RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 RBM28Q9NW13 759 aaKnown RBP8.1□□□□□ -1.11
UBR4-214ENST00000486515 ZNF112Q9UJU3 913 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 TAF6LQ9Y6J9 622 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 ZHX2Q9Y6X8 837 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 BAZ2AQ9UIF9 1905 aaKnown RBP8.09□□□□□ -1.11
UBR4-214ENST00000486515 RPTORQ8N122 1335 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 PHF20L1A8MW92 1017 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 C19orf81C9J6K1 198 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 NMT2O60551 498 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 FKTNO75072 461 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 PARP1P09874 1014 aaKnown RBP8.09□□□□□ -1.11
UBR4-214ENST00000486515 XBP1P17861 261 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 INPP5BP32019 993 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 SLC1A4P43007 532 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 RCAN1P53805 252 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 EVX2Q03828 476 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 PPATQ06203 517 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 TRAF1Q13077 416 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 PABPC4Q13310 644 aaKnown RBP eCLIP8.09□□□□□ -1.111e-13■■■□□ 18.5
UBR4-214ENST00000486515 ZYXQ15942 572 aaKnown RBP8.09□□□□□ -1.11
UBR4-214ENST00000486515 RTN1Q16799 776 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 NOM1Q5C9Z4 860 aaKnown RBP8.09□□□□□ -1.11
UBR4-214ENST00000486515 NOL9Q5SY16 702 aaKnown RBP8.09□□□□□ -1.11
UBR4-214ENST00000486515 GPATCH4Q5T3I0 446 aaKnown RBP8.09□□□□□ -1.11
UBR4-214ENST00000486515 USP17L2Q6R6M4 530 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 SGMS1Q86VZ5 419 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 ERO1BQ86YB8 467 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 CDAN1Q8IWY9 1227 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 ZNF654Q8IZM8 581 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 FBXL16Q8N461 479 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 FAM184AQ8NB25 1140 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 ZNF280CQ8ND82 737 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.09□□□□□ -1.113e-24■■□□□ 11.5
UBR4-214ENST00000486515 LPAR1Q92633 364 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 KIF2CQ99661 725 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 LZTS2Q9BRK4 669 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 DNAJC18Q9H819 358 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 ELP3Q9H9T3 547 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 LY9Q9HBG7 655 aa8.09□□□□□ -1.11
UBR4-214ENST00000486515 PLIN4Q96Q06 1357 aa8.09□□□□□ -1.12
UBR4-214ENST00000486515 TRIM75PA6NK02 468 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 UBE2Q2LH0YL09 131 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 SMIM22K7EJ46 135 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 SLC10A3P09131 477 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 PTPRAP18433 802 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 ANTXR2P58335 489 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 SPP2Q13103 211 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 TRIM29Q14134 588 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 VGLL4Q14135 290 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 MAP3K11Q16584 847 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 ASPRV1Q53RT3 343 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 SLFN13Q68D06 897 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 APOA5Q6Q788 366 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 FASTKD5Q7L8L6 764 aaKnown RBP8.08□□□□□ -1.12
UBR4-214ENST00000486515 ALYREFQ86V81 257 aaKnown RBP8.08□□□□□ -1.12
UBR4-214ENST00000486515 LRRC47Q8N1G4 583 aaKnown RBP8.08□□□□□ -1.12
UBR4-214ENST00000486515 FANCBQ8NB91 859 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 CHURC1Q8WUH1 139 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 DCAF4Q8WV16 495 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 WASF1Q92558 559 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 ANKS1AQ92625 1134 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 ARMC5Q96C12 935 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 TMEM47Q9BQJ4 181 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 LARP6Q9BRS8 491 aaKnown RBP8.08□□□□□ -1.12
UBR4-214ENST00000486515 IL17RBQ9NRM6 502 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 SEC63Q9UGP8 760 aaKnown RBP8.08□□□□□ -1.12
UBR4-214ENST00000486515 SMC3Q9UQE7 1217 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 ARIH1Q9Y4X5 557 aaPredicted RBP8.08□□□□□ -1.12
UBR4-214ENST00000486515 TRIM17Q9Y577 477 aa8.08□□□□□ -1.12
UBR4-214ENST00000486515 LAMA2P24043 3122 aaKnown RBP8.07□□□□□ -1.12
UBR4-214ENST00000486515 F5H6K3 240 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 PDIA4P13667 645 aaKnown RBP8.07□□□□□ -1.12
UBR4-214ENST00000486515 PDIA3P30101 505 aaKnown RBP8.07□□□□□ -1.12
UBR4-214ENST00000486515 GTF2A2P52657 109 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 CCT2P78371 535 aaKnown RBP8.07□□□□□ -1.12
UBR4-214ENST00000486515 HMGN5P82970 282 aaKnown RBP8.07□□□□□ -1.12
UBR4-214ENST00000486515 KLRC3Q07444 240 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 SSRP1Q08945 709 aaKnown RBP8.07□□□□□ -1.12
UBR4-214ENST00000486515 SNAPC2Q13487 334 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 MTMR2Q13614 643 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 TOB2Q14106 344 aaPredicted RBP8.07□□□□□ -1.12
UBR4-214ENST00000486515 SEC23AQ15436 765 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 OTUD7BQ6GQQ9 843 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 RCSD1Q6JBY9 416 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 SAMD1Q6SPF0 538 aaPredicted RBP8.07□□□□□ -1.12
UBR4-214ENST00000486515 GADL1Q6ZQY3 521 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 CCDC83Q8IWF9 413 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 CCDC144CPQ8IYA2 1237 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 GMCL1P1Q8NEA9 526 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 MKL1Q969V6 931 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 OPTNQ96CV9 577 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 TMX3Q96JJ7 454 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 MAP3K14Q99558 947 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 WDR18Q9BV38 432 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 AGXT2Q9BYV1 514 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 TANGO6Q9C0B7 1094 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 KIAA1683Q9H0B3 1180 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 VCPKMTQ9H867 229 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 TPCN1Q9ULQ1 816 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 FZD1Q9UP38 647 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms