RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 NRBF2Q96F24 287 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 ANKRD27Q96NW4 1050 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 SMC6Q96SB8 1091 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 CCT7Q99832 543 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 SEMA4AQ9H3S1 761 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 ZWILCHQ9H900 591 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 PARVBQ9HBI1 364 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 ATP11BQ9Y2G3 1177 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 AXIN2Q9Y2T1 843 aa5.74□□□□□ -1.49
UBE4A-203ENST00000545354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.74□□□□□ -1.49
UBE4A-203ENST00000545354 TMEM94Q12767 1356 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 ARPC4-TTLL3A0A0A6YYG9 625 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 EME2A4GXA9 379 aaPredicted RBP5.73□□□□□ -1.49
UBE4A-203ENST00000545354 M0R2C6 588 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 RNF8O76064 485 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 CAVIN2O95810 425 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 EIF2S1P05198 315 aaKnown RBP5.73□□□□□ -1.49
UBE4A-203ENST00000545354 KRT13P13646 458 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 GYS1P13807 737 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 ATP5JP18859 108 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 ENDOUP21128 410 aaKnown RBP5.73□□□□□ -1.49
UBE4A-203ENST00000545354 MCM2P49736 904 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 NLRP12P59046 1061 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 LSM11P83369 360 aaKnown RBP eCLIP5.73□□□□□ -1.49
UBE4A-203ENST00000545354 SKOR1P84550 965 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 TRAP1Q12931 704 aaKnown RBP5.73□□□□□ -1.49
UBE4A-203ENST00000545354 USP4Q13107 963 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 MMRN1Q13201 1228 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 PROSER3Q2NL68 480 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 ARMC4Q5T2S8 1044 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 PCNX4Q63HM2 1172 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.73□□□□□ -1.49
UBE4A-203ENST00000545354 LINC00469Q8N7U9 141 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 ZNF454Q8N9F8 522 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 SYT2Q8N9I0 419 aaPredicted RBP5.73□□□□□ -1.49
UBE4A-203ENST00000545354 TBC1D20Q96BZ9 403 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 HVCN1Q96D96 273 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 SNX27Q96L92 541 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.73□□□□□ -1.49
UBE4A-203ENST00000545354 VCPKMTQ9H867 229 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 LGR6Q9HBX8 967 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 RIC8AQ9NPQ8 531 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 CCPG1Q9ULG6 757 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 PHF24Q9UPV7 400 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 ZNF711Q9Y462 761 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 PCDHB2Q9Y5E7 798 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 PCDHGC5Q9Y5F6 944 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 TSPOAP1O95153 1857 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 PPIP5K1Q6PFW1 1433 aa5.73□□□□□ -1.49
UBE4A-203ENST00000545354 PRG4Q92954 1404 aaPredicted RBP5.73□□□□□ -1.49
UBE4A-203ENST00000545354 CARMIL1Q5VZK9 1371 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 PLEKHH1Q9ULM0 1364 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 IDH3BO43837 385 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 ZNF254O75437 659 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 SFTPCP11686 197 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 CDK17Q00537 523 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 MOGSQ13724 837 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 SAFBQ15424 915 aaKnown RBP eCLIP5.72□□□□□ -1.49
UBE4A-203ENST00000545354 KMT5BQ4FZB7 885 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 ARMC3Q5W041 872 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 MAATS1Q7Z4T9 603 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 LILRB1Q8NHL6 650 aaPredicted RBP5.72□□□□□ -1.49
UBE4A-203ENST00000545354 GDAP1Q8TB36 358 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 DPF3Q92784 378 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 HPS3Q969F9 1004 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 JPH4Q96JJ6 628 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 RPGRIP1Q96KN7 1286 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 TSC22D3Q99576 134 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 PARD6BQ9BYG5 372 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 TBC1D2Q9BYX2 928 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 CLK4Q9HAZ1 481 aaKnown RBP5.72□□□□□ -1.49
UBE4A-203ENST00000545354 STAP2Q9UGK3 403 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 FBXL5Q9UKA1 691 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 GIT1Q9Y2X7 761 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 MTUS2Q5JR59 1369 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 CLRN2A0PK11 232 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 NMT2O60551 498 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 MYL3P08590 195 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 CNGA1P29973 690 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 AMPHP49418 695 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 OXCT1P55809 520 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 AMPD3Q01432 767 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 RUNX1T1Q06455 604 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 LRRC74AQ0VAA2 488 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 PDE1CQ14123 709 aaPredicted RBP5.72□□□□□ -1.49
UBE4A-203ENST00000545354 SIM2Q14190 667 aaPredicted RBP5.72□□□□□ -1.49
UBE4A-203ENST00000545354 BTG3Q14201 252 aaPredicted RBP5.72□□□□□ -1.49
UBE4A-203ENST00000545354 TNNI3KQ59H18 835 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 C8orf74Q6P047 294 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 TUBA3EQ6PEY2 450 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 ZNF804AQ7Z570 1209 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 LUZP1Q86V48 1076 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 LILRB2Q8N423 598 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 SMC1BQ8NDV3 1235 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 EXOC6Q8TAG9 804 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 LMBR1Q8WVP7 490 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 ZKSCAN4Q969J2 545 aaPredicted RBP5.72□□□□□ -1.49
UBE4A-203ENST00000545354 TBATAQ96M53 351 aa5.72□□□□□ -1.49
UBE4A-203ENST00000545354 C16orf45Q96MC5 204 aaPredicted RBP5.72□□□□□ -1.49
UBE4A-203ENST00000545354 IER2Q9BTL4 223 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms