RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 KIF4BQ2VIQ3 1234 aa12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 LRRFIP1Q32MZ4 808 aaKnown RBP12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 TSGA10IPQ3SY00 556 aa12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 CFAP100Q494V2 611 aa12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 TBC1D10BQ4KMP7 808 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 ZSCAN25Q6NSZ9 544 aa12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 HHIPL2Q6UWX4 724 aa12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 USP50Q70EL3 339 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 PNMA8AQ86V59 439 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 SKAP1Q86WV1 359 aa12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 RILPL2Q969X0 211 aa12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 FSD1Q9BTV5 496 aa12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 TAF1DQ9H5J8 278 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 TIMMDC1Q9NPL8 285 aa12.2□□□□□ -0.46
RAB11FIP3-211ENST00000495663 MROH7-TTC4A0A0A0MT08 1334 aa12.19□□□□□ -0.46
RAB11FIP3-211ENST00000495663 RNF225M0QZC1 329 aaPredicted RBP12.19□□□□□ -0.46
RAB11FIP3-211ENST00000495663 GDF11O95390 407 aa12.19□□□□□ -0.46
RAB11FIP3-211ENST00000495663 PHKA2P46019 1235 aa12.19□□□□□ -0.46
RAB11FIP3-211ENST00000495663 IRF5Q13568 498 aa12.19□□□□□ -0.46
RAB11FIP3-211ENST00000495663 SLC9C2Q5TAH2 1124 aa12.19□□□□□ -0.46
RAB11FIP3-211ENST00000495663 FOXR1Q6PIV2 292 aa12.19□□□□□ -0.46
RAB11FIP3-211ENST00000495663 TAS1R3Q7RTX0 852 aa12.19□□□□□ -0.46
RAB11FIP3-211ENST00000495663 TMEM151AQ8N4L1 468 aa12.19□□□□□ -0.46
RAB11FIP3-211ENST00000495663 MAGEB6Q8N7X4 407 aa12.19□□□□□ -0.46
RAB11FIP3-211ENST00000495663 ZDHHC15Q96MV8 337 aa12.19□□□□□ -0.46
RAB11FIP3-211ENST00000495663 GAKO14976 1311 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 SPATA31C2B4DYI2 1134 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 WNT10BO00744 389 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 MYO1BO43795 1136 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 STAU1O95793 577 aaKnown RBP12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 EGFRP00533 1210 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 GNRH1P01148 92 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 ZFYP08048 801 aaPredicted RBP12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 CELA2BP08218 269 aaPredicted RBP12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 GSPT1P15170 499 aaKnown RBP12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 PDE6AP16499 860 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 CYP7A1P22680 504 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 IRS1P35568 1242 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 ADD2P35612 726 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 MARSP56192 900 aaKnown RBP12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 MAP3K10Q02779 954 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 EAPPQ56P03 285 aaPredicted RBP12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 TICAM2Q86XR7 235 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 TRPM4Q8TD43 1214 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 ZNF384Q8TF68 577 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 NOL10Q9BSC4 688 aaKnown RBP12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 DAGLAQ9Y4D2 1042 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 CDK5RAP2Q96SN8 1893 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 POLR2AP24928 1970 aaKnown RBP12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 RFX7Q2KHR2 1363 aa12.18□□□□□ -0.46
RAB11FIP3-211ENST00000495663 ZNF532Q9HCE3 1301 aa12.17□□□□□ -0.46
RAB11FIP3-211ENST00000495663 FOCADQ5VW36 1801 aa12.17□□□□□ -0.46
RAB11FIP3-211ENST00000495663 CENPCQ03188 943 aa12.17□□□□□ -0.46
RAB11FIP3-211ENST00000495663 UBE3CQ15386 1083 aa12.17□□□□□ -0.46
RAB11FIP3-211ENST00000495663 GMCL1Q96IK5 515 aa12.17□□□□□ -0.46
RAB11FIP3-211ENST00000495663 ZBED3Q96IU2 234 aaPredicted RBP12.17□□□□□ -0.46
RAB11FIP3-211ENST00000495663 PRMT6Q96LA8 375 aaPredicted RBP12.17□□□□□ -0.46
RAB11FIP3-211ENST00000495663 ESYT1Q9BSJ8 1104 aa12.17□□□□□ -0.46
RAB11FIP3-211ENST00000495663 GPAMQ9HCL2 828 aa12.17□□□□□ -0.46
RAB11FIP3-211ENST00000495663 PCDHAC2Q9Y5I4 1007 aa12.17□□□□□ -0.46
RAB11FIP3-211ENST00000495663 GPR75-ASB3A0A0A6YYF3 556 aa12.16□□□□□ -0.46
RAB11FIP3-211ENST00000495663 TCRBV5S4A2TA0A5A2 114 aa12.16□□□□□ -0.46
RAB11FIP3-211ENST00000495663 RNF113AO15541 343 aaKnown RBP12.16□□□□□ -0.46
RAB11FIP3-211ENST00000495663 BAG3O95817 575 aa12.16□□□□□ -0.46
RAB11FIP3-211ENST00000495663 SDSP20132 328 aa12.16□□□□□ -0.46
RAB11FIP3-211ENST00000495663 BTDP43251 543 aa12.16□□□□□ -0.46
RAB11FIP3-211ENST00000495663 HIRAP54198 1017 aaPredicted RBP12.16□□□□□ -0.46
RAB11FIP3-211ENST00000495663 VAC14Q08AM6 782 aa12.16□□□□□ -0.46
RAB11FIP3-211ENST00000495663 NBPF9Q3BBW0 867 aa12.16□□□□□ -0.46
RAB11FIP3-211ENST00000495663 BMP2KLQ5H9B9 411 aa12.16□□□□□ -0.46
RAB11FIP3-211ENST00000495663 APOBEC3HQ6NTF7 200 aaKnown RBP12.16□□□□□ -0.46
RAB11FIP3-211ENST00000495663 CERS3Q8IU89 383 aa12.16□□□□□ -0.46
RAB11FIP3-211ENST00000495663 DOLKQ9UPQ8 538 aa12.16□□□□□ -0.46
RAB11FIP3-211ENST00000495663 HIP1O00291 1037 aa12.15□□□□□ -0.46
RAB11FIP3-211ENST00000495663 ADGRA1Q86SQ6 560 aa12.15□□□□□ -0.46
RAB11FIP3-211ENST00000495663 LDHDQ86WU2 507 aa12.15□□□□□ -0.46
RAB11FIP3-211ENST00000495663 APPBP2Q92624 585 aa12.15□□□□□ -0.46
RAB11FIP3-211ENST00000495663 TDRD3Q9H7E2 651 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-211ENST00000495663 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.46
RAB11FIP3-211ENST00000495663 AATFQ9NY61 560 aaKnown RBP eCLIP12.15□□□□□ -0.46
RAB11FIP3-211ENST00000495663 TMOD2Q9NZR1 351 aa12.15□□□□□ -0.46
RAB11FIP3-211ENST00000495663 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 CLRN2A0PK11 232 aa12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 CHGBP05060 677 aa12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 ABL2P42684 1182 aa12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 SLFNL1Q499Z3 407 aa12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 OXLD1Q5BKU9 147 aa12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 ANGEL2Q5VTE6 544 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 CDC42EP5Q6NZY7 148 aa12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 MIGA1Q8NAN2 632 aa12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 DCPSQ96C86 337 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 TRERF1Q96PN7 1200 aa12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 ZSCAN10Q96SZ4 725 aaPredicted RBP12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 NUCKS1Q9H1E3 243 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 PRM3Q9NNZ6 103 aa12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 USP40Q9NVE5 1235 aa12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 GGA3Q9NZ52 723 aa12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 ZNF70Q9UC06 446 aaPredicted RBP12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 PGAP2Q9UHJ9 254 aa12.14□□□□□ -0.47
RAB11FIP3-211ENST00000495663 NAV1Q8NEY1 1877 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms