RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 CCDC51Q96ER9 411 aa16.62■□□□□ 0.25
SMTN-219ENST00000493335 MED4Q9NPJ6 270 aa16.62■□□□□ 0.25
SMTN-219ENST00000493335 XDHP47989 1333 aa16.62■□□□□ 0.25
SMTN-219ENST00000493335 MYBL2P10244 700 aa16.62■□□□□ 0.25
SMTN-219ENST00000493335 LIG3P49916 1009 aa16.62■□□□□ 0.25
SMTN-219ENST00000493335 MAP9Q49MG5 647 aa16.62■□□□□ 0.25
SMTN-219ENST00000493335 IFIT1BQ5T764 474 aaKnown RBP16.62■□□□□ 0.25
SMTN-219ENST00000493335 TRIM47Q96LD4 638 aa16.62■□□□□ 0.25
SMTN-219ENST00000493335 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 IDEP14735 1019 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 MAGEA9P43362 315 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 PPARAQ07869 468 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 TUBB2AQ13885 445 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 OR8K1Q8NGG5 319 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.254e-6■■■■□ 20.8
SMTN-219ENST00000493335 TUBB2BQ9BVA1 445 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 REXO2Q9Y3B8 237 aaKnown RBP16.61■□□□□ 0.25
SMTN-219ENST00000493335 PLEKHG2Q9H7P9 1386 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 CSF1RP07333 972 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 UQCRFS1P1P0C7P4 283 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 CYP7A1P22680 504 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 PRCPP42785 496 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 TMOD3Q9NYL9 352 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 MKRN1Q9UHC7 482 aaKnown RBP16.61■□□□□ 0.25
SMTN-219ENST00000493335 JRKLQ9Y4A0 524 aa16.61■□□□□ 0.25
SMTN-219ENST00000493335 SYF2O95926 243 aaKnown RBP16.6■□□□□ 0.25
SMTN-219ENST00000493335 USP14P54578 494 aa16.6■□□□□ 0.25
SMTN-219ENST00000493335 PUM3Q15397 648 aaKnown RBP16.6■□□□□ 0.25
SMTN-219ENST00000493335 ELOA2Q8IYF1 753 aaPredicted RBP16.6■□□□□ 0.25
SMTN-219ENST00000493335 SMCR8Q8TEV9 937 aaPredicted RBP16.6■□□□□ 0.25
SMTN-219ENST00000493335 B4DLN1 442 aa16.6■□□□□ 0.25
SMTN-219ENST00000493335 PARP1P09874 1014 aaKnown RBP16.6■□□□□ 0.25
SMTN-219ENST00000493335 CXCR5P32302 372 aa16.6■□□□□ 0.25
SMTN-219ENST00000493335 KLK7P49862 253 aa16.6■□□□□ 0.25
SMTN-219ENST00000493335 SLC7A5Q01650 507 aa16.6■□□□□ 0.25
SMTN-219ENST00000493335 CATIPQ7Z7H3 387 aa16.6■□□□□ 0.25
SMTN-219ENST00000493335 MAGEC2Q9UBF1 373 aaPredicted RBP16.6■□□□□ 0.25
SMTN-219ENST00000493335 HPCAL4Q9UM19 191 aa16.6■□□□□ 0.25
SMTN-219ENST00000493335 GOLGA6CA6NDK9 693 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 GOLGA6DP0CG33 693 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 SLC5A1P13866 664 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 STAT6P42226 847 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 SND1Q7KZF4 910 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMTN-219ENST00000493335 NLRP10Q86W26 655 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 RASGRP4Q8TDF6 673 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 LPIN2Q92539 896 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 ESR2Q92731 530 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 LACRTQ9GZZ8 138 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 AGPAT5Q9NUQ2 364 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 GOLGA6AQ9NYA3 693 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 FER1L4A9Z1Z3 1794 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 RIC1Q4ADV7 1423 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 PP2D1A8MPX8 630 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 AMPD2Q01433 879 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 SPAG1Q07617 926 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 GPATCH11Q8N954 259 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 ZNHIT6Q9NWK9 470 aaKnown RBP16.59■□□□□ 0.25
SMTN-219ENST00000493335 SMARCAL1Q9NZC9 954 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 SOS2Q07890 1332 aaPredicted RBP16.59■□□□□ 0.25
SMTN-219ENST00000493335 GOLGA6BA6NDN3 693 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 RPN1P04843 607 aaKnown RBP16.59■□□□□ 0.25
SMTN-219ENST00000493335 TMTC2Q8N394 836 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 FAM76AQ8TAV0 307 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 PPM1EQ8WY54 764 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 FERMT2Q96AC1 680 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 MTRQ99707 1265 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 SELENOOQ9BVL4 669 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 SAMM50Q9Y512 469 aa16.59■□□□□ 0.25
SMTN-219ENST00000493335 KRT86O43790 486 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 NMT2O60551 498 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 VEGFAP15692 232 aaPredicted RBP16.58■□□□□ 0.24
SMTN-219ENST00000493335 PMS1P54277 932 aaKnown RBP16.58■□□□□ 0.24
SMTN-219ENST00000493335 EZH2Q15910 746 aaKnown RBP16.58■□□□□ 0.24
SMTN-219ENST00000493335 CCDC96Q2M329 555 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 RNF41Q9H4P4 317 aaPredicted RBP16.58■□□□□ 0.24
SMTN-219ENST00000493335 PCDH11XQ9BZA7 1347 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 PCDH11YQ9BZA8 1340 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 PPFIA4O75335 1185 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 TUBB4BP68371 445 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 PKN1Q16512 942 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 TRAPPC11Q7Z392 1133 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 KRT26Q7Z3Y9 468 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 ENAHQ8N8S7 591 aaPredicted RBP16.58■□□□□ 0.24
SMTN-219ENST00000493335 COG1Q8WTW3 980 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 STAG1Q8WVM7 1258 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 RNF26Q9BY78 433 aaPredicted RBP16.58■□□□□ 0.24
SMTN-219ENST00000493335 HAUS4Q9H6D7 363 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 KAT14Q9H8E8 782 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 LIMA1Q9UHB6 759 aaKnown RBP16.58■□□□□ 0.24
SMTN-219ENST00000493335 RWDD2AQ9UIY3 292 aa16.58■□□□□ 0.24
SMTN-219ENST00000493335 RGPD5Q99666 1765 aa16.57■□□□□ 0.24
SMTN-219ENST00000493335 RCCD1A6NED2 376 aa16.57■□□□□ 0.24
SMTN-219ENST00000493335 NAP1L1P55209 391 aaKnown RBP16.57■□□□□ 0.24
SMTN-219ENST00000493335 SH3RF1Q7Z6J0 888 aa16.57■□□□□ 0.24
SMTN-219ENST00000493335 BANK1Q8NDB2 785 aa16.57■□□□□ 0.24
SMTN-219ENST00000493335 MYO1AQ9UBC5 1043 aa16.57■□□□□ 0.24
SMTN-219ENST00000493335 ZPR1O75312 459 aa16.57■□□□□ 0.24
SMTN-219ENST00000493335 HERVK_113P62684 666 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms