RNA–Protein interactions for RNA: YFR054C

YFR054C, Transcript of Dubious open reading frame, yeastyeast

Gene YFR054C, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFR054CYFR054C YKL050CP35736 922 aa3.19□□□□□ -1.9
YFR054CYFR054C DIA4P38705 446 aaPredicted RBP3.19□□□□□ -1.9
YFR054CYFR054C UIP3P39547 235 aa3.19□□□□□ -1.9
YFR054CYFR054C NPR2P39923 615 aa3.19□□□□□ -1.9
YFR054CYFR054C PKP1P40530 394 aa3.19□□□□□ -1.9
YFR054CYFR054C RPN11P43588 306 aaKnown RBP3.19□□□□□ -1.9
YFR054CYFR054C SAE2P46946 345 aa3.19□□□□□ -1.9
YFR054CYFR054C CTK2P46962 323 aa3.19□□□□□ -1.9
YFR054CYFR054C SMC3P47037 1230 aa3.19□□□□□ -1.9
YFR054CYFR054C ORC5P50874 479 aa3.19□□□□□ -1.9
YFR054CYFR054C VID30P53076 958 aa3.19□□□□□ -1.9
YFR054CYFR054C NNF2P53253 936 aa3.19□□□□□ -1.9
YFR054CYFR054C SNU56Q03782 492 aaKnown RBP3.19□□□□□ -1.9
YFR054CYFR054C SYF1Q04048 859 aaPredicted RBP3.19□□□□□ -1.9
YFR054CYFR054C TAF11Q04226 346 aa3.19□□□□□ -1.9
YFR054CYFR054C ORM2Q06144 216 aa3.19□□□□□ -1.9
YFR054CYFR054C SPN1Q06505 410 aaPredicted RBP3.19□□□□□ -1.9
YFR054CYFR054C INP53Q12271 1107 aa3.19□□□□□ -1.9
YFR054CYFR054C SFI1Q12369 946 aa3.19□□□□□ -1.9
YFR054CYFR054C KAR3P17119 729 aa3.18□□□□□ -1.9
YFR054CYFR054C PWP1P21304 576 aaKnown RBP3.18□□□□□ -1.9
YFR054CYFR054C HOT13P36078 116 aa3.18□□□□□ -1.9
YFR054CYFR054C MUM2P38236 366 aa3.18□□□□□ -1.9
YFR054CYFR054C RGI2P40188 164 aa3.18□□□□□ -1.9
YFR054CYFR054C ATF1P40353 525 aa3.18□□□□□ -1.9
YFR054CYFR054C SPO22P40511 975 aa3.18□□□□□ -1.9
YFR054CYFR054C LCL3P53153 274 aa3.18□□□□□ -1.9
YFR054CYFR054C YGR127WP53275 312 aa3.18□□□□□ -1.9
YFR054CYFR054C PFA5Q03289 374 aa3.18□□□□□ -1.9
YFR054CYFR054C TPO3Q06451 622 aa3.18□□□□□ -1.9
YFR054CYFR054C BSP1Q06604 576 aa3.18□□□□□ -1.9
YFR054CYFR054C YEH1Q07804 573 aa3.18□□□□□ -1.9
YFR054CYFR054C CIR2Q08822 631 aa3.18□□□□□ -1.9
YFR054CYFR054C FMP40Q08968 688 aaPredicted RBP3.18□□□□□ -1.9
YFR054CYFR054C APL4Q12028 832 aa3.18□□□□□ -1.9
YFR054CYFR054C SUT2Q12286 268 aa3.18□□□□□ -1.9
YFR054CYFR054C YJR112W-AQ3E743 109 aa3.18□□□□□ -1.9
YFR054CYFR054C ARD1P07347 238 aaPredicted RBP3.17□□□□□ -1.9
YFR054CYFR054C DFR1P07807 211 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
YFR054CYFR054C TUB1P09733 447 aaKnown RBP3.17□□□□□ -1.9
YFR054CYFR054C RAP1P11938 827 aa3.17□□□□□ -1.9
YFR054CYFR054C LCB1P25045 558 aaKnown RBP3.17□□□□□ -1.9
YFR054CYFR054C YCR006CP25350 157 aa3.17□□□□□ -1.9
YFR054CYFR054C ORC2P32833 620 aa3.17□□□□□ -1.9
YFR054CYFR054C UBP11P36026 717 aa3.17□□□□□ -1.9
YFR054CYFR054C SRO77P38163 1010 aa3.17□□□□□ -1.9
YFR054CYFR054C YFR020WP43600 232 aa3.17□□□□□ -1.9
YFR054CYFR054C FAR3P46671 204 aa3.17□□□□□ -1.9
YFR054CYFR054C TAX4P47030 604 aa3.17□□□□□ -1.9
YFR054CYFR054C IRC8P47046 822 aa3.17□□□□□ -1.9
YFR054CYFR054C BPL1P48445 690 aaPredicted RBP3.17□□□□□ -1.9
YFR054CYFR054C YPR003CP53394 754 aa3.17□□□□□ -1.9
YFR054CYFR054C ATP23P53722 227 aa3.17□□□□□ -1.9
YFR054CYFR054C LUC7Q07508 261 aaPredicted RBP3.17□□□□□ -1.9
YFR054CYFR054C LEU9Q12166 604 aaKnown RBP3.17□□□□□ -1.9
YFR054CYFR054C RRG1Q12167 365 aaPredicted RBP3.17□□□□□ -1.9
YFR054CYFR054C ERP4Q12450 207 aa3.17□□□□□ -1.9
YFR054CYFR054C MF(ALPHA)1P01149 165 aa3.16□□□□□ -1.9
YFR054CYFR054C MET17P06106 444 aa3.16□□□□□ -1.9
YFR054CYFR054C PET111P08468 800 aa3.16□□□□□ -1.9
YFR054CYFR054C URE2P23202 354 aaKnown RBP3.16□□□□□ -1.9
YFR054CYFR054C SEF1P34228 1148 aa3.16□□□□□ -1.9
YFR054CYFR054C RIX1P38883 763 aaPredicted RBP3.16□□□□□ -1.9
YFR054CYFR054C ALG5P40350 334 aa3.16□□□□□ -1.9
YFR054CYFR054C DOT5P40553 215 aa3.16□□□□□ -1.9
YFR054CYFR054C PTR3P43606 678 aa3.16□□□□□ -1.9
YFR054CYFR054C LYS4P49367 693 aaPredicted RBP3.16□□□□□ -1.9
YFR054CYFR054C YMR178WQ03219 274 aaKnown RBP3.16□□□□□ -1.9
YFR054CYFR054C DPB4Q04603 196 aaKnown RBP3.16□□□□□ -1.9
YFR054CYFR054C UTP21Q06078 939 aaPredicted RBP3.16□□□□□ -1.9
YFR054CYFR054C MCH4Q08268 501 aa3.16□□□□□ -1.9
YFR054CYFR054C BUD7Q08754 746 aa3.16□□□□□ -1.9
YFR054CYFR054C SPE4Q12455 300 aa3.16□□□□□ -1.9
YFR054CYFR054C YPT6Q99260 215 aa3.16□□□□□ -1.9
YFR054CYFR054C ERG11P10614 530 aa3.15□□□□□ -1.91
YFR054CYFR054C HOM2P13663 365 aaKnown RBP3.15□□□□□ -1.91
YFR054CYFR054C EST1P17214 699 aaPredicted RBP3.15□□□□□ -1.91
YFR054CYFR054C MAK32P23060 363 aa3.15□□□□□ -1.91
YFR054CYFR054C SAC1P32368 623 aaKnown RBP3.15□□□□□ -1.91
YFR054CYFR054C NPL6P32832 435 aa3.15□□□□□ -1.91
YFR054CYFR054C PXA2P34230 853 aa3.15□□□□□ -1.91
YFR054CYFR054C OCT1P35999 772 aa3.15□□□□□ -1.91
YFR054CYFR054C SNU114P36048 1008 aaKnown RBP3.15□□□□□ -1.91
YFR054CYFR054C CUE2P36075 443 aaKnown RBP3.15□□□□□ -1.91
YFR054CYFR054C ICS2P38284 255 aa3.15□□□□□ -1.91
YFR054CYFR054C IMD2P38697 523 aaKnown RBP3.15□□□□□ -1.91
YFR054CYFR054C TPA1P40032 644 aaKnown RBP3.15□□□□□ -1.91
YFR054CYFR054C CIN1P40987 1014 aa3.15□□□□□ -1.91
YFR054CYFR054C IRC7P43623 340 aa3.15□□□□□ -1.91
YFR054CYFR054C IMD3P50095 523 aaKnown RBP3.15□□□□□ -1.91
YFR054CYFR054C UBP8P50102 471 aa3.15□□□□□ -1.91
YFR054CYFR054C MAK10Q02197 733 aa3.15□□□□□ -1.91
YFR054CYFR054C VPS38Q05919 439 aa3.15□□□□□ -1.91
YFR054CYFR054C PDR8Q06149 701 aa3.15□□□□□ -1.91
YFR054CYFR054C YLR455WQ06188 304 aa3.15□□□□□ -1.91
YFR054CYFR054C RIM20Q12033 661 aa3.15□□□□□ -1.91
YFR054CYFR054C ATG9Q12142 997 aa3.15□□□□□ -1.91
YFR054CYFR054C GET3Q12154 354 aaKnown RBP3.15□□□□□ -1.91
YFR054CYFR054C AVL9Q12500 764 aa3.15□□□□□ -1.91
YFR054CYFR054C KRS1P15180 591 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms