RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI3	YJL176C	URB2	P47108	1174 aa		4.63	□□□□□ -1.67
SWI3	YJL176C	ARX1	Q03862	593 aa	Known RBP	4.63	□□□□□ -1.67
SWI3	YJL176C	EMI1	Q04406	187 aa		4.63	□□□□□ -1.67
SWI3	YJL176C	RCO1	Q04779	684 aa		4.63	□□□□□ -1.67
SWI3	YJL176C	YET3	Q07451	203 aa		4.63	□□□□□ -1.67
SWI3	YJL176C	TFB4	Q12004	338 aa		4.63	□□□□□ -1.67
SWI3	YJL176C	NUS1	Q12063	375 aa		4.63	□□□□□ -1.67
SWI3	YJL176C	UBR1	P19812	1950 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	ARG4	P04076	463 aa	Predicted RBP	4.62	□□□□□ -1.67
SWI3	YJL176C	ILV2	P07342	687 aa	Known RBP	4.62	□□□□□ -1.67
SWI3	YJL176C	SPS1	P08458	490 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	VAN1	P23642	535 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	CIN8	P27895	1000 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	HRR25	P29295	494 aa	Known RBP	4.62	□□□□□ -1.67
SWI3	YJL176C	GMH1	P36125	273 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	SPC97	P38863	823 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	MNN1	P39106	762 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	SSP120	P39931	234 aa	Known RBP	4.62	□□□□□ -1.67
SWI3	YJL176C	NNF1	P47149	201 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	ARP4	P80428	489 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	SPP2	Q02521	185 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	YFT2	Q06676	274 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SWI3	YJL176C	VPS68	Q12016	184 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	SRO7	Q12038	1033 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	BEM2	P39960	2167 aa	Known RBP	4.62	□□□□□ -1.67
SWI3	YJL176C	YPR089W	O13585	888 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	SSC1	P0CS90	654 aa	Known RBP	4.62	□□□□□ -1.67
SWI3	YJL176C	SBP1	P10080	294 aa	Known RBP	4.62	□□□□□ -1.67
SWI3	YJL176C	GLN4	P13188	809 aa	Known RBP	4.62	□□□□□ -1.67
SWI3	YJL176C	ILV6	P25605	309 aa	Known RBP	4.62	□□□□□ -1.67
SWI3	YJL176C	GCD11	P32481	527 aa	Known RBP	4.62	□□□□□ -1.67
SWI3	YJL176C	BEM3	P32873	1128 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	HAT2	P39984	401 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	SEC28	P40509	296 aa	Known RBP	4.62	□□□□□ -1.67
SWI3	YJL176C	BIR1	P47134	954 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	SWS2	P53937	143 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	VHS3	Q08438	674 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	TRM8	Q12009	286 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	YOR012W	Q12351	137 aa		4.62	□□□□□ -1.67
SWI3	YJL176C	ABF1	P14164	731 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	ERG6	P25087	383 aa	Known RBP	4.61	□□□□□ -1.67
SWI3	YJL176C	CYM1	P32898	989 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	TFC3	P34111	1160 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	MUD2	P36084	527 aa	Known RBP	4.61	□□□□□ -1.67
SWI3	YJL176C	MUM2	P38236	366 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	YIL108W	P40483	696 aa	Known RBP	4.61	□□□□□ -1.67
SWI3	YJL176C	BUD32	P53323	261 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	LSC1	P53598	329 aa	Known RBP	4.61	□□□□□ -1.67
SWI3	YJL176C	TRM82	Q03774	444 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	BUD22	Q04347	519 aa	Known RBP	4.61	□□□□□ -1.67
SWI3	YJL176C	RTT10	Q08924	1013 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	STE2	D6VTK4	431 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	AMD2	P22580	549 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	PHO3	P24031	467 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	MSH1	P25846	959 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	SFP1	P32432	683 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	SPR1	P32603	445 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	TIP20	P33891	701 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	RRP14	P36080	434 aa	Known RBP	4.61	□□□□□ -1.67
SWI3	YJL176C	SSN3	P39073	555 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	HOS4	P40480	1083 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	YJL107C	P42947	387 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	ZRG17	P53735	605 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	USA1	Q03714	838 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	YLR177W	Q06251	628 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	PLB3	Q08108	686 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	RTK1	Q12100	620 aa	Predicted RBP	4.61	□□□□□ -1.67
SWI3	YJL176C	KCS1	Q12494	1050 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	RGS2	Q99188	309 aa		4.61	□□□□□ -1.67
SWI3	YJL176C	TUB1	P09733	447 aa	Known RBP	4.6	□□□□□ -1.67
SWI3	YJL176C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
SWI3	YJL176C	SEC14	P24280	304 aa	Known RBP	4.6	□□□□□ -1.67
SWI3	YJL176C	YHR182W	P38870	785 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	YJL206C	P39529	758 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	LSM5	P40089	93 aa	Known RBP	4.6	□□□□□ -1.67
SWI3	YJL176C	CTK3	P46963	296 aa	Predicted RBP	4.6	□□□□□ -1.67
SWI3	YJL176C	BOL2	P53082	120 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	BIO4	P53630	237 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	ADE12	P80210	433 aa	Known RBP	4.6	□□□□□ -1.67
SWI3	YJL176C	RNT1	Q02555	471 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	TAF11	Q04226	346 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	MRH1	Q12117	320 aa	Predicted RBP	4.6	□□□□□ -1.67
SWI3	YJL176C	SLP1	Q12232	587 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	ICT1	Q12385	394 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	YMR030W-A	Q3E760	96 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	TOR2	P32600	2474 aa	Known RBP	4.6	□□□□□ -1.67
SWI3	YJL176C	YPT52	P36018	234 aa	Known RBP	4.6	□□□□□ -1.67
SWI3	YJL176C	SET3	P36124	751 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	RPF2	P36160	344 aa	Known RBP	4.6	□□□□□ -1.67
SWI3	YJL176C	UBP14	P38237	781 aa	Known RBP	4.6	□□□□□ -1.67
SWI3	YJL176C	SAP1	P39955	897 aa	Known RBP	4.6	□□□□□ -1.67
SWI3	YJL176C	HPT1	Q04178	221 aa	Known RBP	4.6	□□□□□ -1.67
SWI3	YJL176C	CRN1	Q06440	651 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	RSC3	Q06639	885 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	THI73	Q07904	523 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	YLR053C	Q12026	108 aa		4.6	□□□□□ -1.67
SWI3	YJL176C	SEC53	P07283	254 aa	Known RBP	4.59	□□□□□ -1.67
SWI3	YJL176C	RPB4	P20433	221 aa	Predicted RBP	4.59	□□□□□ -1.67
SWI3	YJL176C	SCL1	P21243	252 aa	Known RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 74.6 ms