RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W RGT2Q12300 763 aa2.3□□□□□ -2.04
SMD1YGR074W RDL1Q12305 139 aaKnown RBP2.3□□□□□ -2.04
SMD1YGR074W AQY1P0CD91 305 aa2.29□□□□□ -2.04
SMD1YGR074W RAP1P11938 827 aa2.29□□□□□ -2.04
SMD1YGR074W CBS1P14066 229 aa2.29□□□□□ -2.04
SMD1YGR074W RED1P14291 827 aa2.29□□□□□ -2.04
SMD1YGR074W MET8P15807 274 aa2.29□□□□□ -2.04
SMD1YGR074W OLE1P21147 510 aaKnown RBP2.29□□□□□ -2.04
SMD1YGR074W URE2P23202 354 aaKnown RBP2.29□□□□□ -2.04
SMD1YGR074W ADH7P25377 361 aa2.29□□□□□ -2.04
SMD1YGR074W YIH1P25637 258 aa2.29□□□□□ -2.04
SMD1YGR074W GSY2P27472 705 aa2.29□□□□□ -2.04
SMD1YGR074W YJU2P28320 278 aaPredicted RBP2.29□□□□□ -2.04
SMD1YGR074W PDB1P32473 366 aaKnown RBP2.29□□□□□ -2.04
SMD1YGR074W FTH1P38310 465 aa2.29□□□□□ -2.04
SMD1YGR074W UIP3P39547 235 aa2.29□□□□□ -2.04
SMD1YGR074W ECM10P39987 644 aa2.29□□□□□ -2.04
SMD1YGR074W SWP82P43554 623 aa2.29□□□□□ -2.04
SMD1YGR074W RPN11P43588 306 aaKnown RBP2.29□□□□□ -2.04
SMD1YGR074W CTK2P46962 323 aa2.29□□□□□ -2.04
SMD1YGR074W SGM1P47166 707 aa2.29□□□□□ -2.04
SMD1YGR074W MRX6P48564 524 aa2.29□□□□□ -2.04
SMD1YGR074W VID30P53076 958 aa2.29□□□□□ -2.04
SMD1YGR074W DSD1P53095 428 aa2.29□□□□□ -2.04
SMD1YGR074W YGL036WP53185 909 aaPredicted RBP2.29□□□□□ -2.04
SMD1YGR074W YGR127WP53275 312 aa2.29□□□□□ -2.04
SMD1YGR074W ATP23P53722 227 aa2.29□□□□□ -2.04
SMD1YGR074W MPS1P54199 764 aa2.29□□□□□ -2.04
SMD1YGR074W INA17Q02888 182 aa2.29□□□□□ -2.04
SMD1YGR074W GIR2Q03768 265 aaPredicted RBP2.29□□□□□ -2.04
SMD1YGR074W SNU56Q03782 492 aaKnown RBP2.29□□□□□ -2.04
SMD1YGR074W SYF1Q04048 859 aaPredicted RBP2.29□□□□□ -2.04
SMD1YGR074W GPN2Q08726 347 aaPredicted RBP2.29□□□□□ -2.04
SMD1YGR074W FMP40Q08968 688 aaPredicted RBP2.29□□□□□ -2.04
SMD1YGR074W RRG1Q12167 365 aaPredicted RBP2.29□□□□□ -2.04
SMD1YGR074W SCM3Q12334 223 aa2.29□□□□□ -2.04
SMD1YGR074W SFI1Q12369 946 aa2.29□□□□□ -2.04
SMD1YGR074W CET1O13297 549 aaPredicted RBP2.28□□□□□ -2.04
SMD1YGR074W CKA1P15790 372 aa2.28□□□□□ -2.04
SMD1YGR074W PWP1P21304 576 aaKnown RBP2.28□□□□□ -2.04
SMD1YGR074W YSP3P25036 478 aa2.28□□□□□ -2.04
SMD1YGR074W LCB1P25045 558 aaKnown RBP2.28□□□□□ -2.04
SMD1YGR074W YCR006CP25350 157 aa2.28□□□□□ -2.04
SMD1YGR074W GSH1P32477 678 aa2.28□□□□□ -2.04
SMD1YGR074W SEF1P34228 1148 aa2.28□□□□□ -2.04
SMD1YGR074W PXA2P34230 853 aa2.28□□□□□ -2.04
SMD1YGR074W UBP11P36026 717 aa2.28□□□□□ -2.04
SMD1YGR074W GEX2P36173 615 aa2.28□□□□□ -2.04
SMD1YGR074W ADE17P38009 592 aaKnown RBP2.28□□□□□ -2.04
SMD1YGR074W UBP13P38187 747 aa2.28□□□□□ -2.04
SMD1YGR074W DIA4P38705 446 aaPredicted RBP2.28□□□□□ -2.04
SMD1YGR074W FMP10P40098 244 aa2.28□□□□□ -2.04
SMD1YGR074W ALG5P40350 334 aa2.28□□□□□ -2.04
SMD1YGR074W PKP1P40530 394 aa2.28□□□□□ -2.04
SMD1YGR074W IRC7P43623 340 aa2.28□□□□□ -2.04
SMD1YGR074W FAR3P46671 204 aa2.28□□□□□ -2.04
SMD1YGR074W SAE2P46946 345 aa2.28□□□□□ -2.04
SMD1YGR074W TAX4P47030 604 aa2.28□□□□□ -2.04
SMD1YGR074W IRC8P47046 822 aa2.28□□□□□ -2.04
SMD1YGR074W RPS7BP48164 190 aaKnown RBP2.28□□□□□ -2.04
SMD1YGR074W UBP8P50102 471 aa2.28□□□□□ -2.04
SMD1YGR074W VPS75P53853 264 aa2.28□□□□□ -2.04
SMD1YGR074W TIM10P87108 93 aa2.28□□□□□ -2.04
SMD1YGR074W YKU80Q04437 629 aa2.28□□□□□ -2.04
SMD1YGR074W PDR8Q06149 701 aa2.28□□□□□ -2.04
SMD1YGR074W SPN1Q06505 410 aaPredicted RBP2.28□□□□□ -2.04
SMD1YGR074W RAD34Q06665 692 aa2.28□□□□□ -2.04
SMD1YGR074W YEH1Q07804 573 aa2.28□□□□□ -2.04
SMD1YGR074W LEU9Q12166 604 aaKnown RBP2.28□□□□□ -2.04
SMD1YGR074W INP53Q12271 1107 aa2.28□□□□□ -2.04
SMD1YGR074W YJR112W-AQ3E743 109 aa2.28□□□□□ -2.04
SMD1YGR074W MF(ALPHA)1P01149 165 aa2.27□□□□□ -2.05
SMD1YGR074W ARG3P05150 338 aa2.27□□□□□ -2.05
SMD1YGR074W DFR1P07807 211 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
SMD1YGR074W ERG11P10614 530 aa2.27□□□□□ -2.05
SMD1YGR074W PCT1P13259 424 aa2.27□□□□□ -2.05
SMD1YGR074W EST1P17214 699 aaPredicted RBP2.27□□□□□ -2.05
SMD1YGR074W SRP54P20424 541 aaKnown RBP2.27□□□□□ -2.05
SMD1YGR074W APN1P22936 367 aa2.27□□□□□ -2.05
SMD1YGR074W SAC1P32368 623 aaKnown RBP2.27□□□□□ -2.05
SMD1YGR074W HOT13P36078 116 aa2.27□□□□□ -2.05
SMD1YGR074W ICS2P38284 255 aa2.27□□□□□ -2.05
SMD1YGR074W NPR2P39923 615 aa2.27□□□□□ -2.05
SMD1YGR074W XBP1P40489 647 aa2.27□□□□□ -2.05
SMD1YGR074W SPO22P40511 975 aa2.27□□□□□ -2.05
SMD1YGR074W DOT5P40553 215 aa2.27□□□□□ -2.05
SMD1YGR074W SNO3P43544 222 aa2.27□□□□□ -2.05
SMD1YGR074W YFR020WP43600 232 aa2.27□□□□□ -2.05
SMD1YGR074W IRC6P43615 237 aa2.27□□□□□ -2.05
SMD1YGR074W LCL3P53153 274 aa2.27□□□□□ -2.05
SMD1YGR074W ARE2P53629 642 aaKnown RBP2.27□□□□□ -2.05
SMD1YGR074W YMR178WQ03219 274 aaKnown RBP2.27□□□□□ -2.05
SMD1YGR074W DPB4Q04603 196 aaKnown RBP2.27□□□□□ -2.05
SMD1YGR074W VPS38Q05919 439 aa2.27□□□□□ -2.05
SMD1YGR074W BSP1Q06604 576 aa2.27□□□□□ -2.05
SMD1YGR074W LUC7Q07508 261 aaPredicted RBP2.27□□□□□ -2.05
SMD1YGR074W CDC45Q08032 650 aa2.27□□□□□ -2.05
SMD1YGR074W MCH4Q08268 501 aa2.27□□□□□ -2.05
SMD1YGR074W OSW1Q08692 278 aa2.27□□□□□ -2.05
SMD1YGR074W RIM20Q12033 661 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms