RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C ATG16Q03818 150 aa2.56□□□□□ -2
SPC72YAL047C CAC2Q04199 468 aa2.56□□□□□ -2
SPC72YAL047C YLR455WQ06188 304 aa2.56□□□□□ -2
SPC72YAL047C RRP6Q12149 733 aaKnown RBP2.56□□□□□ -2
SPC72YAL047C TY1B-DR3Q99231 1755 aa2.55□□□□□ -2
SPC72YAL047C PDR12Q02785 1511 aa2.55□□□□□ -2
SPC72YAL047C YER145C-AA0A023PYF4 145 aa2.55□□□□□ -2
SPC72YAL047C YML003WP0CF16 290 aa2.55□□□□□ -2
SPC72YAL047C PCT1P13259 424 aa2.55□□□□□ -2
SPC72YAL047C YHL041WP38730 149 aa2.55□□□□□ -2
SPC72YAL047C MRX1P40050 688 aa2.55□□□□□ -2
SPC72YAL047C PSF2P40359 213 aa2.55□□□□□ -2
SPC72YAL047C EAF7P53911 425 aaKnown RBP2.55□□□□□ -2
SPC72YAL047C UTP21Q06078 939 aaPredicted RBP2.55□□□□□ -2
SPC72YAL047C MCP2Q06567 569 aa2.55□□□□□ -2
SPC72YAL047C GPN2Q08726 347 aaPredicted RBP2.55□□□□□ -2
SPC72YAL047C YOR111WQ99210 232 aa2.55□□□□□ -2
SPC72YAL047C ARO1P08566 1588 aaKnown RBP2.55□□□□□ -2
SPC72YAL047C YOR1P53049 1477 aa2.55□□□□□ -2
SPC72YAL047C RAD16P31244 790 aa2.54□□□□□ -2
SPC72YAL047C RGT1P32862 1170 aa2.54□□□□□ -2
SPC72YAL047C UBP13P38187 747 aa2.54□□□□□ -2
SPC72YAL047C RTT107P38850 1070 aa2.54□□□□□ -2
SPC72YAL047C IES5P40060 125 aa2.54□□□□□ -2
SPC72YAL047C UBX4P54730 416 aa2.54□□□□□ -2
SPC72YAL047C FCP1Q03254 732 aa2.54□□□□□ -2
SPC72YAL047C FMP42Q04991 504 aa2.54□□□□□ -2
SPC72YAL047C VAM6Q07468 1049 aa2.54□□□□□ -2
SPC72YAL047C YDL121CQ07541 149 aa2.54□□□□□ -2
SPC72YAL047C NRT1Q08485 598 aa2.54□□□□□ -2
SPC72YAL047C TY1B-JR2P47100 1755 aaKnown RBP2.54□□□□□ -2
SPC72YAL047C TY1B-ER2Q03619 1755 aa2.54□□□□□ -2
SPC72YAL047C TY1B-MR1Q04214 1755 aa2.54□□□□□ -2
SPC72YAL047C TY1B-MR2Q04670 1755 aaKnown RBP2.54□□□□□ -2
SPC72YAL047C TY1B-LR1Q12088 1755 aaKnown RBP2.54□□□□□ -2
SPC72YAL047C TY1B-NL1Q12112 1755 aa2.54□□□□□ -2
SPC72YAL047C TY1B-GR1Q12141 1755 aa2.54□□□□□ -2
SPC72YAL047C TY1B-BLQ12490 1755 aa2.54□□□□□ -2
SPC72YAL047C POL1P13382 1468 aa2.54□□□□□ -2
SPC72YAL047C TPK1P06244 397 aa2.54□□□□□ -2
SPC72YAL047C CBP1P07252 654 aa2.54□□□□□ -2
SPC72YAL047C PGI1P12709 554 aaKnown RBP2.54□□□□□ -2
SPC72YAL047C SOF1P33750 489 aaKnown RBP2.54□□□□□ -2
SPC72YAL047C ASE1P50275 885 aa2.54□□□□□ -2
SPC72YAL047C PSP1P50896 841 aaKnown RBP2.54□□□□□ -2
SPC72YAL047C YNL181WP53878 407 aa2.54□□□□□ -2
SPC72YAL047C VMS1Q04311 632 aaKnown RBP2.54□□□□□ -2
SPC72YAL047C CRN1Q06440 651 aa2.54□□□□□ -2
SPC72YAL047C NDD1Q08887 554 aa2.54□□□□□ -2
SPC72YAL047C TY3B-GQ99315 1547 aa2.53□□□□□ -2
SPC72YAL047C YFL068WP0CX99 160 aa2.53□□□□□ -2
SPC72YAL047C YLL066W-AP0CY00 160 aa2.53□□□□□ -2
SPC72YAL047C YLL067W-AP0CY01 160 aa2.53□□□□□ -2
SPC72YAL047C APA1P16550 321 aaKnown RBP2.53□□□□□ -2
SPC72YAL047C YSP3P25036 478 aa2.53□□□□□ -2
SPC72YAL047C STV1P37296 890 aa2.53□□□□□ -2
SPC72YAL047C NPR3P38742 1146 aa2.53□□□□□ -2
SPC72YAL047C BZZ1P38822 633 aa2.53□□□□□ -2
SPC72YAL047C CCT4P39078 528 aaKnown RBP2.53□□□□□ -2
SPC72YAL047C YGL260WP53056 76 aa2.53□□□□□ -2
SPC72YAL047C YGR021WP53212 290 aa2.53□□□□□ -2
SPC72YAL047C ARP9Q05123 467 aa2.53□□□□□ -2
SPC72YAL047C COX17Q12287 69 aa2.53□□□□□ -2
SPC72YAL047C NUC1P08466 329 aa2.52□□□□□ -2.01
SPC72YAL047C RAP1P11938 827 aa2.52□□□□□ -2.01
SPC72YAL047C GUK1P15454 187 aaKnown RBP2.52□□□□□ -2.01
SPC72YAL047C TFC3P34111 1160 aa2.52□□□□□ -2.01
SPC72YAL047C EXO84P38261 753 aa2.52□□□□□ -2.01
SPC72YAL047C IML2P47031 731 aa2.52□□□□□ -2.01
SPC72YAL047C ESBP6P53918 673 aa2.52□□□□□ -2.01
SPC72YAL047C MAK10Q02197 733 aa2.52□□□□□ -2.01
SPC72YAL047C SVL3Q03088 825 aaKnown RBP2.52□□□□□ -2.01
SPC72YAL047C YDR415CQ04033 374 aaPredicted RBP2.52□□□□□ -2.01
SPC72YAL047C TAH18Q12181 623 aa2.52□□□□□ -2.01
SPC72YAL047C CHC1P22137 1653 aaKnown RBP2.52□□□□□ -2.01
SPC72YAL047C SNQ2P32568 1501 aaKnown RBP2.52□□□□□ -2.01
SPC72YAL047C MSM1P22438 575 aa2.52□□□□□ -2.01
SPC72YAL047C PPZ1P26570 692 aa2.52□□□□□ -2.01
SPC72YAL047C CDC15P27636 974 aa2.52□□□□□ -2.01
SPC72YAL047C NTR2P36118 322 aaPredicted RBP2.52□□□□□ -2.01
SPC72YAL047C YAP3P38749 330 aa2.52□□□□□ -2.01
SPC72YAL047C NAB3P38996 802 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
SPC72YAL047C COG1P53079 417 aa2.52□□□□□ -2.01
SPC72YAL047C ERG27Q12452 347 aaKnown RBP2.52□□□□□ -2.01
SPC72YAL047C MLP2P40457 1679 aa2.51□□□□□ -2.01
SPC72YAL047C STH1P32597 1359 aa2.51□□□□□ -2.01
SPC72YAL047C PET111P08468 800 aa2.51□□□□□ -2.01
SPC72YAL047C STE50P25344 346 aa2.51□□□□□ -2.01
SPC72YAL047C YCL049CP25577 312 aa2.51□□□□□ -2.01
SPC72YAL047C MRS6P32864 603 aaKnown RBP2.51□□□□□ -2.01
SPC72YAL047C AAP1P37898 856 aaKnown RBP2.51□□□□□ -2.01
SPC72YAL047C RFC1P38630 861 aaKnown RBP2.51□□□□□ -2.01
SPC72YAL047C ACA1P39970 489 aa2.51□□□□□ -2.01
SPC72YAL047C CTK2P46962 323 aa2.51□□□□□ -2.01
SPC72YAL047C SGF73P53165 657 aa2.51□□□□□ -2.01
SPC72YAL047C ASI1P54074 624 aa2.51□□□□□ -2.01
SPC72YAL047C MRPL13Q02204 264 aa2.51□□□□□ -2.01
SPC72YAL047C CTL1Q03220 320 aaKnown RBP2.51□□□□□ -2.01
SPC72YAL047C ARP10Q04549 284 aa2.51□□□□□ -2.01
SPC72YAL047C YMR254CQ04838 102 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms