RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C SPP2Q02521 185 aa2.27□□□□□ -2.05
SSD1YDR293C SLD5Q03406 294 aa2.27□□□□□ -2.05
SSD1YDR293C YDR514CQ04408 483 aa2.27□□□□□ -2.05
SSD1YDR293C TAF9Q05027 157 aa2.27□□□□□ -2.05
SSD1YDR293C NOP12Q08208 459 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C RPS21BQ3E754 87 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C ECM3Q99252 613 aa2.27□□□□□ -2.05
SSD1YDR293C HEM2P05373 342 aa2.27□□□□□ -2.05
SSD1YDR293C PRP6P19735 899 aaPredicted RBP2.27□□□□□ -2.05
SSD1YDR293C SDH2P21801 266 aa2.27□□□□□ -2.05
SSD1YDR293C EMC1P25574 760 aa2.27□□□□□ -2.05
SSD1YDR293C TRK2P28584 889 aa2.27□□□□□ -2.05
SSD1YDR293C MCM10P32354 571 aa2.27□□□□□ -2.05
SSD1YDR293C MVD1P32377 396 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C SEC66P33754 206 aa2.27□□□□□ -2.05
SSD1YDR293C KES1P35844 434 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C YPT52P36018 234 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C FRE2P36033 711 aa2.27□□□□□ -2.05
SSD1YDR293C CTP1P38152 299 aa2.27□□□□□ -2.05
SSD1YDR293C MTG2P38860 518 aa2.27□□□□□ -2.05
SSD1YDR293C SSN3P39073 555 aa2.27□□□□□ -2.05
SSD1YDR293C HAT2P39984 401 aa2.27□□□□□ -2.05
SSD1YDR293C THO1P40040 218 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C RTT101P47050 842 aa2.27□□□□□ -2.05
SSD1YDR293C BNA1P47096 177 aa2.27□□□□□ -2.05
SSD1YDR293C DIA3P52290 468 aa2.27□□□□□ -2.05
SSD1YDR293C ALT1P52893 592 aa2.27□□□□□ -2.05
SSD1YDR293C MAL11P53048 616 aa2.27□□□□□ -2.05
SSD1YDR293C YGR035CP53222 116 aa2.27□□□□□ -2.05
SSD1YDR293C YTP1P53584 459 aa2.27□□□□□ -2.05
SSD1YDR293C UGO1Q03327 502 aa2.27□□□□□ -2.05
SSD1YDR293C TRS130Q03660 1102 aa2.27□□□□□ -2.05
SSD1YDR293C INP2Q03824 705 aa2.27□□□□□ -2.05
SSD1YDR293C LRS4Q04087 347 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C GSF2Q04697 403 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C YMR226CQ05016 267 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C RSA3Q05942 220 aaKnown RBP2.27□□□□□ -2.05
SSD1YDR293C COS7Q07788 383 aa2.27□□□□□ -2.05
SSD1YDR293C YEH1Q07804 573 aa2.27□□□□□ -2.05
SSD1YDR293C GET4Q12125 312 aa2.27□□□□□ -2.05
SSD1YDR293C ERP3Q12403 225 aa2.27□□□□□ -2.05
SSD1YDR293C PRC1P00729 532 aa2.26□□□□□ -2.05
SSD1YDR293C HOM3P10869 527 aa2.26□□□□□ -2.05
SSD1YDR293C FBA1P14540 359 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C PHO81P17442 1178 aa2.26□□□□□ -2.05
SSD1YDR293C RNR1P21524 888 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C KIN82P25341 720 aa2.26□□□□□ -2.05
SSD1YDR293C RPC19P28000 142 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C PAP1P29468 568 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C FUN30P31380 1131 aa2.26□□□□□ -2.05
SSD1YDR293C UTR4P32626 227 aa2.26□□□□□ -2.05
SSD1YDR293C HBS1P32769 611 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C NUF2P33895 451 aa2.26□□□□□ -2.05
SSD1YDR293C CTF13P35203 478 aa2.26□□□□□ -2.05
SSD1YDR293C TSC10P38342 320 aa2.26□□□□□ -2.05
SSD1YDR293C ASG1P40467 964 aa2.26□□□□□ -2.05
SSD1YDR293C GSM1P42950 618 aa2.26□□□□□ -2.05
SSD1YDR293C MRM2P53123 320 aa2.26□□□□□ -2.05
SSD1YDR293C BRE5P53741 515 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C ALG11P53954 548 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C UBP2Q01476 1272 aa2.26□□□□□ -2.05
SSD1YDR293C YKU80Q04437 629 aa2.26□□□□□ -2.05
SSD1YDR293C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05 RIP-Chip
SSD1YDR293C RGS2Q99188 309 aa2.26□□□□□ -2.05
SSD1YDR293C IZH4Q99393 312 aa2.26□□□□□ -2.05
SSD1YDR293C SAN1P22470 610 aa2.26□□□□□ -2.05
SSD1YDR293C ASF2P32448 525 aaPredicted RBP2.26□□□□□ -2.05
SSD1YDR293C SRB2P34162 210 aa2.26□□□□□ -2.05
SSD1YDR293C TSA1P34760 196 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C RFC3P38629 340 aa2.26□□□□□ -2.05
SSD1YDR293C FAA2P39518 744 aa2.26□□□□□ -2.05
SSD1YDR293C NUP60P39705 539 aa2.26□□□□□ -2.05
SSD1YDR293C YAT2P40017 923 aa2.26□□□□□ -2.05
SSD1YDR293C SEC27P41811 889 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C BRE2P43132 505 aa2.26□□□□□ -2.05
SSD1YDR293C NOP9P47077 666 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C PAN2P53010 1115 aaPredicted RBP2.26□□□□□ -2.05
SSD1YDR293C NPY1P53164 384 aa2.26□□□□□ -2.05
SSD1YDR293C NOP19P53317 196 aaPredicted RBP2.26□□□□□ -2.05
SSD1YDR293C ADE12P80210 433 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
SSD1YDR293C MSC2Q03455 724 aa2.26□□□□□ -2.05
SSD1YDR293C CLU1Q03690 1277 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C USA1Q03714 838 aa2.26□□□□□ -2.05
SSD1YDR293C YDR338CQ05497 695 aa2.26□□□□□ -2.05
SSD1YDR293C LDB18Q07887 179 aa2.26□□□□□ -2.05
SSD1YDR293C THI20Q08224 551 aa2.26□□□□□ -2.05
SSD1YDR293C SVS1Q12254 260 aa2.26□□□□□ -2.05
SSD1YDR293C GLO4Q12320 285 aa2.26□□□□□ -2.05
SSD1YDR293C YOR012WQ12351 137 aa2.26□□□□□ -2.05
SSD1YDR293C OCA6Q12454 224 aa2.26□□□□□ -2.05
SSD1YDR293C CAR1P00812 333 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C BI2P03873 423 aa2.26□□□□□ -2.05
SSD1YDR293C GPH1P06738 902 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C KRS1P15180 591 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C MET8P15807 274 aa2.26□□□□□ -2.05
SSD1YDR293C FUR1P18562 216 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C DBP2P24783 546 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C CDC48P25694 835 aaKnown RBP2.26□□□□□ -2.05
SSD1YDR293C AEP1P32493 518 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 60.2 ms