RNA–Protein interactions for RNA: ENST00000542815.7

ZEB1-208, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-208ENST00000542815 RIOK1Q9BRS2 568 aaKnown RBP6.04□□□□□ -1.44
ZEB1-208ENST00000542815 UPF3AQ9H1J1 476 aaKnown RBP6.04□□□□□ -1.44
ZEB1-208ENST00000542815 PHF24Q9UPV7 400 aa6.04□□□□□ -1.44
ZEB1-208ENST00000542815 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.04□□□□□ -1.44
ZEB1-208ENST00000542815 ZHX2Q9Y6X8 837 aa6.04□□□□□ -1.44
ZEB1-208ENST00000542815 PDE4DIPQ5VU43 2346 aa6.04□□□□□ -1.44
ZEB1-208ENST00000542815 USP17L15C9J2P7 530 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 USP17L13C9JLJ4 530 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 USP17L11C9JVI0 530 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 USP17L18D6R9N7 530 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 USP17L22D6RA61 530 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 USP17L17D6RBQ6 530 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 USP17L19D6RCP7 530 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 USP17L20D6RJB6 530 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 PLA2G6O60733 806 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 PTPREP23469 700 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 USP17L24Q0WX57 530 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 TFCP2Q12800 502 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 CHAF1AQ13111 956 aaPredicted RBP6.03□□□□□ -1.44
ZEB1-208ENST00000542815 MAP2K5Q13163 448 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 PRKG1Q13976 671 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 PPP4R3BQ5MIZ7 849 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 RASIP1Q5U651 963 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 GIMAP6Q6P9H5 292 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.03□□□□□ -1.44
ZEB1-208ENST00000542815 DZIP1Q86YF9 867 aaKnown RBP6.03□□□□□ -1.44
ZEB1-208ENST00000542815 MAGEB6Q8N7X4 407 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 GPRC5AQ8NFJ5 357 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 TRIB2Q92519 343 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 LPAR1Q92633 364 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 GPATCH3Q96I76 525 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 NBPF3Q9H094 633 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.03□□□□□ -1.44
ZEB1-208ENST00000542815 HMX1Q9NP08 348 aaPredicted RBP6.03□□□□□ -1.44
ZEB1-208ENST00000542815 GEMIN8Q9NWZ8 242 aaKnown RBP6.03□□□□□ -1.44
ZEB1-208ENST00000542815 RAD50Q92878 1312 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 SALL3Q9BXA9 1300 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 GUCY1A2P33402 732 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 HSPA4P34932 840 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 PSEN1P49768 467 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 HERVK_113P62684 666 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 ERVK-9P63128 1117 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 ERVK-24P63145 666 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 FOXD4L6Q3SYB3 417 aaPredicted RBP6.03□□□□□ -1.44
ZEB1-208ENST00000542815 FOXD4L3Q6VB84 417 aaPredicted RBP6.03□□□□□ -1.44
ZEB1-208ENST00000542815 DIAPH3Q9NSV4 1193 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 EMILIN3Q9NT22 766 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 PALD1Q9ULE6 856 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 KIAA1217Q5T5P2 1943 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 PCNTO95613 3336 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 TNPO2O14787 897 aaKnown RBP6.03□□□□□ -1.44
ZEB1-208ENST00000542815 GLRX3O76003 335 aaKnown RBP6.03□□□□□ -1.44
ZEB1-208ENST00000542815 FMNL1O95466 1100 aaPredicted RBP6.03□□□□□ -1.44
ZEB1-208ENST00000542815 MCM5P33992 734 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 CACNB3P54284 484 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 SETQ01105 290 aaPredicted RBP6.03□□□□□ -1.44
ZEB1-208ENST00000542815 TTF1Q15361 905 aaPredicted RBP6.03□□□□□ -1.44
ZEB1-208ENST00000542815 PLEKHH3Q7Z736 793 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 TDHQ8IZJ6 230 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 NUDT12Q9BQG2 462 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 TSPY26PQ9H489 355 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 TMEM63CQ9P1W3 806 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 CCDC39Q9UFE4 941 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 LIMCH1Q9UPQ0 1083 aa6.03□□□□□ -1.44
ZEB1-208ENST00000542815 SIP14410 1827 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 USP17L10C9JJH3 530 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 KIAA0355O15063 1070 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 IFIT2P09913 472 aaKnown RBP6.02□□□□□ -1.45
ZEB1-208ENST00000542815 CSPP1Q1MSJ5 1256 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 CWC27Q6UX04 472 aaKnown RBP6.02□□□□□ -1.45
ZEB1-208ENST00000542815 REPS2Q8NFH8 660 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 KLHDC4Q8TBB5 520 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 ZNF830Q96NB3 372 aaPredicted RBP6.02□□□□□ -1.45
ZEB1-208ENST00000542815 TSPYL1Q9H0U9 437 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 MROH8Q9H579 483 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 NOL7Q9UMY1 257 aaKnown RBP6.02□□□□□ -1.45
ZEB1-208ENST00000542815 SMC3Q9UQE7 1217 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 SYNGAP1Q96PV0 1343 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 IGKV6D-41A0A0C4DH26 115 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 SGSM2O43147 1006 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 OFD1O75665 1012 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 CYP2C8P10632 490 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 ZKSCAN1P17029 563 aaPredicted RBP6.02□□□□□ -1.45
ZEB1-208ENST00000542815 CCNA1P78396 465 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 SBK1Q52WX2 424 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 MAMDC4Q6UXC1 1216 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 GPR142Q7Z601 462 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 RNF214Q8ND24 703 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 SH3RF3Q8TEJ3 882 aaPredicted RBP6.02□□□□□ -1.45
ZEB1-208ENST00000542815 TOX2Q96NM4 488 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 RNF208Q9H0X6 261 aa6.02□□□□□ -1.45
ZEB1-208ENST00000542815 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.02□□□□□ -1.45
ZEB1-208ENST00000542815 TNNT1P13805 278 aa6.01□□□□□ -1.45
ZEB1-208ENST00000542815 POU3F3P20264 500 aaPredicted RBP6.01□□□□□ -1.45
ZEB1-208ENST00000542815 SHMT1P34896 483 aa6.01□□□□□ -1.45
ZEB1-208ENST00000542815 OAZ1P54368 228 aa6.01□□□□□ -1.45
ZEB1-208ENST00000542815 IRX3P78415 501 aaPredicted RBP6.01□□□□□ -1.45
ZEB1-208ENST00000542815 FAM43BQ6ZT52 329 aaPredicted RBP6.01□□□□□ -1.45
ZEB1-208ENST00000542815 FAM184AQ8NB25 1140 aa6.01□□□□□ -1.45
ZEB1-208ENST00000542815 MORC4Q8TE76 937 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms