RNA–Protein interactions for RNA: YER104W

RTT105, Transcript of Protein with a role in regulation of Ty1 transposition, yeastyeast

Gene RTT105, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT105YER104W HES1P35843 434 aa3.22□□□□□ -1.89
RTT105YER104W APE3P37302 537 aaKnown RBP3.22□□□□□ -1.89
RTT105YER104W YHR097CP38809 366 aaKnown RBP3.22□□□□□ -1.89
RTT105YER104W GDI1P39958 451 aaKnown RBP3.22□□□□□ -1.89
RTT105YER104W MAM1P40065 302 aa3.22□□□□□ -1.89
RTT105YER104W SEC28P40509 296 aaKnown RBP3.22□□□□□ -1.89
RTT105YER104W BUD27P43573 796 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
RTT105YER104W YJL055WP47044 245 aa3.22□□□□□ -1.89
RTT105YER104W VID30P53076 958 aa3.22□□□□□ -1.89
RTT105YER104W ART5P53244 586 aaKnown RBP3.22□□□□□ -1.89
RTT105YER104W DIP5P53388 608 aa3.22□□□□□ -1.89
RTT105YER104W DCP2P53550 970 aaKnown RBP3.22□□□□□ -1.89
RTT105YER104W SNF12P53628 566 aa3.22□□□□□ -1.89
RTT105YER104W ATG4P53867 494 aa3.22□□□□□ -1.89
RTT105YER104W YAT1P80235 687 aa3.22□□□□□ -1.89
RTT105YER104W APM1Q00776 475 aaPredicted RBP3.22□□□□□ -1.89
RTT105YER104W BUD22Q04347 519 aaKnown RBP3.22□□□□□ -1.89
RTT105YER104W RQC1Q05468 723 aaKnown RBP3.22□□□□□ -1.89
RTT105YER104W YDR286CQ05530 114 aa3.22□□□□□ -1.89
RTT105YER104W VPS38Q05919 439 aa3.22□□□□□ -1.89
RTT105YER104W CRT10Q08226 957 aa3.22□□□□□ -1.89
RTT105YER104W GPN2Q08726 347 aaPredicted RBP3.22□□□□□ -1.89
RTT105YER104W BUD7Q08754 746 aa3.22□□□□□ -1.89
RTT105YER104W BMS1Q08965 1183 aaKnown RBP3.22□□□□□ -1.89
RTT105YER104W YPL272CQ08984 517 aa3.22□□□□□ -1.89
RTT105YER104W ATG29Q12092 213 aa3.22□□□□□ -1.89
RTT105YER104W RKI1Q12189 258 aa3.22□□□□□ -1.89
RTT105YER104W TAF3Q12297 353 aa3.22□□□□□ -1.89
RTT105YER104W PAR32Q12515 295 aaKnown RBP3.22□□□□□ -1.89
RTT105YER104W RPN13O13563 156 aa3.21□□□□□ -1.9
RTT105YER104W CYB2P00175 591 aa3.21□□□□□ -1.9
RTT105YER104W AAC1P04710 309 aa3.21□□□□□ -1.9
RTT105YER104W MDH1P17505 334 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
RTT105YER104W VMA16P23968 213 aa3.21□□□□□ -1.9
RTT105YER104W RFA2P26754 273 aaKnown RBP3.21□□□□□ -1.9
RTT105YER104W CNE1P27825 502 aa3.21□□□□□ -1.9
RTT105YER104W SYN8P31377 255 aa3.21□□□□□ -1.9
RTT105YER104W DPH2P32461 534 aa3.21□□□□□ -1.9
RTT105YER104W CMC1P36064 111 aa3.21□□□□□ -1.9
RTT105YER104W RPF2P36160 344 aaKnown RBP3.21□□□□□ -1.9
RTT105YER104W PHM8P40025 321 aa3.21□□□□□ -1.9
RTT105YER104W LAS21P40367 830 aa3.21□□□□□ -1.9
RTT105YER104W DOT5P40553 215 aa3.21□□□□□ -1.9
RTT105YER104W RPN11P43588 306 aaKnown RBP3.21□□□□□ -1.9
RTT105YER104W CTK2P46962 323 aa3.21□□□□□ -1.9
RTT105YER104W UBX6P47049 396 aa3.21□□□□□ -1.9
RTT105YER104W MSY1P48527 492 aa3.21□□□□□ -1.9
RTT105YER104W LYS4P49367 693 aaPredicted RBP3.21□□□□□ -1.9
RTT105YER104W LCL3P53153 274 aa3.21□□□□□ -1.9
RTT105YER104W BOP3P53958 396 aa3.21□□□□□ -1.9
RTT105YER104W PEX25Q02969 394 aa3.21□□□□□ -1.9
RTT105YER104W MRD1Q06106 887 aaKnown RBP3.21□□□□□ -1.9
RTT105YER104W CRN1Q06440 651 aa3.21□□□□□ -1.9
RTT105YER104W FMP40Q08968 688 aaPredicted RBP3.21□□□□□ -1.9
RTT105YER104W AVL9Q12500 764 aa3.21□□□□□ -1.9
RTT105YER104W CHO2P05374 869 aaKnown RBP3.2□□□□□ -1.9
RTT105YER104W ARD1P07347 238 aaPredicted RBP3.2□□□□□ -1.9
RTT105YER104W YPK1P12688 680 aaKnown RBP3.2□□□□□ -1.9
RTT105YER104W STE12P13574 688 aa3.2□□□□□ -1.9
RTT105YER104W APE1P14904 514 aa3.2□□□□□ -1.9
RTT105YER104W DAL5P15365 543 aa3.2□□□□□ -1.9
RTT105YER104W CLC1P17891 233 aa3.2□□□□□ -1.9
RTT105YER104W YSP3P25036 478 aa3.2□□□□□ -1.9
RTT105YER104W AAD3P25612 363 aa3.2□□□□□ -1.9
RTT105YER104W YCR051WP25631 222 aa3.2□□□□□ -1.9
RTT105YER104W PAP1P29468 568 aaKnown RBP3.2□□□□□ -1.9
RTT105YER104W MRE11P32829 692 aa3.2□□□□□ -1.9
RTT105YER104W NTR2P36118 322 aaPredicted RBP3.2□□□□□ -1.9
RTT105YER104W AAP1P37898 856 aaKnown RBP3.2□□□□□ -1.9
RTT105YER104W KSP1P38691 1029 aaKnown RBP3.2□□□□□ -1.9
RTT105YER104W ERC1P38767 581 aa3.2□□□□□ -1.9
RTT105YER104W BDH2P39713 417 aa3.2□□□□□ -1.9
RTT105YER104W LCB2P40970 561 aa3.2□□□□□ -1.9
RTT105YER104W CCT7P42943 550 aaKnown RBP3.2□□□□□ -1.9
RTT105YER104W SWP82P43554 623 aa3.2□□□□□ -1.9
RTT105YER104W PET130P47065 347 aa3.2□□□□□ -1.9
RTT105YER104W MPP10P47083 593 aaKnown RBP3.2□□□□□ -1.9
RTT105YER104W NMA2P53204 395 aa3.2□□□□□ -1.9
RTT105YER104W TWF1P53250 332 aa3.2□□□□□ -1.9
RTT105YER104W BNI5P53890 448 aaKnown RBP3.2□□□□□ -1.9
RTT105YER104W YNL092WP53934 400 aa3.2□□□□□ -1.9
RTT105YER104W OAZ1Q02803 292 aa3.2□□□□□ -1.9
RTT105YER104W YDR239CQ03780 787 aa3.2□□□□□ -1.9
RTT105YER104W ARG7Q04728 441 aa3.2□□□□□ -1.9
RTT105YER104W SWA2Q06677 668 aa3.2□□□□□ -1.9
RTT105YER104W YDL073WQ07454 984 aa3.2□□□□□ -1.9
RTT105YER104W YDL242WQ07746 117 aa3.2□□□□□ -1.9
RTT105YER104W YPL191CQ08930 360 aa3.2□□□□□ -1.9
RTT105YER104W SMF3Q12078 473 aaPredicted RBP3.2□□□□□ -1.9
RTT105YER104W COX1P00401 534 aa3.19□□□□□ -1.9
RTT105YER104W MF(ALPHA)1P01149 165 aa3.19□□□□□ -1.9
RTT105YER104W GAL80P04387 435 aa3.19□□□□□ -1.9
RTT105YER104W HXK2P04807 486 aaKnown RBP3.19□□□□□ -1.9
RTT105YER104W VMA2P16140 517 aaKnown RBP3.19□□□□□ -1.9
RTT105YER104W STE4P18851 423 aa3.19□□□□□ -1.9
RTT105YER104W AMD2P22580 549 aa3.19□□□□□ -1.9
RTT105YER104W CPR2P23285 205 aa3.19□□□□□ -1.9
RTT105YER104W ADH7P25377 361 aa3.19□□□□□ -1.9
RTT105YER104W URA7P28274 579 aaKnown RBP3.19□□□□□ -1.9
RTT105YER104W LAC1P28496 418 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms