RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 BCL9O00512 1426 aa14□□□□□ -0.17
LITAF-221ENST00000622633 NEFHP12036 1026 aa14□□□□□ -0.17
LITAF-221ENST00000622633 PTPREP23469 700 aa14□□□□□ -0.17
LITAF-221ENST00000622633 IL6STP40189 918 aaPredicted RBP14□□□□□ -0.17
LITAF-221ENST00000622633 ATP2B2Q01814 1243 aa14□□□□□ -0.17
LITAF-221ENST00000622633 PDCD2Q16342 344 aaPredicted RBP14□□□□□ -0.17
LITAF-221ENST00000622633 TMEM132AQ24JP5 1023 aa14□□□□□ -0.17
LITAF-221ENST00000622633 TSHZ1Q6ZSZ6 1077 aa14□□□□□ -0.17
LITAF-221ENST00000622633 CRACR2BQ8N4Y2 399 aaPredicted RBP14□□□□□ -0.17
LITAF-221ENST00000622633 OXER1Q8TDS5 423 aa14□□□□□ -0.17
LITAF-221ENST00000622633 ZBTB10Q96DT7 871 aa14□□□□□ -0.17
LITAF-221ENST00000622633 NACAP1Q9BZK3 213 aa14□□□□□ -0.17
LITAF-221ENST00000622633 DNAI1Q9UI46 699 aa14□□□□□ -0.17
LITAF-221ENST00000622633 MAGEA8P43361 318 aa14□□□□□ -0.17
LITAF-221ENST00000622633 RAB27AP51159 221 aa14□□□□□ -0.17
LITAF-221ENST00000622633 FMR1Q06787 632 aaKnown RBP eCLIP14□□□□□ -0.17
LITAF-221ENST00000622633 POSTNQ15063 836 aa14□□□□□ -0.17
LITAF-221ENST00000622633 ZNF827Q17R98 1081 aa14□□□□□ -0.17
LITAF-221ENST00000622633 RPUSD2Q8IZ73 545 aaKnown RBP14□□□□□ -0.17
LITAF-221ENST00000622633 PDILTQ8N807 584 aa14□□□□□ -0.17
LITAF-221ENST00000622633 IRX2Q9BZI1 471 aaPredicted RBP14□□□□□ -0.17
LITAF-221ENST00000622633 LRP2BPQ9P2M1 347 aa14□□□□□ -0.17
LITAF-221ENST00000622633 PCDHGA4Q9Y5G9 962 aa14□□□□□ -0.17
LITAF-221ENST00000622633 FANCGO15287 622 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 ETF1P62495 437 aaKnown RBP13.99□□□□□ -0.17
LITAF-221ENST00000622633 SKIDA1Q1XH10 827 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 RINLQ6ZS11 566 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 USP49Q70CQ1 688 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 TMTC2Q8N394 836 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 IQSEC3Q9UPP2 1182 aaPredicted RBP13.99□□□□□ -0.17
LITAF-221ENST00000622633 A0A0G2JS52 829 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 ERICH2A1L162 156 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 FRMD3A2A2Y4 597 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 MINDY4BA8MYZ0 360 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 SMIM22K7EJ46 135 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 TUBB4AP04350 444 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 PYGLP06737 847 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 FNTAP49354 379 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 MCM6Q14566 821 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 RILPL1Q5EBL4 403 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 TRMT44Q8IYL2 757 aaKnown RBP13.99□□□□□ -0.17
LITAF-221ENST00000622633 FANCBQ8NB91 859 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 C3orf20Q8ND61 904 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 FOXP1Q9H334 677 aaPredicted RBP13.99□□□□□ -0.17
LITAF-221ENST00000622633 CABP5Q9NP86 173 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 LMCD1Q9NZU5 365 aa13.99□□□□□ -0.17
LITAF-221ENST00000622633 HOOK1Q9UJC3 728 aaKnown RBP13.99□□□□□ -0.17
LITAF-221ENST00000622633 PHLPP2Q6ZVD8 1323 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 XIRP1Q702N8 1843 aaKnown RBP13.98□□□□□ -0.17
LITAF-221ENST00000622633 A0A1B0GUA9 196 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 DEXIO95424 95 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 GNAT2P19087 354 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 CLNS1AP54105 237 aaKnown RBP13.98□□□□□ -0.17
LITAF-221ENST00000622633 CDCA2Q69YH5 1023 aaPredicted RBP13.98□□□□□ -0.17
LITAF-221ENST00000622633 TRIM65Q6PJ69 517 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 RSRC2Q7L4I2 434 aaKnown RBP13.98□□□□□ -0.17
LITAF-221ENST00000622633 ZNF654Q8IZM8 581 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 MSL3Q8N5Y2 521 aaKnown RBP13.98□□□□□ -0.17
LITAF-221ENST00000622633 LRP6O75581 1613 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 CCDC151A5D8V7 595 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 MYO1FO00160 1098 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 CYP7A1P22680 504 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 INPP5BP32019 993 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 KIRREL3Q8IZU9 778 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 SDR42E1Q8WUS8 393 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 CHCHD3Q9NX63 227 aaKnown RBP13.98□□□□□ -0.17
LITAF-221ENST00000622633 NFE2L3Q9Y4A8 694 aa13.98□□□□□ -0.17
LITAF-221ENST00000622633 SLIT2O94813 1529 aa13.97□□□□□ -0.17
LITAF-221ENST00000622633 CCP110O43303 1012 aa13.97□□□□□ -0.17
LITAF-221ENST00000622633 PPARAQ07869 468 aa13.97□□□□□ -0.17
LITAF-221ENST00000622633 ADGRA1Q86SQ6 560 aa13.97□□□□□ -0.17
LITAF-221ENST00000622633 ARHGEF1Q92888 912 aaKnown RBP13.97□□□□□ -0.17
LITAF-221ENST00000622633 CCDC97Q96F63 343 aaPredicted RBP13.97□□□□□ -0.17
LITAF-221ENST00000622633 PNPLA7Q6ZV29 1317 aa13.97□□□□□ -0.17
LITAF-221ENST00000622633 ZNF335Q9H4Z2 1342 aaPredicted RBP13.97□□□□□ -0.17
LITAF-221ENST00000622633 hCG_1642624A0A1W2PR95 340 aa13.97□□□□□ -0.17
LITAF-221ENST00000622633 FAM205CA6NFA0 338 aa13.97□□□□□ -0.17
LITAF-221ENST00000622633 MYO1BO43795 1136 aa13.97□□□□□ -0.17
LITAF-221ENST00000622633 URI1O94763 535 aaPredicted RBP13.97□□□□□ -0.17
LITAF-221ENST00000622633 SARSP49591 514 aaKnown RBP13.97□□□□□ -0.17
LITAF-221ENST00000622633 ELOA2Q8IYF1 753 aaPredicted RBP13.97□□□□□ -0.17
LITAF-221ENST00000622633 FAM177A1Q8N128 213 aaPredicted RBP13.97□□□□□ -0.17
LITAF-221ENST00000622633 MKL1Q969V6 931 aa13.97□□□□□ -0.17
LITAF-221ENST00000622633 UBAC1Q9BSL1 405 aa13.97□□□□□ -0.17
LITAF-221ENST00000622633 CSRNP2Q9H175 543 aa13.97□□□□□ -0.17
LITAF-221ENST00000622633 SRPRBQ9Y5M8 271 aaKnown RBP13.97□□□□□ -0.17
LITAF-221ENST00000622633 PARP3Q9Y6F1 533 aa13.97□□□□□ -0.17
LITAF-221ENST00000622633 CAPN7Q9Y6W3 813 aa13.97□□□□□ -0.17
LITAF-221ENST00000622633 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.96□□□□□ -0.17
LITAF-221ENST00000622633 MYH3P11055 1940 aa13.96□□□□□ -0.17
LITAF-221ENST00000622633 IGHMBP2P38935 993 aaKnown RBP13.96□□□□□ -0.17
LITAF-221ENST00000622633 PRPHP41219 470 aa13.96□□□□□ -0.17
LITAF-221ENST00000622633 ADKP55263 362 aaKnown RBP13.96□□□□□ -0.17
LITAF-221ENST00000622633 MORC3Q14149 939 aa13.96□□□□□ -0.17
LITAF-221ENST00000622633 BEND6Q5SZJ8 279 aaPredicted RBP13.96□□□□□ -0.17
LITAF-221ENST00000622633 INTS5Q6P9B9 1019 aaKnown RBP13.96□□□□□ -0.17
LITAF-221ENST00000622633 NCAPG2Q86XI2 1143 aa13.96□□□□□ -0.17
LITAF-221ENST00000622633 TMEM139Q8IV31 216 aa13.96□□□□□ -0.17
LITAF-221ENST00000622633 MLKLQ8NB16 471 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms