RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W ARX1Q03862 593 aaKnown RBP2.49□□□□□ -2.01
SNU114YKL173W YDR341CQ05506 607 aaKnown RBP2.49□□□□□ -2.01
SNU114YKL173W MLP2P40457 1679 aa2.49□□□□□ -2.01
SNU114YKL173W RRP7P25368 297 aaPredicted RBP2.48□□□□□ -2.01
SNU114YKL173W KRR1P25586 316 aaPredicted RBP2.48□□□□□ -2.01
SNU114YKL173W RXT2P38255 430 aa2.48□□□□□ -2.01
SNU114YKL173W YJL193WP39542 402 aa2.48□□□□□ -2.01
SNU114YKL173W BNI5P53890 448 aaKnown RBP2.48□□□□□ -2.01
SNU114YKL173W SKG3Q06315 1026 aa2.48□□□□□ -2.01
SNU114YKL173W DIA2Q08496 732 aaPredicted RBP2.48□□□□□ -2.01
SNU114YKL173W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SNU114YKL173W SEC53P07283 254 aaKnown RBP2.48□□□□□ -2.01
SNU114YKL173W STE4P18851 423 aa2.48□□□□□ -2.01
SNU114YKL173W GPI10P30777 616 aa2.48□□□□□ -2.01
SNU114YKL173W PXA2P34230 853 aa2.48□□□□□ -2.01
SNU114YKL173W MNN2P38069 597 aa2.48□□□□□ -2.01
SNU114YKL173W CBR1P38626 284 aaKnown RBP2.48□□□□□ -2.01
SNU114YKL173W YHR218WP38899 603 aa2.48□□□□□ -2.01
SNU114YKL173W YNL092WP53934 400 aa2.48□□□□□ -2.01
SNU114YKL173W YML119WQ03208 357 aa2.48□□□□□ -2.01
SNU114YKL173W EFR3Q03653 782 aaKnown RBP2.48□□□□□ -2.01
SNU114YKL173W ERB1Q04660 807 aaKnown RBP2.48□□□□□ -2.01
SNU114YKL173W CRF1Q04930 467 aa2.48□□□□□ -2.01
SNU114YKL173W AIM41Q12032 185 aa2.48□□□□□ -2.01
SNU114YKL173W HSP42Q12329 375 aa2.48□□□□□ -2.01
SNU114YKL173W NUP170P38181 1502 aa2.48□□□□□ -2.01
SNU114YKL173W RPN13O13563 156 aa2.47□□□□□ -2.01
SNU114YKL173W PMS1P14242 873 aa2.47□□□□□ -2.01
SNU114YKL173W DMC1P25453 334 aa2.47□□□□□ -2.01
SNU114YKL173W AAD3P25612 363 aa2.47□□□□□ -2.01
SNU114YKL173W DSS4P32601 143 aa2.47□□□□□ -2.01
SNU114YKL173W AUR1P36107 401 aaPredicted RBP2.47□□□□□ -2.01
SNU114YKL173W PIG2P40187 538 aa2.47□□□□□ -2.01
SNU114YKL173W PFK26P40433 827 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W SWP82P43554 623 aa2.47□□□□□ -2.01
SNU114YKL173W ROK1P45818 564 aaPredicted RBP2.47□□□□□ -2.01
SNU114YKL173W GLO1P50107 326 aa2.47□□□□□ -2.01
SNU114YKL173W ARP9Q05123 467 aa2.47□□□□□ -2.01
SNU114YKL173W CUE5Q08412 411 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W HUA2Q12134 243 aa2.47□□□□□ -2.01
SNU114YKL173W YPT6Q99260 215 aa2.47□□□□□ -2.01
SNU114YKL173W PCT1P13259 424 aa2.47□□□□□ -2.01
SNU114YKL173W STE50P25344 346 aa2.47□□□□□ -2.01
SNU114YKL173W URA7P28274 579 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W BRF1P29056 596 aa2.47□□□□□ -2.01
SNU114YKL173W CST26P38226 397 aa2.47□□□□□ -2.01
SNU114YKL173W KSP1P38691 1029 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W MUP3P38734 546 aa2.47□□□□□ -2.01
SNU114YKL173W JEM1P40358 645 aa2.47□□□□□ -2.01
SNU114YKL173W NAS2P40555 220 aa2.47□□□□□ -2.01
SNU114YKL173W ARF3P40994 183 aaRIP-Chip data2.47□□□□□ -2.01not detected
SNU114YKL173W MDE1P47095 244 aa2.47□□□□□ -2.01
SNU114YKL173W RPA49Q01080 415 aaPredicted RBP2.47□□□□□ -2.01
SNU114YKL173W NOP58Q12499 511 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W CYB2P00175 591 aa2.47□□□□□ -2.01
SNU114YKL173W TUB1P09733 447 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W VPS34P22543 875 aa2.47□□□□□ -2.01
SNU114YKL173W AMD2P22580 549 aa2.47□□□□□ -2.01
SNU114YKL173W LRE1P25579 583 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W RFA2P26754 273 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W POT1P27796 417 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SNU114YKL173W SDH8P38345 138 aa2.47□□□□□ -2.01
SNU114YKL173W OCA1P50946 238 aaPredicted RBP2.47□□□□□ -2.01
SNU114YKL173W YML122CQ03207 126 aa2.47□□□□□ -2.01
SNU114YKL173W MRD1Q06106 887 aaKnown RBP2.47□□□□□ -2.01
SNU114YKL173W YDL086WQ07505 273 aa2.47□□□□□ -2.01
SNU114YKL173W YEH1Q07804 573 aa2.47□□□□□ -2.01
SNU114YKL173W BUD7Q08754 746 aa2.47□□□□□ -2.01
SNU114YKL173W RKI1Q12189 258 aa2.47□□□□□ -2.01
SNU114YKL173W PAN1P32521 1480 aa2.46□□□□□ -2.02
SNU114YKL173W SCC2Q04002 1493 aa2.46□□□□□ -2.02
SNU114YKL173W SRP54P20424 541 aaKnown RBP2.46□□□□□ -2.02
SNU114YKL173W OCA4P25366 362 aa2.46□□□□□ -2.02
SNU114YKL173W ELF1P36053 145 aa2.46□□□□□ -2.02
SNU114YKL173W STB6P36085 766 aa2.46□□□□□ -2.02
SNU114YKL173W SEC24P40482 926 aaKnown RBP2.46□□□□□ -2.02
SNU114YKL173W TCB2P48231 1178 aa2.46□□□□□ -2.02
SNU114YKL173W ASE1P50275 885 aa2.46□□□□□ -2.02
SNU114YKL173W YGL117WP53133 265 aa2.46□□□□□ -2.02
SNU114YKL173W FCP1Q03254 732 aa2.46□□□□□ -2.02
SNU114YKL173W RTT109Q07794 436 aa2.46□□□□□ -2.02
SNU114YKL173W KEL3Q08979 651 aaPredicted RBP2.46□□□□□ -2.02
SNU114YKL173W RCN2Q12044 265 aa2.46□□□□□ -2.02
SNU114YKL173W CEX1Q12453 761 aa2.46□□□□□ -2.02
SNU114YKL173W YNL162W-AQ3E7A8 72 aa2.46□□□□□ -2.02
SNU114YKL173W STE12P13574 688 aa2.46□□□□□ -2.02
SNU114YKL173W CDC43P18898 376 aa2.46□□□□□ -2.02
SNU114YKL173W RAD51P25454 400 aa2.46□□□□□ -2.02
SNU114YKL173W THI2P38141 450 aa2.46□□□□□ -2.02
SNU114YKL173W RRF1P38771 230 aa2.46□□□□□ -2.02
SNU114YKL173W UBP7P40453 1071 aa2.46□□□□□ -2.02
SNU114YKL173W IME4P41833 600 aa2.46□□□□□ -2.02
SNU114YKL173W SPC98P53540 846 aa2.46□□□□□ -2.02
SNU114YKL173W RMT2Q03305 412 aa2.46□□□□□ -2.02
SNU114YKL173W ARG7Q04728 441 aa2.46□□□□□ -2.02
SNU114YKL173W RBS1Q05672 457 aaKnown RBP2.46□□□□□ -2.02
SNU114YKL173W YSH1Q06224 779 aaPredicted RBP2.46□□□□□ -2.02
SNU114YKL173W YOL159CQ08300 171 aa2.46□□□□□ -2.02
SNU114YKL173W NBP2Q12163 236 aa2.46□□□□□ -2.02
SNU114YKL173W PAR32Q12515 295 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms