RNA–Protein interactions for RNA: YBR035C

PDX3, Transcript of Pyridoxine (pyridoxamine) phosphate oxidase, yeast

Gene PDX3, Length 687 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDX3	YBR035C	CBS1	P14066	229 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	TUP1	P16649	713 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	PET123	P17558	318 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	SRP54	P20424	541 aa	Known RBP	4.9	□□□□□ -1.63
PDX3	YBR035C	PWP1	P21304	576 aa	Known RBP	4.9	□□□□□ -1.63
PDX3	YBR035C	MSB1	P21339	1137 aa	Known RBP	4.9	□□□□□ -1.63
PDX3	YBR035C	MRPL25	P23369	157 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	ERG8	P24521	451 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	MNE1	P24720	663 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	DEP1	P31385	405 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	EFT1	P32324	842 aa	Known RBP	4.9	□□□□□ -1.63
PDX3	YBR035C	EHT1	P38295	451 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	STB5	P38699	743 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	SKP2	P42843	763 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	SHE10	P53075	577 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	GTF1	P53260	183 aa	Predicted RBP	4.9	□□□□□ -1.63
PDX3	YBR035C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
PDX3	YBR035C	NRG1	Q03125	231 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	YML119W	Q03208	357 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	CLU1	Q03690	1277 aa	Known RBP	4.9	□□□□□ -1.63
PDX3	YBR035C	GAD1	Q04792	585 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	ATG38	Q05789	226 aa	Known RBP	4.9	□□□□□ -1.63
PDX3	YBR035C	YLR345W	Q06137	509 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	HMI1	Q12039	706 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	SMF3	Q12078	473 aa	Predicted RBP	4.9	□□□□□ -1.63
PDX3	YBR035C	LYS21	Q12122	440 aa	Known RBP	4.9	□□□□□ -1.63
PDX3	YBR035C	GLE1	Q12315	538 aa		4.9	□□□□□ -1.63
PDX3	YBR035C	ERG27	Q12452	347 aa	Known RBP	4.9	□□□□□ -1.63
PDX3	YBR035C	MATALPHA2	P0CY08	210 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	HMLALPHA2	P0CY09	210 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	KAR3	P17119	729 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	ERG6	P25087	383 aa	Known RBP	4.89	□□□□□ -1.63
PDX3	YBR035C	PHO84	P25297	587 aa	Known RBP	4.89	□□□□□ -1.63
PDX3	YBR035C	ADK2	P26364	225 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	GPI10	P30777	616 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	ALY1	P36117	915 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	TDP1	P38319	544 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	SAF1	P38352	637 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	RRF1	P38771	230 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	GDI1	P39958	451 aa	Known RBP	4.89	□□□□□ -1.63
PDX3	YBR035C	YER034W	P40022	185 aa	Known RBP	4.89	□□□□□ -1.63
PDX3	YBR035C	EPL1	P43572	832 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	MET12	P46151	657 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	AAD10	P47182	288 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	ASE1	P50275	885 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	SGF73	P53165	657 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	FMP30	Q02883	468 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	PNG1	Q02890	363 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	YML037C	Q03703	340 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	DBP9	Q06218	594 aa	Known RBP	4.89	□□□□□ -1.63
PDX3	YBR035C	SUE1	Q06524	206 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	TMA16	Q08687	178 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
PDX3	YBR035C	PAR32	Q12515	295 aa	Known RBP	4.89	□□□□□ -1.63
PDX3	YBR035C	HRP1	Q99383	534 aa	Known RBP	4.89	□□□□□ -1.63
PDX3	YBR035C	FKS1	P38631	1876 aa	Known RBP	4.89	□□□□□ -1.63
PDX3	YBR035C	ECM29	P38737	1868 aa		4.89	□□□□□ -1.63
PDX3	YBR035C	VPS33	P20795	691 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	RNR3	P21672	869 aa	Known RBP	4.88	□□□□□ -1.63
PDX3	YBR035C	STE50	P25344	346 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	PRE2	P30656	287 aa	Known RBP	4.88	□□□□□ -1.63
PDX3	YBR035C	DCG1	P32460	244 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	PGM1	P33401	570 aa	Known RBP	4.88	□□□□□ -1.63
PDX3	YBR035C	LTV1	P34078	463 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	CCL1	P37366	393 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	ARB1	P40024	610 aa	Known RBP	4.88	□□□□□ -1.63
PDX3	YBR035C	GET2	P40056	285 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	RTT105	P40063	208 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	IDS2	P46958	469 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	PRY1	P47032	299 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	TAM41	P53230	385 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	ART5	P53244	586 aa	Known RBP	4.88	□□□□□ -1.63
PDX3	YBR035C	OGG1	P53397	376 aa	Predicted RBP	4.88	□□□□□ -1.63
PDX3	YBR035C	TEX1	P53851	422 aa	Known RBP	4.88	□□□□□ -1.63
PDX3	YBR035C	ARP5	P53946	755 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	REX2	P54964	269 aa	Known RBP	4.88	□□□□□ -1.63
PDX3	YBR035C	FDC1	Q03034	503 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	SNZ1	Q03148	297 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	AIM32	Q04689	311 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	PEX19	Q07418	342 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	TGL5	Q12043	749 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	VCX1	Q99385	411 aa		4.88	□□□□□ -1.63
PDX3	YBR035C	STF1	P01098	86 aa		4.87	□□□□□ -1.63
PDX3	YBR035C	AI1	P03875	834 aa		4.87	□□□□□ -1.63
PDX3	YBR035C	CPA2	P03965	1118 aa	Known RBP	4.87	□□□□□ -1.63
PDX3	YBR035C	HIS5	P07172	385 aa		4.87	□□□□□ -1.63
PDX3	YBR035C	PCT1	P13259	424 aa		4.87	□□□□□ -1.63
PDX3	YBR035C	GLK1	P17709	500 aa	Known RBP	4.87	□□□□□ -1.63
PDX3	YBR035C	PEX1	P24004	1043 aa		4.87	□□□□□ -1.63
PDX3	YBR035C	DAL80	P26343	269 aa		4.87	□□□□□ -1.63
PDX3	YBR035C	GCS1	P35197	352 aa		4.87	□□□□□ -1.63
PDX3	YBR035C	SRO77	P38163	1010 aa		4.87	□□□□□ -1.63
PDX3	YBR035C	REG2	P38232	338 aa		4.87	□□□□□ -1.63
PDX3	YBR035C	PHO88	P38264	188 aa	Predicted RBP	4.87	□□□□□ -1.63
PDX3	YBR035C	COS111	P38308	924 aa		4.87	□□□□□ -1.63
PDX3	YBR035C	RPP1	P38786	293 aa		4.87	□□□□□ -1.63
PDX3	YBR035C	VPS45	P38932	577 aa		4.87	□□□□□ -1.63
PDX3	YBR035C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
PDX3	YBR035C	YJL193W	P39542	402 aa		4.87	□□□□□ -1.63
PDX3	YBR035C	SEC28	P40509	296 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms