RNA–Protein interactions for RNA: YER161C

SPT2, Transcript of Protein involved in negative regulation of transcription, yeastyeast

Gene SPT2, Length 1,002 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT2YER161C YIL077CP40508 320 aa3.52□□□□□ -1.85
SPT2YER161C THI6P41835 540 aa3.52□□□□□ -1.85
SPT2YER161C AAD10P47182 288 aa3.52□□□□□ -1.85
SPT2YER161C JJJ1P53863 590 aa3.52□□□□□ -1.85
SPT2YER161C YML037CQ03703 340 aa3.52□□□□□ -1.85
SPT2YER161C YDR239CQ03780 787 aa3.52□□□□□ -1.85
SPT2YER161C RIM13Q03792 727 aa3.52□□□□□ -1.85
SPT2YER161C YMR111CQ04461 462 aaPredicted RBP3.52□□□□□ -1.85
SPT2YER161C CRF1Q04930 467 aa3.52□□□□□ -1.85
SPT2YER161C OSW1Q08692 278 aa3.52□□□□□ -1.85
SPT2YER161C YOR019WQ99248 730 aa3.52□□□□□ -1.85
SPT2YER161C YCF1P39109 1515 aaKnown RBP3.51□□□□□ -1.85
SPT2YER161C CET1O13297 549 aaPredicted RBP3.51□□□□□ -1.85
SPT2YER161C TUF1P02992 437 aaKnown RBP3.51□□□□□ -1.85
SPT2YER161C HOM2P13663 365 aaKnown RBP3.51□□□□□ -1.85
SPT2YER161C PRP28P23394 588 aa3.51□□□□□ -1.85
SPT2YER161C ERV1P27882 189 aa3.51□□□□□ -1.85
SPT2YER161C AUR1P36107 401 aaPredicted RBP3.51□□□□□ -1.85
SPT2YER161C RRF1P38771 230 aa3.51□□□□□ -1.85
SPT2YER161C YHR097CP38809 366 aaKnown RBP3.51□□□□□ -1.85
SPT2YER161C MIT1P40002 666 aa3.51□□□□□ -1.85
SPT2YER161C TMN3P40071 706 aa3.51□□□□□ -1.85
SPT2YER161C MET18P40469 1032 aa3.51□□□□□ -1.85
SPT2YER161C SGN1P40561 250 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
SPT2YER161C GAT1P43574 510 aa3.51□□□□□ -1.85
SPT2YER161C MTG1Q03151 367 aaPredicted RBP3.51□□□□□ -1.85
SPT2YER161C SEG1Q04279 960 aa3.51□□□□□ -1.85
SPT2YER161C ECM22Q05958 814 aaPredicted RBP3.51□□□□□ -1.85
SPT2YER161C YDL073WQ07454 984 aa3.51□□□□□ -1.85
SPT2YER161C SPE3Q12074 293 aaKnown RBP3.51□□□□□ -1.85
SPT2YER161C CTF3Q12748 733 aa3.51□□□□□ -1.85
SPT2YER161C VCX1Q99385 411 aa3.51□□□□□ -1.85
SPT2YER161C EST1P17214 699 aaPredicted RBP3.5□□□□□ -1.85
SPT2YER161C VPS34P22543 875 aa3.5□□□□□ -1.85
SPT2YER161C FUB1P25659 250 aa3.5□□□□□ -1.85
SPT2YER161C PUP2P32379 260 aa3.5□□□□□ -1.85
SPT2YER161C BCS1P32839 456 aa3.5□□□□□ -1.85
SPT2YER161C YPT7P32939 208 aa3.5□□□□□ -1.85
SPT2YER161C CST26P38226 397 aa3.5□□□□□ -1.85
SPT2YER161C VID24P38263 362 aa3.5□□□□□ -1.85
SPT2YER161C GND1P38720 489 aaKnown RBP3.5□□□□□ -1.85
SPT2YER161C YHR054CP38780 354 aa3.5□□□□□ -1.85
SPT2YER161C PAC2P39937 518 aa3.5□□□□□ -1.85
SPT2YER161C SLZ1P40167 298 aa3.5□□□□□ -1.85
SPT2YER161C IME4P41833 600 aa3.5□□□□□ -1.85
SPT2YER161C BUD27P43573 796 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
SPT2YER161C LYS4P49367 693 aaPredicted RBP3.5□□□□□ -1.85
SPT2YER161C COS12P53053 380 aa3.5□□□□□ -1.85
SPT2YER161C INN1P53901 409 aa3.5□□□□□ -1.85
SPT2YER161C YNL058CP53947 316 aa3.5□□□□□ -1.85
SPT2YER161C MUB1Q03162 620 aa3.5□□□□□ -1.85
SPT2YER161C NGL2Q03264 515 aaKnown RBP3.5□□□□□ -1.85
SPT2YER161C DPB4Q04603 196 aaKnown RBP3.5□□□□□ -1.85
SPT2YER161C ROY1Q04847 553 aa3.5□□□□□ -1.85
SPT2YER161C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
SPT2YER161C BUD7Q08754 746 aa3.5□□□□□ -1.85
SPT2YER161C YML133CQ03099 1374 aa3.5□□□□□ -1.85
SPT2YER161C YLL067CQ07888 1374 aa3.5□□□□□ -1.85
SPT2YER161C YLL066CQ99208 1374 aa3.5□□□□□ -1.85
SPT2YER161C GAL80P04387 435 aa3.49□□□□□ -1.85
SPT2YER161C YML002WP0CF17 737 aa3.49□□□□□ -1.85
SPT2YER161C RPL3P14126 387 aaKnown RBP3.49□□□□□ -1.85
SPT2YER161C VPS33P20795 691 aa3.49□□□□□ -1.85
SPT2YER161C POT1P27796 417 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SPT2YER161C URA7P28274 579 aaKnown RBP3.49□□□□□ -1.85
SPT2YER161C DSS4P32601 143 aa3.49□□□□□ -1.85
SPT2YER161C KSP1P38691 1029 aaKnown RBP3.49□□□□□ -1.85
SPT2YER161C MUP3P38734 546 aa3.49□□□□□ -1.85
SPT2YER161C OTU2P38747 307 aaKnown RBP3.49□□□□□ -1.85
SPT2YER161C ERC1P38767 581 aa3.49□□□□□ -1.85
SPT2YER161C YJL193WP39542 402 aa3.49□□□□□ -1.85
SPT2YER161C RTT105P40063 208 aa3.49□□□□□ -1.85
SPT2YER161C SCS3P53012 380 aa3.49□□□□□ -1.85
SPT2YER161C NMA2P53204 395 aa3.49□□□□□ -1.85
SPT2YER161C YGR066CP53242 292 aa3.49□□□□□ -1.85
SPT2YER161C HST1P53685 503 aa3.49□□□□□ -1.85
SPT2YER161C TOF1P53840 1238 aa3.49□□□□□ -1.85
SPT2YER161C EFR3Q03653 782 aaKnown RBP3.49□□□□□ -1.85
SPT2YER161C ARX1Q03862 593 aaKnown RBP3.49□□□□□ -1.85
SPT2YER161C BUD22Q04347 519 aaKnown RBP3.49□□□□□ -1.85
SPT2YER161C VPS38Q05919 439 aa3.49□□□□□ -1.85
SPT2YER161C SPH1Q06160 661 aa3.49□□□□□ -1.85
SPT2YER161C LUC7Q07508 261 aaPredicted RBP3.49□□□□□ -1.85
SPT2YER161C YEH1Q07804 573 aa3.49□□□□□ -1.85
SPT2YER161C SWT1Q12104 458 aa3.49□□□□□ -1.85
SPT2YER161C SPE4Q12455 300 aa3.49□□□□□ -1.85
SPT2YER161C YJR112W-AQ3E743 109 aa3.49□□□□□ -1.85
SPT2YER161C TY2B-LR1P0C2J3 1770 aa3.48□□□□□ -1.85
SPT2YER161C TY2B-FP0CX63 1770 aa3.48□□□□□ -1.85
SPT2YER161C TY2B-GR2P0CX64 1770 aa3.48□□□□□ -1.85
SPT2YER161C TY2B-CP25384 1770 aa3.48□□□□□ -1.85
SPT2YER161C TY2B-DR2Q03494 1770 aa3.48□□□□□ -1.85
SPT2YER161C TY1B-DR1Q03855 1755 aa3.48□□□□□ -1.85
SPT2YER161C TY2B-DR3Q07791 1770 aaKnown RBP3.48□□□□□ -1.85
SPT2YER161C TY2B-OR1Q12113 1770 aa3.48□□□□□ -1.85
SPT2YER161C TY2B-DR1Q12472 1770 aa3.48□□□□□ -1.85
SPT2YER161C TY2B-OR2Q12501 1770 aa3.48□□□□□ -1.85
SPT2YER161C YPK9Q12697 1472 aa3.48□□□□□ -1.85
SPT2YER161C YBR085C-AO43137 85 aa3.48□□□□□ -1.85
SPT2YER161C DFR1P07807 211 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms