKL173W STE4P18851 423 aa2.48□□□□□ -2.01
SNU114YKL173W GPI10P30777 616 aa2.48□□□□□ -2.01
SNU114YKL173W PXA2P34230 853 aa2.48□□□□□ -2.01
SNU114YKL173W MNN2P38069 597 aa2.48□□□□□ -2.01
SNU114YKL173W CBR1P38626 284 aaKnown RBP2.48□□□□□ -2.01
SNU114YKL173W YHR218WP38899 603 aa2.48□□□□□ -2.01
SNU114YKL173W YNL092WP53934 400 aa2.48□□□□□ -2.01
SNU114YKL173W YML119WQ03208 357 aa2.48□□□□□ -2.01
SNU114YKL173W EFR3Q03653 782 aaKnown RBP2.48□□□□□ -2.01
SNU114YKL173W ERB1Q04660 807 aaKnown RBP2.48□□□□□ -2.01
SNU114YKL173W CRF1Q04930 467 aa2.48□□□□□ -2.01
SNU114YKL173W AIM41Q12032 185 aa2.48□□□□□ -2.01
SNU114YKL173W HSP42Q12329 375 aa2.48□□□□□ -2.01
SNU114YKL173W NUP170P38181 1502 aa2.48□□□□□ -2.01
SNU114YKL173W RPN13O13563 156 aa2.47□□□□□ -2.01
SNU114YKL173W PMS1P14242 873 aa2.47□□□□□ -2.01
SNU114YKL173W DMC1P25453 334 aa2.47□□□□□ -2.01
SNU114YKL173W AAD3P25612 363 aa2.47□□□□□ -2.01
SNU114YKL173W DSS4P32601 143 aa2.47□□□□□ -2.01
SNU114YKL173W AUR1P36107 401 aaPredicted RBP2.47□□□□□ -2.01
SNU114YKL173W PIG2P40187 538 aa2.47□□□□□ -2.01
SNU114YKL173W PFK26P40433 827 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W SWP82P43554 623 aa2.47□□□□□ -2.01
SNU114YKL173W ROK1P45818 564 aaPredicted RBP2.47□□□□□ -2.01
SNU114YKL173W GLO1P50107 326 aa2.47□□□□□ -2.01
SNU114YKL173W ARP9Q05123 467 aa2.47□□□□□ -2.01
SNU114YKL173W CUE5Q08412 411 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W HUA2Q12134 243 aa2.47□□□□□ -2.01
SNU114YKL173W YPT6Q99260 215 aa2.47□□□□□ -2.01
SNU114YKL173W PCT1P13259 424 aa2.47□□□□□ -2.01
SNU114YKL173W STE50P25344 346 aa2.47□□□□□ -2.01
SNU114YKL173W URA7P28274 579 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W BRF1P29056 596 aa2.47□□□□□ -2.01
SNU114YKL173W CST26P38226 397 aa2.47□□□□□ -2.01
SNU114YKL173W KSP1P38691 1029 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W MUP3P38734 546 aa2.47□□□□□ -2.01
SNU114YKL173W JEM1P40358 645 aa2.47□□□□□ -2.01
SNU114YKL173W NAS2P40555 220 aa2.47□□□□□ -2.01
SNU114YKL173W ARF3P40994 183 aaRIP-Chip data2.47□□□□□ -2.01not detected
SNU114YKL173W MDE1P47095 244 aa2.47□□□□□ -2.01
SNU114YKL173W RPA49Q01080 415 aaPredicted RBP2.47□□□□□ -2.01
SNU114YKL173W NOP58Q12499 511 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W CYB2P00175 591 aa2.47□□□□□ -2.01
SNU114YKL173W TUB1P09733 447 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W VPS34P22543 875 aa2.47□□□□□ -2.01
SNU114YKL173W AMD2P22580 549 aa2.47□□□□□ -2.01
SNU114YKL173W LRE1P25579 583 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W RFA2P26754 273 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W POT1P27796 417 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SNU114YKL173W SDH8P38345 138 aa2.47□□□□□ -2.01
SNU114YKL173W OCA1P50946 238 aaPredicted RBP2.47□□□□□ -2.01
SNU114YKL173W YML122CQ03207 126 aa2.47□□□□□ -2.01
SNU114YKL173W MRD1Q06106 887 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W YDL086WQ07505 273 aa2.47□□□□□ -2.01
SNU114YKL173W YEH1Q07804 573 aa2.47□□□□□ -2.01
SNU114YKL173W BUD7Q08754 746 aa2.47□□□□□ -2.01
SNU114YKL173W RKI1Q12189 258 aa2.47□□□□□ -2.01
SNU114YKL173W PAN1P32521 1480 aa2.46□□□□□ -2.02
SNU114YKL173W SCC2Q04002 1493 aa2.46□□□□□ -2.02
SNU114YKL173W SRP54P20424 541 aaKnown RBP2.46□□□□□ -2.02
SNU114YKL173W OCA4P25366 362 aa2.46□□□□□ -2.02
SNU114YKL173W ELF1P36053 145 aa2.46□□□□□ -2.02
SNU114YKL173W STB6P36085 766 aa2.46□□□□□ -2.02
SNU114YKL173W SEC24P40482 926 aaKnown RBP2.46□□□□□ -2.02
SNU114YKL173W TCB2P48231 1178 aa2.46□□□□□ -2.02
SNU114YKL173W ASE1P50275 885 aa2.46□□□□□ -2.02
SNU114YKL173W YGL117WP53133 265 aa2.46□□□□□ -2.02
SNU114YKL173W FCP1Q03254 732 aa2.46□□□□□ -2.02
SNU114YKL173W RTT109Q07794 436 aa2.46□□□□□ -2.02
SNU114YKL173W KEL3Q08979 651 aaPredicted RBP2.46□□□□□ -2.02
SNU114YKL173W RCN2Q12044 265 aa2.46□□□□□ -2.02
SNU114YKL173W CEX1Q12453 761 aa2.46□□□□□ -2.02
SNU114YKL173W YNL162W-AQ3E7A8 72 aa2.46□□□□□ -2.02
SNU114YKL173W STE12P13574 688 aa2.46□□□□□ -2.02
SNU114YKL173W CDC43P18898 376 aa2.46□□□□□ -2.02
SNU114YKL173W RAD51P25454 400 aa2.46□□□□□ -2.02
SNU114YKL173W THI2P38141 450 aa2.46□□□□□ -2.02
SNU114YKL173W RRF1P38771 230 aa2.46□□□□□ -2.02
SNU114YKL173W UBP7P40453 1071 aa2.46□□□□□ -2.02
SNU114YKL173W IME4P41833 600 aa2.46□□□□□ -2.02
SNU114YKL173W SPC98P53540 846 aa2.46□□□□□ -2.02
SNU114YKL173W RMT2Q03305 412 aa2.46□□□□□ -2.02
SNU114YKL173W ARG7Q04728 441 aa2.46□□□□□ -2.02
SNU114YKL173W RBS1Q05672 457 aaKnown RBP2.46□□□□□ -2.02
SNU114YKL173W YSH1Q06224 779 aaPredicted RBP2.46□□□□□ -2.02
SNU114YKL173W YOL159CQ08300 171 aa2.46□□□□□ -2.02
SNU114YKL173W NBP2Q12163 236 aa2.46□□□□□ -2.02
SNU114YKL173W PAR32Q12515 295 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 75.5 ms