RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 WDR43Q15061 677 aaKnown RBP eCLIP11.27□□□□□ -0.61
CFDP1-206ENST00000566254 PRAMEF18Q5VWM3 479 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 TMC4Q7Z404 712 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 CCDC155Q8N6L0 562 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 CFHR5Q9BXR6 569 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 BCL11AQ9H165 835 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 NUCKS1Q9H1E3 243 aaKnown RBP11.27□□□□□ -0.61
CFDP1-206ENST00000566254 R3HDMLQ9H3Y0 253 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 RNF19AQ9NV58 838 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 CUEDC1Q9NWM3 386 aaPredicted RBP11.27□□□□□ -0.61
CFDP1-206ENST00000566254 PARP2Q9UGN5 583 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 TSPYL4Q9UJ04 414 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 FOXD3Q9UJU5 478 aaPredicted RBP11.27□□□□□ -0.61
CFDP1-206ENST00000566254 LAS1LQ9Y4W2 734 aaKnown RBP11.27□□□□□ -0.61
CFDP1-206ENST00000566254 PCDHGC4Q9Y5F7 938 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 COL4A1P02462 1669 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 MKI67P46013 3256 aaKnown RBP11.26□□□□□ -0.61
CFDP1-206ENST00000566254 H7C1W4 665 aa11.26□□□□□ -0.61
CFDP1-206ENST00000566254 FKTNO75072 461 aa11.26□□□□□ -0.61
CFDP1-206ENST00000566254 CPNE3O75131 537 aaKnown RBP11.26□□□□□ -0.61
CFDP1-206ENST00000566254 AIMP1Q12904 312 aaKnown RBP11.26□□□□□ -0.61
CFDP1-206ENST00000566254 DBN1Q16643 649 aa11.26□□□□□ -0.61
CFDP1-206ENST00000566254 CCDC146Q8IYE0 955 aa11.26□□□□□ -0.61
CFDP1-206ENST00000566254 FBF1Q8TES7 1133 aa11.26□□□□□ -0.61
CFDP1-206ENST00000566254 PLEKHF1Q96S99 279 aa11.26□□□□□ -0.61
CFDP1-206ENST00000566254 TMEM63CQ9P1W3 806 aa11.26□□□□□ -0.61
CFDP1-206ENST00000566254 GMPR2Q9P2T1 348 aaKnown RBP11.26□□□□□ -0.61
CFDP1-206ENST00000566254 KCNH4Q9UQ05 1017 aa11.26□□□□□ -0.61
CFDP1-206ENST00000566254 TM4SF4P48230 202 aa11.25□□□□□ -0.61
CFDP1-206ENST00000566254 ZNF280AP59817 542 aaPredicted RBP11.25□□□□□ -0.61
CFDP1-206ENST00000566254 LMOD3Q0VAK6 560 aa11.25□□□□□ -0.61
CFDP1-206ENST00000566254 SFSWAPQ12872 951 aaKnown RBP11.25□□□□□ -0.61
CFDP1-206ENST00000566254 MRPL58Q14197 206 aaKnown RBP11.25□□□□□ -0.61
CFDP1-206ENST00000566254 HSP90AB3PQ58FF7 597 aa11.25□□□□□ -0.61
CFDP1-206ENST00000566254 COPS6Q7L5N1 327 aa11.25□□□□□ -0.61
CFDP1-206ENST00000566254 TRIM22Q8IYM9 498 aa11.25□□□□□ -0.61
CFDP1-206ENST00000566254 TBC1D16Q8TBP0 767 aa11.25□□□□□ -0.61
CFDP1-206ENST00000566254 SNX29Q8TEQ0 813 aa11.25□□□□□ -0.61
CFDP1-206ENST00000566254 XAGE3Q8WTP9 111 aa11.25□□□□□ -0.61
CFDP1-206ENST00000566254 EYA3Q99504 573 aa11.25□□□□□ -0.61
CFDP1-206ENST00000566254 SCN9AQ15858 1988 aa11.25□□□□□ -0.61
CFDP1-206ENST00000566254 TNP2Q05952 138 aa11.24□□□□□ -0.61
CFDP1-206ENST00000566254 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
CFDP1-206ENST00000566254 FAM161BQ96MY7 647 aa11.24□□□□□ -0.61
CFDP1-206ENST00000566254 MYOZ2Q9NPC6 264 aa11.24□□□□□ -0.61
CFDP1-206ENST00000566254 TRIM17Q9Y577 477 aa11.24□□□□□ -0.61
CFDP1-206ENST00000566254 DLG5Q8TDM6 1919 aa11.24□□□□□ -0.61
CFDP1-206ENST00000566254 MYBBP1AQ9BQG0 1328 aaKnown RBP11.24□□□□□ -0.61
CFDP1-206ENST00000566254 DCDC2BA2VCK2 349 aa11.23□□□□□ -0.61
CFDP1-206ENST00000566254 KHNYNO15037 678 aaKnown RBP11.23□□□□□ -0.61
CFDP1-206ENST00000566254 RECKO95980 971 aa11.23□□□□□ -0.61
CFDP1-206ENST00000566254 DAB2P98082 770 aa11.23□□□□□ -0.61
CFDP1-206ENST00000566254 SREBF2Q12772 1141 aa11.23□□□□□ -0.61
CFDP1-206ENST00000566254 AGBL3Q8NEM8 1001 aa11.23□□□□□ -0.61
CFDP1-206ENST00000566254 ZC3H12CQ9C0D7 883 aaKnown RBP11.23□□□□□ -0.61
CFDP1-206ENST00000566254 ZFYVE28Q9HCC9 887 aa11.23□□□□□ -0.61
CFDP1-206ENST00000566254 NDFIP2Q9NV92 336 aa11.23□□□□□ -0.61
CFDP1-206ENST00000566254 PITPNM2Q9BZ72 1349 aa11.23□□□□□ -0.61
CFDP1-206ENST00000566254 DDX60Q8IY21 1712 aaKnown RBP11.23□□□□□ -0.61
CFDP1-206ENST00000566254 BNIP3LO60238 219 aa11.22□□□□□ -0.61
CFDP1-206ENST00000566254 PHACTR2O75167 634 aa11.22□□□□□ -0.61
CFDP1-206ENST00000566254 UFL1O94874 794 aa11.22□□□□□ -0.61
CFDP1-206ENST00000566254 MAPTP10636 758 aaKnown RBP11.22□□□□□ -0.61
CFDP1-206ENST00000566254 EN2P19622 333 aaPredicted RBP11.22□□□□□ -0.61
CFDP1-206ENST00000566254 TMPOP42166 694 aaKnown RBP11.22□□□□□ -0.61
CFDP1-206ENST00000566254 SF3B3Q15393 1217 aaKnown RBP11.22□□□□□ -0.61
CFDP1-206ENST00000566254 OTOP1Q7RTM1 612 aa11.22□□□□□ -0.61
CFDP1-206ENST00000566254 FAM89AQ96GI7 184 aa11.22□□□□□ -0.61
CFDP1-206ENST00000566254 GMCL1Q96IK5 515 aa11.22□□□□□ -0.61
CFDP1-206ENST00000566254 HCN2Q9UL51 889 aa11.22□□□□□ -0.61
CFDP1-206ENST00000566254 HTTP42858 3142 aa11.22□□□□□ -0.61
CFDP1-206ENST00000566254 SNRPBP14678 240 aaKnown RBP11.21□□□□□ -0.61
CFDP1-206ENST00000566254 ITGA6P23229 1130 aa11.21□□□□□ -0.61
CFDP1-206ENST00000566254 PSMD2Q13200 908 aa11.21□□□□□ -0.61
CFDP1-206ENST00000566254 LAMC2Q13753 1193 aa11.21□□□□□ -0.61
CFDP1-206ENST00000566254 PRKG1Q13976 671 aa11.21□□□□□ -0.61
CFDP1-206ENST00000566254 NBPF9Q3BBW0 867 aa11.21□□□□□ -0.61
CFDP1-206ENST00000566254 INTS3Q68E01 1043 aaKnown RBP11.21□□□□□ -0.61
CFDP1-206ENST00000566254 ZNF837Q96EG3 531 aaPredicted RBP11.21□□□□□ -0.61
CFDP1-206ENST00000566254 GMLQ99445 158 aa11.21□□□□□ -0.61
CFDP1-206ENST00000566254 GSX2Q9BZM3 304 aa11.21□□□□□ -0.61
CFDP1-206ENST00000566254 ABI2Q9NYB9 513 aaPredicted RBP11.21□□□□□ -0.61
CFDP1-206ENST00000566254 CNTN3Q9P232 1028 aa11.21□□□□□ -0.61
CFDP1-206ENST00000566254 ZNF609O15014 1411 aa11.2□□□□□ -0.62
CFDP1-206ENST00000566254 SASH3O75995 380 aa11.2□□□□□ -0.62
CFDP1-206ENST00000566254 GNA15P30679 374 aa11.2□□□□□ -0.62
CFDP1-206ENST00000566254 RPS8P62241 208 aaKnown RBP11.2□□□□□ -0.62
CFDP1-206ENST00000566254 PTPN12Q05209 780 aaKnown RBP11.2□□□□□ -0.62
CFDP1-206ENST00000566254 CCINQ13939 588 aa11.2□□□□□ -0.62
CFDP1-206ENST00000566254 RUNDC1Q96C34 613 aa11.2□□□□□ -0.62
CFDP1-206ENST00000566254 CHRDQ9H2X0 955 aa11.2□□□□□ -0.62
CFDP1-206ENST00000566254 NF2P35240 595 aa11.19□□□□□ -0.62
CFDP1-206ENST00000566254 TSNAXIP1Q2TAA8 658 aa11.19□□□□□ -0.62
CFDP1-206ENST00000566254 C1orf127Q8N9H9 656 aa11.19□□□□□ -0.62
CFDP1-206ENST00000566254 CCDC74AQ96AQ1 378 aa11.19□□□□□ -0.62
CFDP1-206ENST00000566254 BACH2Q9BYV9 841 aa11.19□□□□□ -0.62
CFDP1-206ENST00000566254 SEC31BQ9NQW1 1179 aa11.19□□□□□ -0.62
CFDP1-206ENST00000566254 GGA1Q9UJY5 639 aa11.19□□□□□ -0.62
CFDP1-206ENST00000566254 FZD1Q9UP38 647 aa11.19□□□□□ -0.62
CFDP1-206ENST00000566254 IRS4O14654 1257 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms