RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 PRDM11Q9NQV5 511 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 ARHGAP31Q2M1Z3 1444 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 ATP10DQ9P241 1426 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 MYO5BQ9ULV0 1848 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 MMP20O60882 483 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 F2P00734 622 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 TRIM27P14373 513 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 BMP6P22004 513 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 MAN1A1P33908 653 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 PDE6BP35913 854 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 FAAP100Q0VG06 881 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 PICALMQ13492 652 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 ACBD5Q5T8D3 534 aaPredicted RBP8.55□□□□□ -1.04
LRCH3-215ENST00000476664 CLUHP3Q96NS8 147 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 EMILIN2Q9BXX0 1053 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 PIK3R4Q99570 1358 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 C1orf167Q5SNV9 1468 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 PLCH1Q4KWH8 1693 aa8.55□□□□□ -1.04
LRCH3-215ENST00000476664 ZFYVE9O95405 1425 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 ADAMTS13Q76LX8 1427 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 PTPRUQ92729 1446 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 ADGRL3Q9HAR2 1447 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 RPRD2Q5VT52 1461 aaKnown RBP8.54□□□□□ -1.04
LRCH3-215ENST00000476664 TRBV23-1A0A0A0MS06 115 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 TRAV20A0A0B4J274 112 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 GRIN3BO60391 1043 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 PSAPP07602 524 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 SOX18P35713 384 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 STAT4Q14765 748 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 WDR44Q5JSH3 913 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 SPICE1Q8N0Z3 855 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 GPATCH11Q8N954 259 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 TMEM102Q8N9M5 508 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-215ENST00000476664 MARVELD3Q96A59 401 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 HS3ST6Q96QI5 342 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 ORAI2Q96SN7 254 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 TMX4Q9H1E5 349 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-215ENST00000476664 PPCSQ9HAB8 311 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 FBRSQ9HAH7 460 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 JADE2Q9NQC1 790 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 USP25Q9UHP3 1055 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 TAGLN3Q9UI15 199 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 POLR3KQ9Y2Y1 108 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-215ENST00000476664 WASF2Q9Y6W5 498 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 NWD2Q9ULI1 1742 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 EHBP1L1Q8N3D4 1523 aa8.54□□□□□ -1.04
LRCH3-215ENST00000476664 CCDC18Q5T9S5 1454 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 AATKQ6ZMQ8 1374 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 A0A1W2PNR3 127 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 WNT7AO00755 349 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 ZIC2O95409 532 aaPredicted RBP8.53□□□□□ -1.04
LRCH3-215ENST00000476664 RARAP10276 462 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 NAT2P11245 290 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 ZSCAN20P17040 1043 aaPredicted RBP8.53□□□□□ -1.04
LRCH3-215ENST00000476664 SDSP20132 328 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 DGKGP49619 791 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 CCINQ13939 588 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 MAPRE1Q15691 268 aaKnown RBP8.53□□□□□ -1.04
LRCH3-215ENST00000476664 FOXB2Q5VYV0 432 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 INTS3Q68E01 1043 aaKnown RBP8.53□□□□□ -1.04
LRCH3-215ENST00000476664 KIAA1211LQ6NV74 962 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 SCUBE1Q8IWY4 988 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 JPH3Q8WXH2 748 aaPredicted RBP8.53□□□□□ -1.04
LRCH3-215ENST00000476664 SLC7A3Q8WY07 619 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 KCTD12Q96CX2 325 aaKnown RBP8.53□□□□□ -1.04
LRCH3-215ENST00000476664 ITPKCQ96DU7 683 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.53□□□□□ -1.04
LRCH3-215ENST00000476664 ANTXR1Q9H6X2 564 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 LUC7LQ9NQ29 371 aaKnown RBP8.53□□□□□ -1.04
LRCH3-215ENST00000476664 OBP2AQ9NY56 170 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 NALCNQ8IZF0 1738 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 USP32Q8NFA0 1604 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 NOS1P29475 1434 aa8.53□□□□□ -1.04
LRCH3-215ENST00000476664 WDR90Q96KV7 1748 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 MTUS2Q5JR59 1369 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 CCNB3Q8WWL7 1395 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 PTPN23Q9H3S7 1636 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 EIF2AK4Q9P2K8 1649 aaKnown RBP8.52□□□□□ -1.05
LRCH3-215ENST00000476664 A0A1B0GTH6 734 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 METTL12A8MUP2 240 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 ABLIM3O94929 683 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 POU3F2P20265 443 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-215ENST00000476664 SLC7A5Q01650 507 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 HSP90AA2PQ14568 343 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-215ENST00000476664 SETDB1Q15047 1291 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 FAM209AQ5JX71 171 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 UNC5AQ6ZN44 842 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 KRT25Q7Z3Z0 450 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 MYRIPQ8NFW9 859 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 ASAP3Q8TDY4 903 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 GAL3ST3Q96A11 431 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 MTA3Q9BTC8 594 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 CCDC8Q9H0W5 538 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-215ENST00000476664 ATG3Q9NT62 314 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 TRHDEQ9UKU6 1024 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 KCNH4Q9UQ05 1017 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 RPS6KL1Q9Y6S9 549 aa8.52□□□□□ -1.05
LRCH3-215ENST00000476664 VSTM5A8MXK1 200 aa8.51□□□□□ -1.05
LRCH3-215ENST00000476664 CT47B1P0C2W7 299 aaPredicted RBP8.51□□□□□ -1.05
LRCH3-215ENST00000476664 COL6A1P12109 1028 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms