RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 ADCY9O60503 1353 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 CCDC170Q8IYT3 715 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 DHTKD1Q96HY7 919 aaPredicted RBP11.83□□□□□ -0.52
SEC22B-201ENST00000578049 DDAH1O94760 285 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 ARL1P40616 181 aaPredicted RBP11.83□□□□□ -0.52
SEC22B-201ENST00000578049 UAP1Q16222 522 aaPredicted RBP11.83□□□□□ -0.52
SEC22B-201ENST00000578049 AP1ARQ63HQ0 302 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 CCDC197Q8NCU1 140 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 SPZ1Q9BXG8 430 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 ZNF608Q9ULD9 1512 aaPredicted RBP11.83□□□□□ -0.52
SEC22B-201ENST00000578049 COPB1P53618 953 aaKnown RBP11.83□□□□□ -0.52
SEC22B-201ENST00000578049 PPP1R2P3Q6NXS1 205 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 CLEC17AQ6ZS10 378 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 TRMT1LQ7Z2T5 733 aaKnown RBP11.83□□□□□ -0.52
SEC22B-201ENST00000578049 CACTINQ8WUQ7 758 aaKnown RBP11.83□□□□□ -0.52
SEC22B-201ENST00000578049 PCDHB13Q9Y5F0 798 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 SOS2Q07890 1332 aaPredicted RBP11.83□□□□□ -0.52
SEC22B-201ENST00000578049 PICALMQ13492 652 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 FANCBQ8NB91 859 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 HELBQ8NG08 1087 aaPredicted RBP11.83□□□□□ -0.52
SEC22B-201ENST00000578049 DESI2Q9BSY9 194 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 TMOD4Q9NZQ9 345 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 THEGQ9P2T0 379 aa11.83□□□□□ -0.52
SEC22B-201ENST00000578049 LMNB2Q03252 620 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 C19orf44Q9H6X5 657 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 SLC52A2Q9HAB3 445 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 LIG3P49916 1009 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 RBBP5Q15291 538 aaKnown RBP11.82□□□□□ -0.52
SEC22B-201ENST00000578049 UBE3CQ15386 1083 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 BLIDQ8IZY5 108 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 SPATA5Q8NB90 893 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 AK8Q96MA6 479 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 RIPOR2Q9Y4F9 1068 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 PCDHA5Q9Y5H7 936 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 GCC2Q8IWJ2 1684 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 ARHGAP31Q2M1Z3 1444 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 PASKQ96RG2 1323 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 DCUN1D2Q6PH85 259 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 TEKT1Q969V4 418 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 KDM5AP29375 1690 aaKnown RBP11.82□□□□□ -0.52
SEC22B-201ENST00000578049 ZNF532Q9HCE3 1301 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 KCNK3O14649 394 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 KIFC2Q96AC6 838 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 LRRC59Q96AG4 307 aaKnown RBP11.82□□□□□ -0.52
SEC22B-201ENST00000578049 PANX2Q96RD6 677 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 TUBB6Q9BUF5 446 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 MIS12Q9H081 205 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 H0YCG3 227 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 HSPD1P10809 573 aaKnown RBP11.82□□□□□ -0.52
SEC22B-201ENST00000578049 PTH1RQ03431 593 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 EMBQ6PCB8 327 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 CDAN1Q8IWY9 1227 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 CCT6BQ92526 530 aa11.82□□□□□ -0.52
SEC22B-201ENST00000578049 SPATS2LQ9NUQ6 558 aaKnown RBP11.82□□□□□ -0.52
SEC22B-201ENST00000578049 A0A0D9SFI3 127 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 LRRD1A4D1F6 860 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 PKP1Q13835 747 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 TBC1D22AQ8WUA7 517 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 EAF2Q96CJ1 260 aaPredicted RBP11.81□□□□□ -0.52
SEC22B-201ENST00000578049 ASXL2Q76L83 1435 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 NEURL1BA8MQ27 555 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 SEMA3EO15041 775 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 PDIA3P30101 505 aaKnown RBP11.81□□□□□ -0.52
SEC22B-201ENST00000578049 NDUFA8P51970 172 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 RNASE9P60153 205 aaKnown RBP11.81□□□□□ -0.52
SEC22B-201ENST00000578049 WHAMMQ8TF30 809 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 ARHGEF10LQ9HCE6 1279 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 PNMA2Q9UL42 364 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 KCNJ14Q9UNX9 436 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 EIF3BP55884 814 aaKnown RBP11.81□□□□□ -0.52
SEC22B-201ENST00000578049 STRN3Q13033 797 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 C10orf76Q5T2E6 689 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 RNF26Q9BY78 433 aaPredicted RBP11.81□□□□□ -0.52
SEC22B-201ENST00000578049 MED23Q9ULK4 1368 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 BACH1O14867 736 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 TAF5LO75529 589 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 CCHCR1Q8TD31 782 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 STAG1Q8WVM7 1258 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 PDLIM2Q96JY6 352 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 SLC4A8Q2Y0W8 1093 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 RABGAP1Q9Y3P9 1069 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 GIPC1O14908 333 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 DDB1Q16531 1140 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 TRIM42Q8IWZ5 723 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 NLRC4Q9NPP4 1024 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 PPP1R1BQ9UD71 204 aaPredicted RBP11.81□□□□□ -0.52
SEC22B-201ENST00000578049 TACC3Q9Y6A5 838 aa11.81□□□□□ -0.52
SEC22B-201ENST00000578049 MYOM2P54296 1465 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 OR52Z1P0C646 297 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 CCT5P48643 541 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 VSTM4Q8IW00 320 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 FAM89AQ96GI7 184 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 LSM14BQ9BX40 385 aaKnown RBP11.8□□□□□ -0.52
SEC22B-201ENST00000578049 JRKLQ9Y4A0 524 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 AOC3Q16853 763 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 GBP7Q8N8V2 638 aaPredicted RBP11.8□□□□□ -0.52
SEC22B-201ENST00000578049 SYNMO15061 1565 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 RPN1P04843 607 aaKnown RBP11.8□□□□□ -0.52
SEC22B-201ENST00000578049 PPARAQ07869 468 aa11.8□□□□□ -0.52
SEC22B-201ENST00000578049 TERF2Q15554 542 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms